Gene Symbol |
AAAS |
Entrez Gene ID |
467003 |
Full Name |
aladin WD repeat nucleoporin |
Synonyms |
aladin |
General protein information |
- Preferred Names
aladin WD repeat nucleoporin
Names
aladin achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A)
|
Gene Type |
protein-coding |
Organism |
Pan troglodytes(chimpanzee) |
Homo sapiens (human) |
AAAS |
NP_056480.1 |
Bos taurus (cattle) |
AAAS |
NP_001068737.1 |
Mus musculus (house mouse) |
Aaas |
NP_700465.2 |
Rattus norvegicus (Norway rat) |
Aaas |
NP_001100265.1 |
Danio rerio (zebrafish) |
aaas |
NP_998390.1 |
Oryza sativa (rice) |
Os11g0132700 |
NP_001065665.1 |
Xenopus tropicalis (tropical clawed frog) |
aaas |
XP_002936677.1 |
Canis lupus familiaris (dog) |
AAAS |
XP_849797.3 |
Drosophila melanogaster (fruit fly) |
CG16892 |
NP_572557.1 |
Pan troglodytes (chimpanzee) |
AAAS |
NP_001233360.1 |
Gallus gallus (chicken) |
AAAS |
XP_003643473.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP010685 |
XP_311401.4 |
Arabidopsis thaliana (thale cress) |
AT3G56900 |
NP_191249.2 |
Related articles in PubMed
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following AAAS gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AAAS cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OPc01250 |
Clone ID Related Accession (Same CDS sequence) |
NM_001246431.2
|
Accession Version |
NM_001246431.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1641bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-20 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
aladin |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305100.1. On Aug 31, 2012 this sequence version replaced NM_001246431.1.
##Evidence-Data-START##
Transcript exon combination :: AK305100.1, DC529290.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGGTCC AGCTGCTGCT TGCGTGTCTT TGCATGGCAC CCCCACACCA ACAAGTTTGC AGTGGCCCTG CTAGATGACT CAGTCCGTGT GTATAATGCC AGCAGCACCA TAGTCCCCTC CCTGAAGCAC CGGCTGCAGC GAAATGTGGC GTCTCTGGCC TGGAAGCCCC TTAGTGCCTC TGTCTTGGCT GTGGCCTGCC AGAGCTGCAT TCTTATCTGG ACCCTGGACC CTACCTCCTT GTCTACCCGA CCCTCTTCTG GCTGTGCCCA AGTGCTGTCT CACCCTGGGC ATACACCTGT TACCAGCTTG GCCTGGGCCC CCAGTGGGGG GCGGCTGCTC TCAGCTTCAC CCGTGGATGC TGCTATCCGG GTATGGGATG TCTCAACAGA GACCTGTGTC CCCCTTCCCT GGTTTCGAGG AGGTGGGGTG ACCAACCTGC TCTGGTCCCC AGACGGCAGC AAAATCCTGG CTACCACTCC TTCAGCTGTC TTTCGAGTCT GGGAGGCCCA GATGTGGACT TGTGAGAGGT GGCCTACTCT ATCAGGGCGC TGTCAGACTG GCTGCTGGAG CCCAGATGGC AGCCGACTGC TGTTCACTGT ATTGGGAGAG CCACTGATTT ACTCCCTGTC TTTTCCAGAA CGTTGTGGTG AGGGAAAGGG GTGCGTTGGA GGTGCAAAGT CAGCAACGAT TGTGGCAGAT CTGTCTGAGA CAACAATACA GACACCAGAT GGTGAGGAGA GGCTTGGGGG AGAGGCTCAC TCCATGGTCT GGGACCCCAG TGGGGAACGT CTGGCTGTGC TTATGAAAGG AAACCCAAGG GTACAGGATG GTAAACCAGT CATCCTCCTT TTTCGCACTC GAAACAGCCC TGTGTTTGAG CTCCTTCCCT GTGGCATTAT CCAGGGGGAG CCAGGAGCCC AGCCCCAGCT CATCACTTTC CATCCTTCCT TCAACAAAGG GGCCCTGCTC AGTGTGGGCT GGTCCACAGG CCGAATTGCC CACATCCCGC TGTACTTTGT CAATGCCCAG TTTCCACGTT TTAGCCCAGT GCTTGGGCGG GCCCAGGAAC CCCCCGCTGG GGGTGGAGGC TCTATTCATG ACCTGCCCCT CTTTACTGAG ACATCCCCAA CCTCTGCCCC TTGGGACCCT CTCCCAGGGC CACCACCTGT TCTGCCCCAC TCCCCACATT CCCACCTCTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001233360.1 |
CDS | 90..1730 |
Translation | |
Target ORF information:
RefSeq Version | NM_001246431.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes aladin WD repeat nucleoporin (AAAS), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001246431.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGGTCC AGCTGCTGCT TGCGTGTCTT TGCATGGCAC CCCCACACCA ACAAGTTTGC AGTGGCCCTG CTAGATGACT CAGTCCGTGT GTATAATGCC AGCAGCACCA TAGTCCCCTC CCTGAAGCAC CGGCTGCAGC GAAATGTGGC GTCTCTGGCC TGGAAGCCCC TTAGTGCCTC TGTCTTGGCT GTGGCCTGCC AGAGCTGCAT TCTTATCTGG ACCCTGGACC CTACCTCCTT GTCTACCCGA CCCTCTTCTG GCTGTGCCCA AGTGCTGTCT CACCCTGGGC ATACACCTGT TACCAGCTTG GCCTGGGCCC CCAGTGGGGG GCGGCTGCTC TCAGCTTCAC CCGTGGATGC TGCTATCCGG GTATGGGATG TCTCAACAGA GACCTGTGTC CCCCTTCCCT GGTTTCGAGG AGGTGGGGTG ACCAACCTGC TCTGGTCCCC AGACGGCAGC AAAATCCTGG CTACCACTCC TTCAGCTGTC TTTCGAGTCT GGGAGGCCCA GATGTGGACT TGTGAGAGGT GGCCTACTCT ATCAGGGCGC TGTCAGACTG GCTGCTGGAG CCCAGATGGC AGCCGACTGC TGTTCACTGT ATTGGGAGAG CCACTGATTT ACTCCCTGTC TTTTCCAGAA CGTTGTGGTG AGGGAAAGGG GTGCGTTGGA GGTGCAAAGT CAGCAACGAT TGTGGCAGAT CTGTCTGAGA CAACAATACA GACACCAGAT GGTGAGGAGA GGCTTGGGGG AGAGGCTCAC TCCATGGTCT GGGACCCCAG TGGGGAACGT CTGGCTGTGC TTATGAAAGG AAACCCAAGG GTACAGGATG GTAAACCAGT CATCCTCCTT TTTCGCACTC GAAACAGCCC TGTGTTTGAG CTCCTTCCCT GTGGCATTAT CCAGGGGGAG CCAGGAGCCC AGCCCCAGCT CATCACTTTC CATCCTTCCT TCAACAAAGG GGCCCTGCTC AGTGTGGGCT GGTCCACAGG CCGAATTGCC CACATCCCGC TGTACTTTGT CAATGCCCAG TTTCCACGTT TTAGCCCAGT GCTTGGGCGG GCCCAGGAAC CCCCCGCTGG GGGTGGAGGC TCTATTCATG ACCTGCCCCT CTTTACTGAG ACATCCCCAA CCTCTGCCCC TTGGGACCCT CTCCCAGGGC CACCACCTGT TCTGCCCCAC TCCCCACATT CCCACCTCTA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc43092 |
Clone ID Related Accession (Same CDS sequence) |
XM_009425244.1
|
Accession Version |
XM_009425244.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1683bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
aladin isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGGTCC AGCTGCTGCT TGCGTGTCTT TGCATGGCAC CCCCACACCA ACAAGTTTGC AGTGGCCCTG CTAGATGACT CAGTCCGTGT GTATAATGCC AGCAGCACCA TAGTCCCCTC CCTGAAGCAC CGGCTGCAGC GAAATGTGGC GTCTCTGGCC TGGAAGCCCC TTAGTGCCTC TGTCTTGGCT GTGGCCTGCC AGAGCTGCAT TCTTATCTGG ACCCTGGACC CTACCTCCTT GTCTACCCGA CCCTCTTCTG GCTGTGCCCA AGTGCTGTCT CACCCTGGGC ATACACCTGT TACCAGCTTG GCCTGGGCCC CCAGTGGGGG GCGGCTGCTC TCAGCTTCAC CCGTGGATGC TGCTATCCGG GTATGGGATG TCTCAACAGA GACCTGTGTC CCCCTTCCCT GGTTTCGAGG AGGTGGGGTG ACCAACCTGC TCTGGTCCCC AGACGGCAGC AAAATCCTGG CTACCACTCC TTCAGCTGTC TTTCGAGTCT GGGAGGCCCA GATGTGGACT TGTGAGAGGT GGCCTACTCT ATCAGGGCGC TGTCAGACTG GCTGCTGGAG CCCAGATGGC AGCCGACTGC TGTTCACTGT ATTGGGAGAG CCACTGATTT ACTCCCTGTC TTTTCCAGAA CGTTGTGGTG AGGGAAAGGG GTGCGTTGGA GGTGCAAAGT CAGCAACGAT TGTGGCAGAT CTGTCTGAGA CAACAATACA GACACCAGAT GGTGAGGAGA GGCTTGGGGG AGAGGCTCAC TCCATGGTCT GGGACCCCAG TGGGGAACGT CTGGCTGTGC TTATGAAAGG AAACCCAAGG GTACAGGATG GTAAACCAGT CATCCTCCTT TTTCGCACTC GAAACAGCCC TGTGTTTGAG CTCCTTCCCT GCTCCCTTCT CGCCTCCGGT TGCCTGCTCA CCTTTTCTTC TAGTGGCATT ATCCAGGGGG AGCCAGGAGC CCAGCCCCAG CTCATCACTT TCCATCCTTC CTTCAACAAA GGGGCCCTGC TCAGTGTGGG CTGGTCCACA GGCCGAATTG CCCACATCCC GCTGTACTTT GTCAATGCCC AGTTTCCACG TTTTAGCCCA GTGCTTGGGC GGGCCCAGGA ACCCCCCGCT GGGGGTGGAG GCTCTATTCA TGACCTGCCC CTCTTTACTG AGACATCCCC AACCTCTGCC CCTTGGGACC CTCTCCCAGG GCCACCACCT GTTCTGCCCC ACTCCCCACA TTCCCACCTC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009423519.1 |
CDS | 163..1845 |
Translation | |
Target ORF information:
RefSeq Version | XM_009425244.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes aladin WD repeat nucleoporin (AAAS), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009425244.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGGTCC AGCTGCTGCT TGCGTGTCTT TGCATGGCAC CCCCACACCA ACAAGTTTGC AGTGGCCCTG CTAGATGACT CAGTCCGTGT GTATAATGCC AGCAGCACCA TAGTCCCCTC CCTGAAGCAC CGGCTGCAGC GAAATGTGGC GTCTCTGGCC TGGAAGCCCC TTAGTGCCTC TGTCTTGGCT GTGGCCTGCC AGAGCTGCAT TCTTATCTGG ACCCTGGACC CTACCTCCTT GTCTACCCGA CCCTCTTCTG GCTGTGCCCA AGTGCTGTCT CACCCTGGGC ATACACCTGT TACCAGCTTG GCCTGGGCCC CCAGTGGGGG GCGGCTGCTC TCAGCTTCAC CCGTGGATGC TGCTATCCGG GTATGGGATG TCTCAACAGA GACCTGTGTC CCCCTTCCCT GGTTTCGAGG AGGTGGGGTG ACCAACCTGC TCTGGTCCCC AGACGGCAGC AAAATCCTGG CTACCACTCC TTCAGCTGTC TTTCGAGTCT GGGAGGCCCA GATGTGGACT TGTGAGAGGT GGCCTACTCT ATCAGGGCGC TGTCAGACTG GCTGCTGGAG CCCAGATGGC AGCCGACTGC TGTTCACTGT ATTGGGAGAG CCACTGATTT ACTCCCTGTC TTTTCCAGAA CGTTGTGGTG AGGGAAAGGG GTGCGTTGGA GGTGCAAAGT CAGCAACGAT TGTGGCAGAT CTGTCTGAGA CAACAATACA GACACCAGAT GGTGAGGAGA GGCTTGGGGG AGAGGCTCAC TCCATGGTCT GGGACCCCAG TGGGGAACGT CTGGCTGTGC TTATGAAAGG AAACCCAAGG GTACAGGATG GTAAACCAGT CATCCTCCTT TTTCGCACTC GAAACAGCCC TGTGTTTGAG CTCCTTCCCT GCTCCCTTCT CGCCTCCGGT TGCCTGCTCA CCTTTTCTTC TAGTGGCATT ATCCAGGGGG AGCCAGGAGC CCAGCCCCAG CTCATCACTT TCCATCCTTC CTTCAACAAA GGGGCCCTGC TCAGTGTGGG CTGGTCCACA GGCCGAATTG CCCACATCCC GCTGTACTTT GTCAATGCCC AGTTTCCACG TTTTAGCCCA GTGCTTGGGC GGGCCCAGGA ACCCCCCGCT GGGGGTGGAG GCTCTATTCA TGACCTGCCC CTCTTTACTG AGACATCCCC AACCTCTGCC CCTTGGGACC CTCTCCCAGG GCCACCACCT GTTCTGCCCC ACTCCCCACA TTCCCACCTC TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc43093 |
Clone ID Related Accession (Same CDS sequence) |
XM_009425245.1
|
Accession Version |
XM_009425245.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1584bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
aladin isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGCACC ATAGTCCCCT CCCTGAAGCA CCGGCTGCAG CGAAATGTGG CGTCTCTGGC CTGGAAGCCC CTTAGTGCCT CTGTCTTGGC TGTGGCCTGC CAGAGCTGCA TTCTTATCTG GACCCTGGAC CCTACCTCCT TGTCTACCCG ACCCTCTTCT GGCTGTGCCC AAGTGCTGTC TCACCCTGGG CATACACCTG TTACCAGCTT GGCCTGGGCC CCCAGTGGGG GGCGGCTGCT CTCAGCTTCA CCCGTGGATG CTGCTATCCG GGTATGGGAT GTCTCAACAG AGACCTGTGT CCCCCTTCCC TGGTTTCGAG GAGGTGGGGT GACCAACCTG CTCTGGTCCC CAGACGGCAG CAAAATCCTG GCTACCACTC CTTCAGCTGT CTTTCGAGTC TGGGAGGCCC AGATGTGGAC TTGTGAGAGG TGGCCTACTC TATCAGGGCG CTGTCAGACT GGCTGCTGGA GCCCAGATGG CAGCCGACTG CTGTTCACTG TATTGGGAGA GCCACTGATT TACTCCCTGT CTTTTCCAGA ACGTTGTGGT GAGGGAAAGG GGTGCGTTGG AGGTGCAAAG TCAGCAACGA TTGTGGCAGA TCTGTCTGAG ACAACAATAC AGACACCAGA TGGTGAGGAG AGGCTTGGGG GAGAGGCTCA CTCCATGGTC TGGGACCCCA GTGGGGAACG TCTGGCTGTG CTTATGAAAG GAAACCCAAG GGTACAGGAT GGTAAACCAG TCATCCTCCT TTTTCGCACT CGAAACAGCC CTGTGTTTGA GCTCCTTCCC TGCTCCCTTC TCGCCTCCGG TTGCCTGCTC ACCTTTTCTT CTAGTGGCAT TATCCAGGGG GAGCCAGGAG CCCAGCCCCA GCTCATCACT TTCCATCCTT CCTTCAACAA AGGGGCCCTG CTCAGTGTGG GCTGGTCCAC AGGCCGAATT GCCCACATCC CGCTGTACTT TGTCAATGCC CAGTTTCCAC GTTTTAGCCC AGTGCTTGGG CGGGCCCAGG AACCCCCCGC TGGGGGTGGA GGCTCTATTC ATGACCTGCC CCTCTTTACT GAGACATCCC CAACCTCTGC CCCTTGGGAC CCTCTCCCAG GGCCACCACC TGTTCTGCCC CACTCCCCAC ATTCCCACCT CTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009423520.1 |
CDS | 163..1746 |
Translation | |
Target ORF information:
RefSeq Version | XM_009425245.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes aladin WD repeat nucleoporin (AAAS), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009425245.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGCACC ATAGTCCCCT CCCTGAAGCA CCGGCTGCAG CGAAATGTGG CGTCTCTGGC CTGGAAGCCC CTTAGTGCCT CTGTCTTGGC TGTGGCCTGC CAGAGCTGCA TTCTTATCTG GACCCTGGAC CCTACCTCCT TGTCTACCCG ACCCTCTTCT GGCTGTGCCC AAGTGCTGTC TCACCCTGGG CATACACCTG TTACCAGCTT GGCCTGGGCC CCCAGTGGGG GGCGGCTGCT CTCAGCTTCA CCCGTGGATG CTGCTATCCG GGTATGGGAT GTCTCAACAG AGACCTGTGT CCCCCTTCCC TGGTTTCGAG GAGGTGGGGT GACCAACCTG CTCTGGTCCC CAGACGGCAG CAAAATCCTG GCTACCACTC CTTCAGCTGT CTTTCGAGTC TGGGAGGCCC AGATGTGGAC TTGTGAGAGG TGGCCTACTC TATCAGGGCG CTGTCAGACT GGCTGCTGGA GCCCAGATGG CAGCCGACTG CTGTTCACTG TATTGGGAGA GCCACTGATT TACTCCCTGT CTTTTCCAGA ACGTTGTGGT GAGGGAAAGG GGTGCGTTGG AGGTGCAAAG TCAGCAACGA TTGTGGCAGA TCTGTCTGAG ACAACAATAC AGACACCAGA TGGTGAGGAG AGGCTTGGGG GAGAGGCTCA CTCCATGGTC TGGGACCCCA GTGGGGAACG TCTGGCTGTG CTTATGAAAG GAAACCCAAG GGTACAGGAT GGTAAACCAG TCATCCTCCT TTTTCGCACT CGAAACAGCC CTGTGTTTGA GCTCCTTCCC TGCTCCCTTC TCGCCTCCGG TTGCCTGCTC ACCTTTTCTT CTAGTGGCAT TATCCAGGGG GAGCCAGGAG CCCAGCCCCA GCTCATCACT TTCCATCCTT CCTTCAACAA AGGGGCCCTG CTCAGTGTGG GCTGGTCCAC AGGCCGAATT GCCCACATCC CGCTGTACTT TGTCAATGCC CAGTTTCCAC GTTTTAGCCC AGTGCTTGGG CGGGCCCAGG AACCCCCCGC TGGGGGTGGA GGCTCTATTC ATGACCTGCC CCTCTTTACT GAGACATCCC CAACCTCTGC CCCTTGGGAC CCTCTCCCAG GGCCACCACC TGTTCTGCCC CACTCCCCAC ATTCCCACCT CTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc43094 |
Clone ID Related Accession (Same CDS sequence) |
XM_009425246.1
|
Accession Version |
XM_009425246.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1542bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
aladin isoform X3 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGCACC ATAGTCCCCT CCCTGAAGCA CCGGCTGCAG CGAAATGTGG CGTCTCTGGC CTGGAAGCCC CTTAGTGCCT CTGTCTTGGC TGTGGCCTGC CAGAGCTGCA TTCTTATCTG GACCCTGGAC CCTACCTCCT TGTCTACCCG ACCCTCTTCT GGCTGTGCCC AAGTGCTGTC TCACCCTGGG CATACACCTG TTACCAGCTT GGCCTGGGCC CCCAGTGGGG GGCGGCTGCT CTCAGCTTCA CCCGTGGATG CTGCTATCCG GGTATGGGAT GTCTCAACAG AGACCTGTGT CCCCCTTCCC TGGTTTCGAG GAGGTGGGGT GACCAACCTG CTCTGGTCCC CAGACGGCAG CAAAATCCTG GCTACCACTC CTTCAGCTGT CTTTCGAGTC TGGGAGGCCC AGATGTGGAC TTGTGAGAGG TGGCCTACTC TATCAGGGCG CTGTCAGACT GGCTGCTGGA GCCCAGATGG CAGCCGACTG CTGTTCACTG TATTGGGAGA GCCACTGATT TACTCCCTGT CTTTTCCAGA ACGTTGTGGT GAGGGAAAGG GGTGCGTTGG AGGTGCAAAG TCAGCAACGA TTGTGGCAGA TCTGTCTGAG ACAACAATAC AGACACCAGA TGGTGAGGAG AGGCTTGGGG GAGAGGCTCA CTCCATGGTC TGGGACCCCA GTGGGGAACG TCTGGCTGTG CTTATGAAAG GAAACCCAAG GGTACAGGAT GGTAAACCAG TCATCCTCCT TTTTCGCACT CGAAACAGCC CTGTGTTTGA GCTCCTTCCC TGTGGCATTA TCCAGGGGGA GCCAGGAGCC CAGCCCCAGC TCATCACTTT CCATCCTTCC TTCAACAAAG GGGCCCTGCT CAGTGTGGGC TGGTCCACAG GCCGAATTGC CCACATCCCG CTGTACTTTG TCAATGCCCA GTTTCCACGT TTTAGCCCAG TGCTTGGGCG GGCCCAGGAA CCCCCCGCTG GGGGTGGAGG CTCTATTCAT GACCTGCCCC TCTTTACTGA GACATCCCCA ACCTCTGCCC CTTGGGACCC TCTCCCAGGG CCACCACCTG TTCTGCCCCA CTCCCCACAT TCCCACCTCT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009423521.1 |
CDS | 163..1704 |
Translation | |
Target ORF information:
RefSeq Version | XM_009425246.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes aladin WD repeat nucleoporin (AAAS), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009425246.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501
| ATGTGCTCTA TGGGGTTGTT CCCTCCTCCA CCGCCTCGGG GTCAAGTCAC CCTATATGAG CACAATAACG AGCTGGTGAC GGGCAGTAGC TATGAGAGCC CGCCCCCCGA CTTCCGGGGC CAGTGGATCA ATCTTCCTGT CCTACAACTG ACCAAGGATC CCCTAAAGAC CCCTGGAAGG CTGGACCATG GCACAAGAAC TGCCTTCATC CATCACCGGG AGCAAGTGTG GAAGAGATGC ATCAACATTT GGCGTGATGT GGGCCTTTTT GGGGTGCTAA ATGAAATTGC AAACTCAGAA GAAGAGGTGT TTGAGTGGGT GAAGACGGCA TCCGGCTGGG CCCTGGCACT CTGTCGATGG GCCTCTTCCC TCCATGGGTC CCTGTTCCCC CATCTCTCTC TCAGGAGCGA AGATCTGATC GCTGAATTTG CCCAAGTCAC AAATTGCACC ATAGTCCCCT CCCTGAAGCA CCGGCTGCAG CGAAATGTGG CGTCTCTGGC CTGGAAGCCC CTTAGTGCCT CTGTCTTGGC TGTGGCCTGC CAGAGCTGCA TTCTTATCTG GACCCTGGAC CCTACCTCCT TGTCTACCCG ACCCTCTTCT GGCTGTGCCC AAGTGCTGTC TCACCCTGGG CATACACCTG TTACCAGCTT GGCCTGGGCC CCCAGTGGGG GGCGGCTGCT CTCAGCTTCA CCCGTGGATG CTGCTATCCG GGTATGGGAT GTCTCAACAG AGACCTGTGT CCCCCTTCCC TGGTTTCGAG GAGGTGGGGT GACCAACCTG CTCTGGTCCC CAGACGGCAG CAAAATCCTG GCTACCACTC CTTCAGCTGT CTTTCGAGTC TGGGAGGCCC AGATGTGGAC TTGTGAGAGG TGGCCTACTC TATCAGGGCG CTGTCAGACT GGCTGCTGGA GCCCAGATGG CAGCCGACTG CTGTTCACTG TATTGGGAGA GCCACTGATT TACTCCCTGT CTTTTCCAGA ACGTTGTGGT GAGGGAAAGG GGTGCGTTGG AGGTGCAAAG TCAGCAACGA TTGTGGCAGA TCTGTCTGAG ACAACAATAC AGACACCAGA TGGTGAGGAG AGGCTTGGGG GAGAGGCTCA CTCCATGGTC TGGGACCCCA GTGGGGAACG TCTGGCTGTG CTTATGAAAG GAAACCCAAG GGTACAGGAT GGTAAACCAG TCATCCTCCT TTTTCGCACT CGAAACAGCC CTGTGTTTGA GCTCCTTCCC TGTGGCATTA TCCAGGGGGA GCCAGGAGCC CAGCCCCAGC TCATCACTTT CCATCCTTCC TTCAACAAAG GGGCCCTGCT CAGTGTGGGC TGGTCCACAG GCCGAATTGC CCACATCCCG CTGTACTTTG TCAATGCCCA GTTTCCACGT TTTAGCCCAG TGCTTGGGCG GGCCCAGGAA CCCCCCGCTG GGGGTGGAGG CTCTATTCAT GACCTGCCCC TCTTTACTGA GACATCCCCA ACCTCTGCCC CTTGGGACCC TCTCCCAGGG CCACCACCTG TTCTGCCCCA CTCCCCACAT TCCCACCTCT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Functional & integrative genomics11(3)507-17(2011 Sep)
Kim RN,Kim DW,Choi SH,Chae SH,Nam SH,Kim DW,Kim A,Kang A,Park KH,Lee YS,Hirai M,Suzuki Y,Sugano S,Hashimoto K,Kim DS,Park HS |