Gene Symbol | Ddo |
Entrez Gene ID | 685325 |
Full Name | D-aspartate oxidase |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ddo cDNA ORF clone
Gene Symbol | Ddo |
Entrez Gene ID | 685325 |
Full Name | D-aspartate oxidase |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017601772.1 | XP_017457261.1 | D-aspartate oxidase isoform X1 |
NM_001109465.2 | NP_001102935.1 | D-aspartate oxidase |
LOC100428490 | XP_002803988.1 | |
Danio rerio (zebrafish) | zgc:172341 | XP_002665184.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_08011 | XP_003714961.1 |
Bos taurus (cattle) | DDO | NP_776333.1 |
Danio rerio (zebrafish) | LOC100332733 | XP_002665186.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005323 | XP_315337.2 |
Kluyveromyces lactis | KLLA0A02475g | XP_451109.1 |
Schizosaccharomyces pombe (fission yeast) | SPCC1450.07c | NP_588306.1 |
Xenopus tropicalis (tropical clawed frog) | ddo | XP_004914617.1 |
Homo sapiens (human) | DDO | NP_003640.2 |
Rattus norvegicus (Norway rat) | Ddo | NP_001102935.1 |
Drosophila melanogaster (fruit fly) | CG12338 | NP_610603.2 |
Caenorhabditis elegans (roundworm) | daao-1 | NP_500234.3 |
Neurospora crassa | NCU06558 | XP_962265.1 |
Pan troglodytes (chimpanzee) | DDO | XP_003311477.1 |
Gallus gallus (chicken) | DDO | XP_004940363.1 |
Canis lupus familiaris (dog) | DDO | XP_532262.2 |
Mus musculus (house mouse) | Ddo | NP_081718.2 |
Characterization of the enzymatic and structural properties of human D-aspartate oxidase and comparison with those of the rat and mouse enzymes.
Katane M, Kawata T, Nakayama K, Saitoh Y, Kaneko Y, Matsuda S, Saitoh Y, Miyamoto T, Sekine M, Homma H
Biological & pharmaceutical bulletin38(2)298-305(2015)
Thiolactomycin inhibits D-aspartate oxidase: a novel approach to probing the active site environment.
Katane M, Saitoh Y, Hanai T, Sekine M, Furuchi T, Koyama N, Nakagome I, Tomoda H, Hirono S, Homma H
Biochimie92(10)1371-8(2010 Oct)
A proteome-wide perspective on peroxisome targeting signal 1(PTS1)-Pex5p affinities.
Ghosh D, Berg JM
Journal of the American Chemical Society132(11)3973-9(2010 Mar)
D-aspartate regulates melanocortin formation and function: behavioral alterations in D-aspartate oxidase-deficient mice.
Huang AS, Beigneux A, Weil ZM, Kim PM, Molliver ME, Blackshaw S, Nelson RJ, Young SG, Snyder SH
The Journal of neuroscience : the official journal of the Society for Neuroscience26(10)2814-9(2006 Mar)
Structural and functional characterization of the human brain D-aspartate oxidase.
Setoyama C, Miura R
Journal of biochemistry121(4)798-803(1997 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ddo gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ddo cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa10009 | |
Clone ID Related Accession (Same CDS sequence) | NM_001109465.2 | |
Accession Version | NM_001109465.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | D-aspartate oxidase | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07045478.1. On Sep 27, 2008 this sequence version replaced NM_001109465.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: AB983592.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACACGG TGCGTATTGC GGTCGTCGGA GCTGGCGTGA TAGGGCTGTC TACTGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001102935.1 |
CDS | 61..1086 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001109465.2 |
1 | ATGGACACGG TGCGTATTGC GGTCGTCGGA GCTGGCGTGA TAGGGCTGTC TACTGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60188 | |
Clone ID Related Accession (Same CDS sequence) | XM_017601772.1 | |
Accession Version | XM_017601772.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | D-aspartate oxidase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACACGG TGCGTATTGC GGTCGTCGGA GCTGGCGTGA TAGGGCTGTC TACTGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017457261.1 |
CDS | 123..701 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017601772.1 |
1 | ATGGACACGG TGCGTATTGC GGTCGTCGGA GCTGGCGTGA TAGGGCTGTC TACTGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Characterization of the enzymatic and structural properties of human D-aspartate oxidase and comparison with those of the rat and mouse enzymes. |
Thiolactomycin inhibits D-aspartate oxidase: a novel approach to probing the active site environment. |
A proteome-wide perspective on peroxisome targeting signal 1(PTS1)-Pex5p affinities. |
D-aspartate regulates melanocortin formation and function: behavioral alterations in D-aspartate oxidase-deficient mice. |
Structural and functional characterization of the human brain D-aspartate oxidase. |