Gene Symbol | Srgap1 |
Entrez Gene ID | 314903 |
Full Name | SLIT-ROBO Rho GTPase activating protein 1 |
Synonyms | RGD1566260 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Srgap1 cDNA ORF clone
gRNAs
Gene Symbol | Srgap1 |
Entrez Gene ID | 314903 |
Full Name | SLIT-ROBO Rho GTPase activating protein 1 |
Synonyms | RGD1566260 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008765403.2 | XP_008763625.2 | SLIT-ROBO Rho GTPase-activating protein 1 isoform X1 |
NM_001191784.1 | NP_001178713.1 | SLIT-ROBO Rho GTPase-activating protein 1 |
Canis lupus familiaris (dog) | SRGAP1 | XP_538265.4 |
Mus musculus (house mouse) | Srgap1 | NP_001074506.1 |
Danio rerio (zebrafish) | srgap1 | XP_005159052.1 |
Rattus norvegicus (Norway rat) | Srgap1 | NP_001178713.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004772 | XP_318044.4 |
Xenopus tropicalis (tropical clawed frog) | srgap1 | XP_004912976.1 |
Pan troglodytes (chimpanzee) | SRGAP1 | XP_509190.2 |
Gallus gallus (chicken) | SRGAP1 | NP_001073570.1 |
Homo sapiens (human) | SRGAP1 | NP_065813.1 |
SRGAP1 | XP_001116844.1 | |
Bos taurus (cattle) | SRGAP1 | NP_001192597.1 |
Mutations of the SLIT2-ROBO2 pathway genes SLIT2 and SRGAP1 confer risk for congenital anomalies of the kidney and urinary tract.
Hwang DY, Kohl S, Fan X, Vivante A, Chan S, Dworschak GC, Schulz J, van Eerde AM, Hilger AC, Gee HY, Pennimpede T, Herrmann BG, van de Hoek G, Renkema KY, Schell C, Huber TB, Reutter HM, Soliman NA, Stajic N, Bogdanovic R, Kehinde EO, Lifton RP, Tasic V, Lu W, Hildebrandt F
Human genetics134(8)905-16(2015 Aug)
Regulated shuttling of Slit-Robo-GTPase activating proteins between nucleus and cytoplasm during brain development.
Yao Q, Jin WL, Wang Y, Ju G
Cellular and molecular neurobiology28(2)205-21(2008 Feb)
Signal transduction in neuronal migration: roles of GTPase activating proteins and the small GTPase Cdc42 in the Slit-Robo pathway.
Wong K, Ren XR, Huang YZ, Xie Y, Liu G, Saito H, Tang H, Wen L, Brady-Kalnay SM, Mei L, Wu JY, Xiong WC, Rao Y
Cell107(2)209-21(2001 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Mutations of the SLIT2-ROBO2 pathway genes SLIT2 and SRGAP1 confer risk for congenital anomalies of the kidney and urinary tract
Title: Mutations of the SLIT2-ROBO2 pathway genes SLIT2 and SRGAP1 confer risk for congenital anomalies of the kidney and urinary tract.
results suggest that srGAPs are not only involved in the regulation of the Slit-Robo signal transduction, but also in neuronal development and that the translocation of srGAPs is important for their functions
Title: Regulated shuttling of Slit-Robo-GTPase activating proteins between nucleus and cytoplasm during brain development.
The following Srgap1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Srgap1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa62015 | |
Clone ID Related Accession (Same CDS sequence) | XM_008765403.2 | |
Accession Version | XM_008765403.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3189bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SLIT-ROBO Rho GTPase-activating protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008765403.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCACCC CGAGCAGATT CAAGAAGGAC AAAGAGATCA TAGCCGAGTA TGAAAGTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008763625.2 |
CDS | 340..3528 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCCACCC CGAGCAGATT CAAGAAGGAC AAAGAGATCA TAGCCGAGTA TGAAAGTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa07649 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191784.1 | |
Accession Version | NM_001191784.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3258bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-31 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SLIT-ROBO Rho GTPase-activating protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07057276.1 and AABR07057274.1. On Jul 17, 2010 this sequence version replaced XM_235213.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMEA2689601 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCCACCC CGAGCAGATT CAAGAAGGAC AAAGAGATCA TAGCCGAGTA TGAAAGTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178713.1 |
CDS | 1..3258 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCACCC CGAGCAGATT CAAGAAGGAC AAAGAGATCA TAGCCGAGTA TGAAAGTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mutations of the SLIT2-ROBO2 pathway genes SLIT2 and SRGAP1 confer risk for congenital anomalies of the kidney and urinary tract. |
Regulated shuttling of Slit-Robo-GTPase activating proteins between nucleus and cytoplasm during brain development. |
Signal transduction in neuronal migration: roles of GTPase activating proteins and the small GTPase Cdc42 in the Slit-Robo pathway. |