ORF » Species Summary » Populus trichocarpa » LOC7493521 cDNA ORF clone

LOC7493521 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7493521 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7493521 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27248 XM_002317876.2
Latest version!		 Populus trichocarpa C2 domain-containing family protein (POPTR_0012s05250g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
OPa440855 XM_002317876.3
Latest version!		 Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa440856 XM_024582551.1
Latest version!		 Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7493521 ( XM_002317876.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317912.1 Populus trichocarpa C2 domain-containing family protein (POPTR_0012s05250g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27248
    Clone ID Related Accession (Same CDS sequence) XM_002317876.2
    Accession Version XM_002317876.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2460bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product C2 domain-containing family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008478). On Dec 16, 2013 this sequence version replaced XM_002317876.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGTATTG CAGTCATCAA CAGAAAGTTA TTGTGGAAGA CCTAAACAAA 
    AAGTGGAAGC GAGTTGTATT GAACACCTCG CCAATAACAC CATTGGAACA CTGTGAGTGG 
    CTGAACAAGC TGTTGATGGA AATTTGGATG AACTATATGA ACCCAAAGCT TGCAATAAGA 
    TTCTCATCCA TTGTTGAGAA ACGATTAAAA CAACAAAGGT TGAAGCTCAT GGAAAAACTC 
    GAGTTGCAGG AATTTTCACT TGGTTCATGC CCACCATCCC TTGGTCTTCA TGGGACTCGC 
    TGGTCAACTT CTGGTGATCA GAGAATTATG CATTTGGGAT TTGATTGGGA CTCCAAAGAC 
    ATGAGCATTT TGTTGCTGGC TAAGCTGGCA AAGCCATTAA TGGGAACTGC TCGGATTGTT 
    ATAAACAGCC TCCACATCAA GGGTGAGCTT CTCTTGATGC CAGTTCTGGA TGGGAGAGCG 
    GTTTTGTACT CATTTGTGTC AATTCCTGAA GTAAGAATAG GAGTTGCCTT TGGAAGTGGA 
    GGAAGCCAGT CATTACCTGC CACCGAGCTG CCAGGCGTTT CTTCTTGGCT GGTTAAGGTT 
    TTCACTGACA CCTTAGTCAA GACAATGATT GAGCCTCGCC GTCGTTGTTT CAGCTTACCA 
    GCAGTAGATT TAAGGAAAAA GGCTGTTGGT GGAATTGTAT ACGTGTCAGT CATCTCAGCT 
    AGCAAACTTT CTAGAAGTAA CCTGAGAGGA AGTCCGCCAA GAAGGGTAAA TGGTAGTTTC 
    ATAGAGCATT TTGATGATAA ATATCTGCAA ACATTTGTGG AGGTCGAGCT TGGACATTTG 
    ACAAGGAGAA CAGATGTGAG ACCAGGCTCA AACCCTAGAT GGGATTCCAC ATTTAACATG 
    TTCTTACATG AAGAAACTGG AACTCTTCGA TTACATCTTT ACAACCGCCC ACCCAACAGT 
    GTGAAGTATG ATTATCTAGC AAGTTGTGAG ATCAAGATGA AGTATGTTGC TGATGATTCA 
    ACAACGTTTT GGGCAATAGG ACCCGACTCT GGTGTAATAG CCAAACATGC TGAGATTTGC 
    GGAAAAGAGG TTGAAATGGT TGTTCCATTT GAGGGAGTTA CTTCAGGGGA GTTGACAGTA 
    AAGCTTGTGG TGAAAGAATG GCTGTTCTCT GATGGTTCCC ATAGCTTGAA CAACGTTAGC 
    TCTCAGAAGT CAATATATGG ATCATCAAAT ATTCTTTCAA GAACAGGAAG GAAGATTAAC 
    GTGGCTGTCA TGGAGGGAAA AGGTCTTATT TCAAAAGAAA GATCTGGAAA GTGTGACCCA 
    TATGTTAAAC TGCAGTATGG AAAGGTCCTA CAGAAAACAC GGACTGCACA TAGCTCTAAT 
    CCTCTCTGGA ATCAGAAGTT TGAATTTGAT GAGATAGTAG ATGATAGATG CCTTAAGATT 
    AAATGCTACA GTGAAGAAAT CTTTGGAGAT GAGAGCATTG GTAGTGCACG AGTAAATTTG 
    GAAGGTTTGA TGGAGGGATT TATCAGGGAC ATGTGGGTTC CCCTTGAAAA AGTGAATACA 
    GGAGAATTAA GGCTTCAAAT AGAAGCAGTA CAAGTCAATG ACTCTGAAGG ATCACGGGGT 
    TCTATGTCAG GTTCATTCAA TGGTTTGATT GAACTTGTTC TTGTTGAAGC GAAGGATCTT 
    ATTGCTGCTG ATCTTAGGGG GACAAGTGAT CCATATGTGA GGGTGCAATA TGGAAGCTTG 
    AAGAAGAGAA CAAAGGTTAT GTACAAAACT CTGAATCCTC ATTGGAATCA AACCCTCGAG 
    TTTCCTGATG ATGGCAGTCC CTTAGAGTTG CATGTGAAAG ACTATAATGC CTTGCTGCCC 
    ACCTATAGTA TTGGTGATTG TGTTGTAGAG TATCAGGGAT TGCCTCCAAA CCAGATGTCC 
    GACAAGTGGA TTCCTCTCCA AGGAGTAACA AGGGGAGAGA TCCATGTTCG GATAACTAGG 
    AAAGTTCCAG AACTACAAGC AAGAAACAGT TTGGAGTCTG ACACATCTTT AATCAAATCA 
    CACCAAATCT CTAACCAGAT GAAACAATTG ATGATCAAGT TTCAATCTCT GATTGAGGAG 
    GGCAGCCTAG AGGGGCTCTC GACAGCTTTG AGCGAGATGC AAAGCCTAGA GGACATGCAA 
    GAAGAGTACA TGGTACAGAT TGAGACTGAG CAAATGCTTC TACTTAACAA GATAAAGGAG 
    CTTGGTCAAG AAATTATGAG CTCATCGTCT TCCTTGAGCA GAAGATCTTC TGGACTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317912.1
    CDS1..2460
    Translation

    Target ORF information:

    RefSeq Version XM_002317876.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa C2 domain-containing family protein (POPTR_0012s05250g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317876.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGTATTG CAGTCATCAA CAGAAAGTTA TTGTGGAAGA CCTAAACAAA 
    AAGTGGAAGC GAGTTGTATT GAACACCTCG CCAATAACAC CATTGGAACA CTGTGAGTGG 
    CTGAACAAGC TGTTGATGGA AATTTGGATG AACTATATGA ACCCAAAGCT TGCAATAAGA 
    TTCTCATCCA TTGTTGAGAA ACGATTAAAA CAACAAAGGT TGAAGCTCAT GGAAAAACTC 
    GAGTTGCAGG AATTTTCACT TGGTTCATGC CCACCATCCC TTGGTCTTCA TGGGACTCGC 
    TGGTCAACTT CTGGTGATCA GAGAATTATG CATTTGGGAT TTGATTGGGA CTCCAAAGAC 
    ATGAGCATTT TGTTGCTGGC TAAGCTGGCA AAGCCATTAA TGGGAACTGC TCGGATTGTT 
    ATAAACAGCC TCCACATCAA GGGTGAGCTT CTCTTGATGC CAGTTCTGGA TGGGAGAGCG 
    GTTTTGTACT CATTTGTGTC AATTCCTGAA GTAAGAATAG GAGTTGCCTT TGGAAGTGGA 
    GGAAGCCAGT CATTACCTGC CACCGAGCTG CCAGGCGTTT CTTCTTGGCT GGTTAAGGTT 
    TTCACTGACA CCTTAGTCAA GACAATGATT GAGCCTCGCC GTCGTTGTTT CAGCTTACCA 
    GCAGTAGATT TAAGGAAAAA GGCTGTTGGT GGAATTGTAT ACGTGTCAGT CATCTCAGCT 
    AGCAAACTTT CTAGAAGTAA CCTGAGAGGA AGTCCGCCAA GAAGGGTAAA TGGTAGTTTC 
    ATAGAGCATT TTGATGATAA ATATCTGCAA ACATTTGTGG AGGTCGAGCT TGGACATTTG 
    ACAAGGAGAA CAGATGTGAG ACCAGGCTCA AACCCTAGAT GGGATTCCAC ATTTAACATG 
    TTCTTACATG AAGAAACTGG AACTCTTCGA TTACATCTTT ACAACCGCCC ACCCAACAGT 
    GTGAAGTATG ATTATCTAGC AAGTTGTGAG ATCAAGATGA AGTATGTTGC TGATGATTCA 
    ACAACGTTTT GGGCAATAGG ACCCGACTCT GGTGTAATAG CCAAACATGC TGAGATTTGC 
    GGAAAAGAGG TTGAAATGGT TGTTCCATTT GAGGGAGTTA CTTCAGGGGA GTTGACAGTA 
    AAGCTTGTGG TGAAAGAATG GCTGTTCTCT GATGGTTCCC ATAGCTTGAA CAACGTTAGC 
    TCTCAGAAGT CAATATATGG ATCATCAAAT ATTCTTTCAA GAACAGGAAG GAAGATTAAC 
    GTGGCTGTCA TGGAGGGAAA AGGTCTTATT TCAAAAGAAA GATCTGGAAA GTGTGACCCA 
    TATGTTAAAC TGCAGTATGG AAAGGTCCTA CAGAAAACAC GGACTGCACA TAGCTCTAAT 
    CCTCTCTGGA ATCAGAAGTT TGAATTTGAT GAGATAGTAG ATGATAGATG CCTTAAGATT 
    AAATGCTACA GTGAAGAAAT CTTTGGAGAT GAGAGCATTG GTAGTGCACG AGTAAATTTG 
    GAAGGTTTGA TGGAGGGATT TATCAGGGAC ATGTGGGTTC CCCTTGAAAA AGTGAATACA 
    GGAGAATTAA GGCTTCAAAT AGAAGCAGTA CAAGTCAATG ACTCTGAAGG ATCACGGGGT 
    TCTATGTCAG GTTCATTCAA TGGTTTGATT GAACTTGTTC TTGTTGAAGC GAAGGATCTT 
    ATTGCTGCTG ATCTTAGGGG GACAAGTGAT CCATATGTGA GGGTGCAATA TGGAAGCTTG 
    AAGAAGAGAA CAAAGGTTAT GTACAAAACT CTGAATCCTC ATTGGAATCA AACCCTCGAG 
    TTTCCTGATG ATGGCAGTCC CTTAGAGTTG CATGTGAAAG ACTATAATGC CTTGCTGCCC 
    ACCTATAGTA TTGGTGATTG TGTTGTAGAG TATCAGGGAT TGCCTCCAAA CCAGATGTCC 
    GACAAGTGGA TTCCTCTCCA AGGAGTAACA AGGGGAGAGA TCCATGTTCG GATAACTAGG 
    AAAGTTCCAG AACTACAAGC AAGAAACAGT TTGGAGTCTG ACACATCTTT AATCAAATCA 
    CACCAAATCT CTAACCAGAT GAAACAATTG ATGATCAAGT TTCAATCTCT GATTGAGGAG 
    GGCAGCCTAG AGGGGCTCTC GACAGCTTTG AGCGAGATGC AAAGCCTAGA GGACATGCAA 
    GAAGAGTACA TGGTACAGAT TGAGACTGAG CAAATGCTTC TACTTAACAA GATAAAGGAG 
    CTTGGTCAAG AAATTATGAG CTCATCGTCT TCCTTGAGCA GAAGATCTTC TGGACTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7493521 ( XM_002317876.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317912.2 Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa440855
    Clone ID Related Accession (Same CDS sequence) XM_002317876.3
    Accession Version XM_002317876.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2460bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product synaptotagmin-4 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002317876.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGTATTG CAGTCATCAA CAGAAAGTTA TTGTGGAAGA CCTAAACAAA 
    AAGTGGAAGC GAGTTGTATT GAACACCTCG CCAATAACAC CATTGGAACA CTGTGAGTGG 
    CTGAACAAGC TGTTGATGGA AATTTGGATG AACTATATGA ACCCAAAGCT TGCAATAAGA 
    TTCTCATCCA TTGTTGAGAA ACGATTGAAA CAACAAAGGT TGAAGCTCAT GGAAAAACTC 
    GAGTTGCAGG AATTTTCACT TGGTTCATGC CCACCATCCC TTGGTCTTCA TGGGACTCGC 
    TGGTCAACTT CTGGTGATCA GAGAATTATG CATTTGGGAT TTGATTGGGA CTCCAAAGAC 
    ATGAGCATTT TGTTGCTGGC TAAGCTGGCA AAGCCATTAA TGGGAACTGC TCGGATTGTT 
    ATAAACAGCC TCCACATCAA GGGTGAGCTT CTCTTGATGC CAGTTCTGGA TGGGAGAGCG 
    GTTTTGTACT CATTTGTGTC AATTCCTGAA GTAAGAATAG GAGTTGCCTT TGGAAGTGGA 
    GGAAGCCAGT CATTACCTGC CACCGAGCTG CCAGGCGTTT CTTCTTGGCT GGTTAAGGTT 
    TTCACTGACA CCTTAGTCAA GACAATGATT GAGCCTCGCC GTCGTTGTTT CAGCTTACCA 
    GCAGTAGATT TAAGGAAAAA GGCTGTTGGT GGAATTGTAT ACGTGTCAGT CATCTCAGCT 
    AGCAAACTTT CTAGAAGTAA CCTGAGAGGA AGTCCGCCAA GAAGGGTAAA TGGTAGTTTC 
    ATAGAGCATT TTGATGATAA ATATCTGCAA ACATTTGTGG AGGTCGAGCT TGGACATTTG 
    ACAAGGAGAA CAGATGTGAG ACCAGGCTCA AACCCTAGAT GGGATTCCAC ATTTAACATG 
    TTCTTACATG AAGAAACTGG AACTCTTCGA TTACATCTTT ACAACCGCCC ACCCAACAGT 
    GTGAAGTATG ATTATCTAGC AAGTTGTGAG ATCAAGATGA AGTATGTTGC TGATGATTCA 
    ACAACGTTTT GGGCAATAGG ACCCGACTCT GGTGTAATAG CCAAACATGC TGAGATTTGC 
    GGAAAAGAGG TTGAAATGGT TGTTCCATTT GAGGGAGTTA CTTCAGGGGA GTTGACAGTA 
    AAGCTTGTGG TGAAAGAATG GCTGTTCTCT GATGGTTCCC ATAGCTTGAA CAACGTTAGC 
    TCTCAGAAGT CAATATATGG ATCATCAAAT ATTCTTTCAA GAACAGGAAG GAAGATTAAC 
    GTGGCTGTCA TGGAGGGAAA AGGTCTTATT TCAAAAGAAA GATCTGGAAA GTGTGACCCA 
    TATGTTAAAC TGCAGTATGG AAAGGTCCTA CAGAAAACAC GGACTGCACA TAGCTCTAAT 
    CCTCTCTGGA ATCAGAAGTT TGAATTTGAT GAGATAGTAG ATGATAGATG CCTTAAGATT 
    AAATGCTACA GTGAAGAAAT CTTTGGAGAT GAGAGCATTG GTAGTGCACG AGTAAATTTG 
    GAAGGTTTGA TGGAGGGATT TATCAGGGAC ATGTGGGTTC CCCTTGAAAA AGTGAATACA 
    GGAGAATTAA GGCTTCAAAT AGAAGCAGTA CAAGTCAATG ACTCTGAAGG ATCACGGGGT 
    TCTATGTCAG GTTCATTCAA TGGTTGGATT GAACTTGTTC TTGTTGAAGC GAAGGATCTT 
    ATTGCTGCTG ATCTTAGGGG GACAAGTGAT CCATATGTGA GGGTGCAATA TGGAAGCTTG 
    AAGAAGAGAA CAAAGGTTAT GTACAAAACT CTGAATCCTC ATTGGAATCA AACCCTCGAG 
    TTTCCTGATG ATGGCAGTCC CTTAGAGTTG CATGTGAAAG ACTATAATGC CTTGCTGCCC 
    ACCTATAGTA TTGGTGATTG TGTTGTAGAG TATCAGGGAT TGCCTCCAAA CCAGATGTCC 
    GACAAGTGGA TTCCTCTCCA AGGAGTAACA AGGGGAGAGA TCCATGTTCG GATAACTAGG 
    AAAGTTCCAG AACTACAAGC AAGAAACAGT TTGGAGTCTG ACACATCTTT AATCAAATCA 
    CACCAAATCT CTAACCAGAT GAAACAATTG ATGATCAAGT TTCAATCTCT GATTGAGGAG 
    GGCAGCCTAG AGGGGCTCTC GACAGCTTTG AGCGAGATGC AAAGCCTAGA GGACATGCAA 
    GAAGAGTACA TGGTACAGAT TGAGACTGAG CAAATGCTTC TACTTAACAA GATAAAGGAG 
    CTTGGTCAAG AAATTATGAG CTCATCGTCT TCCTTGAGCA GAAGATCTTC TGGACTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317912.2
    CDS83..2542
    Translation

    Target ORF information:

    RefSeq Version XM_002317876.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317876.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGTATTG CAGTCATCAA CAGAAAGTTA TTGTGGAAGA CCTAAACAAA 
    AAGTGGAAGC GAGTTGTATT GAACACCTCG CCAATAACAC CATTGGAACA CTGTGAGTGG 
    CTGAACAAGC TGTTGATGGA AATTTGGATG AACTATATGA ACCCAAAGCT TGCAATAAGA 
    TTCTCATCCA TTGTTGAGAA ACGATTGAAA CAACAAAGGT TGAAGCTCAT GGAAAAACTC 
    GAGTTGCAGG AATTTTCACT TGGTTCATGC CCACCATCCC TTGGTCTTCA TGGGACTCGC 
    TGGTCAACTT CTGGTGATCA GAGAATTATG CATTTGGGAT TTGATTGGGA CTCCAAAGAC 
    ATGAGCATTT TGTTGCTGGC TAAGCTGGCA AAGCCATTAA TGGGAACTGC TCGGATTGTT 
    ATAAACAGCC TCCACATCAA GGGTGAGCTT CTCTTGATGC CAGTTCTGGA TGGGAGAGCG 
    GTTTTGTACT CATTTGTGTC AATTCCTGAA GTAAGAATAG GAGTTGCCTT TGGAAGTGGA 
    GGAAGCCAGT CATTACCTGC CACCGAGCTG CCAGGCGTTT CTTCTTGGCT GGTTAAGGTT 
    TTCACTGACA CCTTAGTCAA GACAATGATT GAGCCTCGCC GTCGTTGTTT CAGCTTACCA 
    GCAGTAGATT TAAGGAAAAA GGCTGTTGGT GGAATTGTAT ACGTGTCAGT CATCTCAGCT 
    AGCAAACTTT CTAGAAGTAA CCTGAGAGGA AGTCCGCCAA GAAGGGTAAA TGGTAGTTTC 
    ATAGAGCATT TTGATGATAA ATATCTGCAA ACATTTGTGG AGGTCGAGCT TGGACATTTG 
    ACAAGGAGAA CAGATGTGAG ACCAGGCTCA AACCCTAGAT GGGATTCCAC ATTTAACATG 
    TTCTTACATG AAGAAACTGG AACTCTTCGA TTACATCTTT ACAACCGCCC ACCCAACAGT 
    GTGAAGTATG ATTATCTAGC AAGTTGTGAG ATCAAGATGA AGTATGTTGC TGATGATTCA 
    ACAACGTTTT GGGCAATAGG ACCCGACTCT GGTGTAATAG CCAAACATGC TGAGATTTGC 
    GGAAAAGAGG TTGAAATGGT TGTTCCATTT GAGGGAGTTA CTTCAGGGGA GTTGACAGTA 
    AAGCTTGTGG TGAAAGAATG GCTGTTCTCT GATGGTTCCC ATAGCTTGAA CAACGTTAGC 
    TCTCAGAAGT CAATATATGG ATCATCAAAT ATTCTTTCAA GAACAGGAAG GAAGATTAAC 
    GTGGCTGTCA TGGAGGGAAA AGGTCTTATT TCAAAAGAAA GATCTGGAAA GTGTGACCCA 
    TATGTTAAAC TGCAGTATGG AAAGGTCCTA CAGAAAACAC GGACTGCACA TAGCTCTAAT 
    CCTCTCTGGA ATCAGAAGTT TGAATTTGAT GAGATAGTAG ATGATAGATG CCTTAAGATT 
    AAATGCTACA GTGAAGAAAT CTTTGGAGAT GAGAGCATTG GTAGTGCACG AGTAAATTTG 
    GAAGGTTTGA TGGAGGGATT TATCAGGGAC ATGTGGGTTC CCCTTGAAAA AGTGAATACA 
    GGAGAATTAA GGCTTCAAAT AGAAGCAGTA CAAGTCAATG ACTCTGAAGG ATCACGGGGT 
    TCTATGTCAG GTTCATTCAA TGGTTGGATT GAACTTGTTC TTGTTGAAGC GAAGGATCTT 
    ATTGCTGCTG ATCTTAGGGG GACAAGTGAT CCATATGTGA GGGTGCAATA TGGAAGCTTG 
    AAGAAGAGAA CAAAGGTTAT GTACAAAACT CTGAATCCTC ATTGGAATCA AACCCTCGAG 
    TTTCCTGATG ATGGCAGTCC CTTAGAGTTG CATGTGAAAG ACTATAATGC CTTGCTGCCC 
    ACCTATAGTA TTGGTGATTG TGTTGTAGAG TATCAGGGAT TGCCTCCAAA CCAGATGTCC 
    GACAAGTGGA TTCCTCTCCA AGGAGTAACA AGGGGAGAGA TCCATGTTCG GATAACTAGG 
    AAAGTTCCAG AACTACAAGC AAGAAACAGT TTGGAGTCTG ACACATCTTT AATCAAATCA 
    CACCAAATCT CTAACCAGAT GAAACAATTG ATGATCAAGT TTCAATCTCT GATTGAGGAG 
    GGCAGCCTAG AGGGGCTCTC GACAGCTTTG AGCGAGATGC AAAGCCTAGA GGACATGCAA 
    GAAGAGTACA TGGTACAGAT TGAGACTGAG CAAATGCTTC TACTTAACAA GATAAAGGAG 
    CTTGGTCAAG AAATTATGAG CTCATCGTCT TCCTTGAGCA GAAGATCTTC TGGACTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7493521 ( XM_024582551.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024438319.1 Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa440856
    Clone ID Related Accession (Same CDS sequence) XM_024582551.1
    Accession Version XM_024582551.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2385bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product synaptotagmin-4 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGCCAAT AACACCATTG GAACACTGTG AGTGGCTGAA CAAGCTGTTG 
    ATGGAAATTT GGATGAACTA TATGAACCCA AAGCTTGCAA TAAGATTCTC ATCCATTGTT 
    GAGAAACGAT TGAAACAACA AAGGTTGAAG CTCATGGAAA AACTCGAGTT GCAGGAATTT 
    TCACTTGGTT CATGCCCACC ATCCCTTGGT CTTCATGGGA CTCGCTGGTC AACTTCTGGT 
    GATCAGAGAA TTATGCATTT GGGATTTGAT TGGGACTCCA AAGACATGAG CATTTTGTTG 
    CTGGCTAAGC TGGCAAAGCC ATTAATGGGA ACTGCTCGGA TTGTTATAAA CAGCCTCCAC 
    ATCAAGGGTG AGCTTCTCTT GATGCCAGTT CTGGATGGGA GAGCGGTTTT GTACTCATTT 
    GTGTCAATTC CTGAAGTAAG AATAGGAGTT GCCTTTGGAA GTGGAGGAAG CCAGTCATTA 
    CCTGCCACCG AGCTGCCAGG CGTTTCTTCT TGGCTGGTTA AGGTTTTCAC TGACACCTTA 
    GTCAAGACAA TGATTGAGCC TCGCCGTCGT TGTTTCAGCT TACCAGCAGT AGATTTAAGG 
    AAAAAGGCTG TTGGTGGAAT TGTATACGTG TCAGTCATCT CAGCTAGCAA ACTTTCTAGA 
    AGTAACCTGA GAGGAAGTCC GCCAAGAAGG GTAAATGGTA GTTTCATAGA GCATTTTGAT 
    GATAAATATC TGCAAACATT TGTGGAGGTC GAGCTTGGAC ATTTGACAAG GAGAACAGAT 
    GTGAGACCAG GCTCAAACCC TAGATGGGAT TCCACATTTA ACATGTTCTT ACATGAAGAA 
    ACTGGAACTC TTCGATTACA TCTTTACAAC CGCCCACCCA ACAGTGTGAA GTATGATTAT 
    CTAGCAAGTT GTGAGATCAA GATGAAGTAT GTTGCTGATG ATTCAACAAC GTTTTGGGCA 
    ATAGGACCCG ACTCTGGTGT AATAGCCAAA CATGCTGAGA TTTGCGGAAA AGAGGTTGAA 
    ATGGTTGTTC CATTTGAGGG AGTTACTTCA GGGGAGTTGA CAGTAAAGCT TGTGGTGAAA 
    GAATGGCTGT TCTCTGATGG TTCCCATAGC TTGAACAACG TTAGCTCTCA GAAGTCAATA 
    TATGGATCAT CAAATATTCT TTCAAGAACA GGAAGGAAGA TTAACGTGGC TGTCATGGAG 
    GGAAAAGGTC TTATTTCAAA AGAAAGATCT GGAAAGTGTG ACCCATATGT TAAACTGCAG 
    TATGGAAAGG TCCTACAGAA AACACGGACT GCACATAGCT CTAATCCTCT CTGGAATCAG 
    AAGTTTGAAT TTGATGAGAT AGTAGATGAT AGATGCCTTA AGATTAAATG CTACAGTGAA 
    GAAATCTTTG GAGATGAGAG CATTGGTAGT GCACGAGTAA ATTTGGAAGG TTTGATGGAG 
    GGATTTATCA GGGACATGTG GGTTCCCCTT GAAAAAGTGA ATACAGGAGA ATTAAGGCTT 
    CAAATAGAAG CAGTACAAGT CAATGACTCT GAAGGATCAC GGGGTTCTAT GTCAGGTTCA 
    TTCAATGGTT GGATTGAACT TGTTCTTGTT GAAGCGAAGG ATCTTATTGC TGCTGATCTT 
    AGGGGGACAA GTGATCCATA TGTGAGGGTG CAATATGGAA GCTTGAAGAA GAGAACAAAG 
    GTTATGTACA AAACTCTGAA TCCTCATTGG AATCAAACCC TCGAGTTTCC TGATGATGGC 
    AGTCCCTTAG AGTTGCATGT GAAAGACTAT AATGCCTTGC TGCCCACCTA TAGTATTGGT 
    GATTGTGTTG TAGAGTATCA GGGATTGCCT CCAAACCAGA TGTCCGACAA GTGGATTCCT 
    CTCCAAGGAG TAACAAGGGG AGAGATCCAT GTTCGGATAA CTAGGAAAGT TCCAGAACTA 
    CAAGCAAGAA ACAGTTTGGA GTCTGACACA TCTTTAATCA AATCACACCA AATCTCTAAC 
    CAGATGAAAC AATTGATGAT CAAGTTTCAA TCTCTGATTG AGGAGGGCAG CCTAGAGGGG 
    CTCTCGACAG CTTTGAGCGA GATGCAAAGC CTAGAGGACA TGCAAGAAGA GTACATGGTA 
    CAGATTGAGA CTGAGCAAAT GCTTCTACTT AACAAGATAA AGGAGCTTGG TCAAGAAATT 
    ATGAGCTCAT CGTCTTCCTT GAGCAGAAGA TCTTCTGGAC TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024438319.1
    CDS80..2464
    Translation

    Target ORF information:

    RefSeq Version XM_024582551.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa synaptotagmin-4 (LOC7493521), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024582551.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGGAAGAA CAAGAAAGGG TAAAGCTGGT TTCAAAGTTG AAGATGTTTT GGAGGTCTTT 
    AATCATCTGT TGGAGGAAAA GCCTTCTTTT GCTTTCTTAA TCCCTTTGAT TTTGGTTTGT 
    TGGGGAATTG AGAAATGGGT TTTCTCTTTC TCCAATTGGG TTCCTCTTGT CGTTGCTATC 
    TGGGCTACTT TTCAGCCAAT AACACCATTG GAACACTGTG AGTGGCTGAA CAAGCTGTTG 
    ATGGAAATTT GGATGAACTA TATGAACCCA AAGCTTGCAA TAAGATTCTC ATCCATTGTT 
    GAGAAACGAT TGAAACAACA AAGGTTGAAG CTCATGGAAA AACTCGAGTT GCAGGAATTT 
    TCACTTGGTT CATGCCCACC ATCCCTTGGT CTTCATGGGA CTCGCTGGTC AACTTCTGGT 
    GATCAGAGAA TTATGCATTT GGGATTTGAT TGGGACTCCA AAGACATGAG CATTTTGTTG 
    CTGGCTAAGC TGGCAAAGCC ATTAATGGGA ACTGCTCGGA TTGTTATAAA CAGCCTCCAC 
    ATCAAGGGTG AGCTTCTCTT GATGCCAGTT CTGGATGGGA GAGCGGTTTT GTACTCATTT 
    GTGTCAATTC CTGAAGTAAG AATAGGAGTT GCCTTTGGAA GTGGAGGAAG CCAGTCATTA 
    CCTGCCACCG AGCTGCCAGG CGTTTCTTCT TGGCTGGTTA AGGTTTTCAC TGACACCTTA 
    GTCAAGACAA TGATTGAGCC TCGCCGTCGT TGTTTCAGCT TACCAGCAGT AGATTTAAGG 
    AAAAAGGCTG TTGGTGGAAT TGTATACGTG TCAGTCATCT CAGCTAGCAA ACTTTCTAGA 
    AGTAACCTGA GAGGAAGTCC GCCAAGAAGG GTAAATGGTA GTTTCATAGA GCATTTTGAT 
    GATAAATATC TGCAAACATT TGTGGAGGTC GAGCTTGGAC ATTTGACAAG GAGAACAGAT 
    GTGAGACCAG GCTCAAACCC TAGATGGGAT TCCACATTTA ACATGTTCTT ACATGAAGAA 
    ACTGGAACTC TTCGATTACA TCTTTACAAC CGCCCACCCA ACAGTGTGAA GTATGATTAT 
    CTAGCAAGTT GTGAGATCAA GATGAAGTAT GTTGCTGATG ATTCAACAAC GTTTTGGGCA 
    ATAGGACCCG ACTCTGGTGT AATAGCCAAA CATGCTGAGA TTTGCGGAAA AGAGGTTGAA 
    ATGGTTGTTC CATTTGAGGG AGTTACTTCA GGGGAGTTGA CAGTAAAGCT TGTGGTGAAA 
    GAATGGCTGT TCTCTGATGG TTCCCATAGC TTGAACAACG TTAGCTCTCA GAAGTCAATA 
    TATGGATCAT CAAATATTCT TTCAAGAACA GGAAGGAAGA TTAACGTGGC TGTCATGGAG 
    GGAAAAGGTC TTATTTCAAA AGAAAGATCT GGAAAGTGTG ACCCATATGT TAAACTGCAG 
    TATGGAAAGG TCCTACAGAA AACACGGACT GCACATAGCT CTAATCCTCT CTGGAATCAG 
    AAGTTTGAAT TTGATGAGAT AGTAGATGAT AGATGCCTTA AGATTAAATG CTACAGTGAA 
    GAAATCTTTG GAGATGAGAG CATTGGTAGT GCACGAGTAA ATTTGGAAGG TTTGATGGAG 
    GGATTTATCA GGGACATGTG GGTTCCCCTT GAAAAAGTGA ATACAGGAGA ATTAAGGCTT 
    CAAATAGAAG CAGTACAAGT CAATGACTCT GAAGGATCAC GGGGTTCTAT GTCAGGTTCA 
    TTCAATGGTT GGATTGAACT TGTTCTTGTT GAAGCGAAGG ATCTTATTGC TGCTGATCTT 
    AGGGGGACAA GTGATCCATA TGTGAGGGTG CAATATGGAA GCTTGAAGAA GAGAACAAAG 
    GTTATGTACA AAACTCTGAA TCCTCATTGG AATCAAACCC TCGAGTTTCC TGATGATGGC 
    AGTCCCTTAG AGTTGCATGT GAAAGACTAT AATGCCTTGC TGCCCACCTA TAGTATTGGT 
    GATTGTGTTG TAGAGTATCA GGGATTGCCT CCAAACCAGA TGTCCGACAA GTGGATTCCT 
    CTCCAAGGAG TAACAAGGGG AGAGATCCAT GTTCGGATAA CTAGGAAAGT TCCAGAACTA 
    CAAGCAAGAA ACAGTTTGGA GTCTGACACA TCTTTAATCA AATCACACCA AATCTCTAAC 
    CAGATGAAAC AATTGATGAT CAAGTTTCAA TCTCTGATTG AGGAGGGCAG CCTAGAGGGG 
    CTCTCGACAG CTTTGAGCGA GATGCAAAGC CTAGAGGACA TGCAAGAAGA GTACATGGTA 
    CAGATTGAGA CTGAGCAAAT GCTTCTACTT AACAAGATAA AGGAGCTTGG TCAAGAAATT 
    ATGAGCTCAT CGTCTTCCTT GAGCAGAAGA TCTTCTGGAC TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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