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nr4a2 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol nr4a2
Entrez Gene ID 100101682
Full Name nuclear receptor subfamily 4 group A member 2
Synonyms NGFI-B,hzf-3,not,nurr1,rnr1,tinur
General protein information
Preferred Names

nuclear receptor subfamily 4 group A member 2

Names

nuclear receptor subfamily 4 group A member 2
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012969938.2 XP_012825392.1 nuclear receptor subfamily 4 group A member 2 isoform X1
XM_012969938.3 XP_012825392.1 nuclear receptor subfamily 4 group A member 2 isoform X1
NM_001100208.1 NP_001093678.1 nuclear receptor subfamily 4 group A member 2

Pathways from BioSystems


Homologies


Bos taurus (cattle) NR4A2 NP_001069676.1
Xenopus tropicalis (tropical clawed frog) nr4a2 NP_001093678.1
Homo sapiens (human) NR4A2 NP_006177.1
Canis lupus familiaris (dog) NR4A2 XP_535920.2
Danio rerio (zebrafish) nr4a2a NP_001106956.1
Pan troglodytes (chimpanzee) NR4A2 XP_003309349.1
NR4A2 XP_001086719.1
Mus musculus (house mouse) Nr4a2 NP_001132981.1
Rattus norvegicus (Norway rat) Nr4a2 NP_062201.2
Gallus gallus (chicken) NR4A2 XP_422166.2

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following nr4a2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nr4a2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa00793 NM_001100208.1
Latest version!		 Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OXa30211 XM_012969938.3
Latest version!		 Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OXa30211 XM_012969938.2 Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa00793
Clone ID Related Accession (Same CDS sequence) NM_001100208.1
Accession Version NM_001100208.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1776bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-26
Organism Xenopus tropicalis(tropical clawed frog)
Product nuclear receptor subfamily 4 group A member 2
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC136009.1. ##Evidence-Data-START## Transcript exon combination :: BC136009.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028295, SAMD00028298 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGCCCTGTG TTCAGGCTCA GTATGGGTCA TCGCCTCAAG GAGCCAGCCC AGCTTCCCAG 
AGCTACACTT ACCACTCTTC AGGAGAATAC AGCTCCGATT TCTTAACTCC AGAGTTTGTC 
AAGTTTAGCA TGGACCTCAC CAACACTGAA ATCACTGCCA CCACTTCTCT CCCCAGCTTT 
AGTACCTTTA TGGACAACTA CAACACAAGT TACGACGTCA AGCCTCCTTG CTTGTACCAA 
ATGCCCCTCT CCGGCCAGCA GTCTTCTGTA AAAGTGGAAG ATATACAGAT GCACGGCTAC 
CAACAGCACG GCCACCTACC GCCCCAAAGC GAGGAGATGA TGTCCCATTC AGGCTCAGTC 
TACTACAAAC CTTCATCGCC CCCCACTTCC AGTACCCCCG GTTTCCCTGT CCAACACAGC 
CCAATGTGGG ATAACCATGG CTCTCTGCAC AGTTTCAATC AAAACTATGT GGCCACCAGA 
GGAGGTCATG TCCCCAGGCT TTCCTTGTTC TCTTTTAAAC AGTCTCCACC TGGAACGCCT 
GTGTCTAGTT GCCAGATGCG GTTTGATGGC CACCATGTGT CTATGAACCC CGAAACCTCA 
GGAGCCCACC ATGTAATAGA CGGACAGACA TTTGCAGTCC CCAATCCCAT CAGAAAACAG 
GCATCTATGG GCTTCCCTGG GCTACAGCTT GGTCATGCGT CGCAACTAAT AGACAGCCAG 
GTACCTTCAC CGCCTTCTAG AGGGTCTCCA TCAAACGAGG GTCTCTGTGC TGTTTGTGGG 
GACAACGCTG CTTGCCAACA CTATGGAGTT CGTACATGTG AAGGATGTAA AGGGTTCTTC 
AAGCGCACAG TGCAGAAAAA TGCCAAATAT GTTTGTTTAG CGAATAAGAA CTGTCCGGTG 
GACAAAAGGC GTAGGAATAG ATGTCAGTAC TGCCGGTTCC AGAAGTGTCT GGTTGTCGGT 
ATGGTCAAAG AAGTGGTCCG CACAGACAGT TTAAAAGGTC GGAGGGGTCG CTTGCCATCT 
AAGCCCAAGA GTCCCCAGGA ACCATCGCCC CCCAGTCCCC CAGTGAGTCT GATCAGTGCA 
CTAGTGAGAG CCCACGTCGA CTCCAATCCG GCAGTGAGCA GTCTGGACTA TTCTAGGTTT 
CAGGCTAACC CAGAGTATCA GATGAATGGA GACGATACAC AACACATCCA ACAGTTTTAT 
GATCTGCTGA CCGGTTCCAT GGAGATCATT AGAGGTTGGG CAGAGAAGAT CCCAGGATTC 
TCTGAGCTGC ACAAACAGGA CCAAGACCTG CTCTTTGAGT CTGCTTTCCT GGAACTTTTT 
GTCTTGCGAC TGGCATACAG GTCTAACCCA GCAGAGGGTA AACTCATCTT CTGCAATGGG 
GTTGTACTCA ACAGACTGCA GTGTGTTCGT GGTTTTGGAG AATGGATAGA TTCCATCGTG 
GACTTTTCTT CCAACTTGCA CAGCATGAAC ATAGATATAT CAGCGTTCTC CTGTATTGCA 
GCCCTGGCCG TGATTACAGA GAGACACGGA TTGAAAGAAC CAAAAAGAGT AGAAGAACTC 
CAGAATAAAA TTGTAAACTG CCTCAAAGAC CATGTGACTT TTAATAATGG GGGGTTAAAT 
CGGCCCAATT ACCTTTCCAA ACTCTTAGGG AAACTGCCTG AACTTCGCAC TTTGTGCACC 
CAAGGACTGC AACGCATATT CTACCTGAAG CTGGAAGACT TGGTACCTCC ACCTGCCATC 
ATTGACAAAT TGTTTCTGGA CACATTACCG TTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001093678.1
CDS171..1946
Translation

Target ORF information:

RefSeq Version NM_001100208.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001100208.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGCCCTGTG TTCAGGCTCA GTATGGGTCA TCGCCTCAAG GAGCCAGCCC AGCTTCCCAG 
AGCTACACTT ACCACTCTTC AGGAGAATAC AGCTCCGATT TCTTAACTCC AGAGTTTGTC 
AAGTTTAGCA TGGACCTCAC CAACACTGAA ATCACTGCCA CCACTTCTCT CCCCAGCTTT 
AGTACCTTTA TGGACAACTA CAACACAAGT TACGACGTCA AGCCTCCTTG CTTGTACCAA 
ATGCCCCTCT CCGGCCAGCA GTCTTCTGTA AAAGTGGAAG ATATACAGAT GCACGGCTAC 
CAACAGCACG GCCACCTACC GCCCCAAAGC GAGGAGATGA TGTCCCATTC AGGCTCAGTC 
TACTACAAAC CTTCATCGCC CCCCACTTCC AGTACCCCCG GTTTCCCTGT CCAACACAGC 
CCAATGTGGG ATAACCATGG CTCTCTGCAC AGTTTCAATC AAAACTATGT GGCCACCAGA 
GGAGGTCATG TCCCCAGGCT TTCCTTGTTC TCTTTTAAAC AGTCTCCACC TGGAACGCCT 
GTGTCTAGTT GCCAGATGCG GTTTGATGGC CACCATGTGT CTATGAACCC CGAAACCTCA 
GGAGCCCACC ATGTAATAGA CGGACAGACA TTTGCAGTCC CCAATCCCAT CAGAAAACAG 
GCATCTATGG GCTTCCCTGG GCTACAGCTT GGTCATGCGT CGCAACTAAT AGACAGCCAG 
GTACCTTCAC CGCCTTCTAG AGGGTCTCCA TCAAACGAGG GTCTCTGTGC TGTTTGTGGG 
GACAACGCTG CTTGCCAACA CTATGGAGTT CGTACATGTG AAGGATGTAA AGGGTTCTTC 
AAGCGCACAG TGCAGAAAAA TGCCAAATAT GTTTGTTTAG CGAATAAGAA CTGTCCGGTG 
GACAAAAGGC GTAGGAATAG ATGTCAGTAC TGCCGGTTCC AGAAGTGTCT GGTTGTCGGT 
ATGGTCAAAG AAGTGGTCCG CACAGACAGT TTAAAAGGTC GGAGGGGTCG CTTGCCATCT 
AAGCCCAAGA GTCCCCAGGA ACCATCGCCC CCCAGTCCCC CAGTGAGTCT GATCAGTGCA 
CTAGTGAGAG CCCACGTCGA CTCCAATCCG GCAGTGAGCA GTCTGGACTA TTCTAGGTTT 
CAGGCTAACC CAGAGTATCA GATGAATGGA GACGATACAC AACACATCCA ACAGTTTTAT 
GATCTGCTGA CCGGTTCCAT GGAGATCATT AGAGGTTGGG CAGAGAAGAT CCCAGGATTC 
TCTGAGCTGC ACAAACAGGA CCAAGACCTG CTCTTTGAGT CTGCTTTCCT GGAACTTTTT 
GTCTTGCGAC TGGCATACAG GTCTAACCCA GCAGAGGGTA AACTCATCTT CTGCAATGGG 
GTTGTACTCA ACAGACTGCA GTGTGTTCGT GGTTTTGGAG AATGGATAGA TTCCATCGTG 
GACTTTTCTT CCAACTTGCA CAGCATGAAC ATAGATATAT CAGCGTTCTC CTGTATTGCA 
GCCCTGGCCG TGATTACAGA GAGACACGGA TTGAAAGAAC CAAAAAGAGT AGAAGAACTC 
CAGAATAAAA TTGTAAACTG CCTCAAAGAC CATGTGACTT TTAATAATGG GGGGTTAAAT 
CGGCCCAATT ACCTTTCCAA ACTCTTAGGG AAACTGCCTG AACTTCGCAC TTTGTGCACC 
CAAGGACTGC AACGCATATT CTACCTGAAG CTGGAAGACT TGGTACCTCC ACCTGCCATC 
ATTGACAAAT TGTTTCTGGA CACATTACCG TTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa30211
Clone ID Related Accession (Same CDS sequence) XM_012969938.2 , XM_012969938.3
Accession Version XM_012969938.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product nuclear receptor subfamily 4 group A member 2 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012969938.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGACAACT ACAACACAAG TTACGACGTC AAGCCTCCTT GCTTGTACCA AATGCCCCTC 
TCCGGCCAGC AGTCTTCTGT AAAAGTGGAA GATATACAGA TGCACGGCTA CCAACAGCAC 
GGCCACCTAC CGCCCCAAAG CGAGGAGATG ATGTCCCATT CAGGCTCAGT CTACTACAAA 
CCTTCATCGC CCCCCACTTC CAGTACCCCC GGTTTCCCTG TCCAACACAG CCCAATGTGG 
GATAACCATG GCTCTCTGCA CAGTTTCAAT CAAAACTATG TGGCCACCAG AGGAGGTCAT 
GTCCCCAGGC TTTCCTTGTT CTCTTTTAAA CAGTCTCCAC CTGGAACGCC TGTGTCTAGT 
TGCCAGATGC GGTTTGATGG CCACCATGTG TCTATGAACC CCGAAACCTC AGGAGCCCAC 
CATGTAATAG ACGGACAGAC ATTTGCAGTC CCCAATCCCA TCAGAAAACA GGCATCTATG 
GGCTTCCCTG GGCTACAGCT TGGTCATGCG TCGCAACTAA TAGACAGCCA GGTACCTTCA 
CCGCCTTCTA GAGGGTCTCC ATCAAACGAG GGTCTCTGTG CTGTTTGTGG GGACAACGCT 
GCTTGCCAAC ACTATGGAGT TCGTACATGT GAAGGATGTA AAGGGTTCTT CAAGCGCACA 
GTGCAGAAAA ATGCCAAATA TGTTTGTTTA GCGAATAAGA ACTGTCCGGT GGACAAAAGG 
CGTAGGAATA GATGTCAGTA CTGCCGGTTC CAGAAGTGTC TGGTTGTCGG TATGGTCAAA 
GAAGTGGTCC GCACAGACAG TTTAAAAGGT CGGAGGGGTC GCTTGCCATC TAAGCCCAAG 
AGTCCCCAGG AACCATCGCC CCCCAGTCCC CCAGTGAGTC TGATCAGTGC ACTAGTGAGA 
GCCCACGTCG ACTCCAATCC GGCAGTGAGC AGTCTGGACT ATTCTAGGTT TCAGGCTAAC 
CCAGAGTATC AGATGAATGG AGACGATACA CAACACATCC AACAGTTTTA TGATCTGCTG 
ACCGGTTCCA TGGAGATCAT TAGAGGTTGG GCAGAGAAGA TCCCAGGATT CTCTGAGCTG 
CACAAACAGG ACCAAGACCT GCTCTTTGAG TCTGCTTTCC TGGAACTTTT TGTCTTGCGA 
CTGGCATACA GGTCTAACCC AGCAGAGGGT AAACTCATCT TCTGCAATGG GGTTGTACTC 
AACAGACTGC AGTGTGTTCG TGGTTTTGGA GAATGGATAG ATTCCATCGT GGACTTTTCT 
TCCAACTTGC ACAGCATGAA CATAGATATA TCAGCGTTCT CCTGTATTGC AGCCCTGGCC 
GTGATTACAG AGAGACACGG ATTGAAAGAA CCAAAAAGAG TAGAAGAACT CCAGAATAAA 
ATTGTAAACT GCCTCAAAGA CCATGTGACT TTTAATAATG GGGGGTTAAA TCGGCCCAAT 
TACCTTTCCA AACTCTTAGG GAAACTGCCT GAACTTCGCA CTTTGTGCAC CCAAGGACTG 
CAACGCATAT TCTACCTGAA GCTGGAAGAC TTGGTACCTC CACCTGCCAT CATTGACAAA 
TTGTTTCTGG ACACATTACC GTTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012825392.1
CDS331..1917
Translation

Target ORF information:

RefSeq Version XM_012969938.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012969938.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGACAACT ACAACACAAG TTACGACGTC AAGCCTCCTT GCTTGTACCA AATGCCCCTC 
TCCGGCCAGC AGTCTTCTGT AAAAGTGGAA GATATACAGA TGCACGGCTA CCAACAGCAC 
GGCCACCTAC CGCCCCAAAG CGAGGAGATG ATGTCCCATT CAGGCTCAGT CTACTACAAA 
CCTTCATCGC CCCCCACTTC CAGTACCCCC GGTTTCCCTG TCCAACACAG CCCAATGTGG 
GATAACCATG GCTCTCTGCA CAGTTTCAAT CAAAACTATG TGGCCACCAG AGGAGGTCAT 
GTCCCCAGGC TTTCCTTGTT CTCTTTTAAA CAGTCTCCAC CTGGAACGCC TGTGTCTAGT 
TGCCAGATGC GGTTTGATGG CCACCATGTG TCTATGAACC CCGAAACCTC AGGAGCCCAC 
CATGTAATAG ACGGACAGAC ATTTGCAGTC CCCAATCCCA TCAGAAAACA GGCATCTATG 
GGCTTCCCTG GGCTACAGCT TGGTCATGCG TCGCAACTAA TAGACAGCCA GGTACCTTCA 
CCGCCTTCTA GAGGGTCTCC ATCAAACGAG GGTCTCTGTG CTGTTTGTGG GGACAACGCT 
GCTTGCCAAC ACTATGGAGT TCGTACATGT GAAGGATGTA AAGGGTTCTT CAAGCGCACA 
GTGCAGAAAA ATGCCAAATA TGTTTGTTTA GCGAATAAGA ACTGTCCGGT GGACAAAAGG 
CGTAGGAATA GATGTCAGTA CTGCCGGTTC CAGAAGTGTC TGGTTGTCGG TATGGTCAAA 
GAAGTGGTCC GCACAGACAG TTTAAAAGGT CGGAGGGGTC GCTTGCCATC TAAGCCCAAG 
AGTCCCCAGG AACCATCGCC CCCCAGTCCC CCAGTGAGTC TGATCAGTGC ACTAGTGAGA 
GCCCACGTCG ACTCCAATCC GGCAGTGAGC AGTCTGGACT ATTCTAGGTT TCAGGCTAAC 
CCAGAGTATC AGATGAATGG AGACGATACA CAACACATCC AACAGTTTTA TGATCTGCTG 
ACCGGTTCCA TGGAGATCAT TAGAGGTTGG GCAGAGAAGA TCCCAGGATT CTCTGAGCTG 
CACAAACAGG ACCAAGACCT GCTCTTTGAG TCTGCTTTCC TGGAACTTTT TGTCTTGCGA 
CTGGCATACA GGTCTAACCC AGCAGAGGGT AAACTCATCT TCTGCAATGG GGTTGTACTC 
AACAGACTGC AGTGTGTTCG TGGTTTTGGA GAATGGATAG ATTCCATCGT GGACTTTTCT 
TCCAACTTGC ACAGCATGAA CATAGATATA TCAGCGTTCT CCTGTATTGC AGCCCTGGCC 
GTGATTACAG AGAGACACGG ATTGAAAGAA CCAAAAAGAG TAGAAGAACT CCAGAATAAA 
ATTGTAAACT GCCTCAAAGA CCATGTGACT TTTAATAATG GGGGGTTAAA TCGGCCCAAT 
TACCTTTCCA AACTCTTAGG GAAACTGCCT GAACTTCGCA CTTTGTGCAC CCAAGGACTG 
CAACGCATAT TCTACCTGAA GCTGGAAGAC TTGGTACCTC CACCTGCCAT CATTGACAAA 
TTGTTTCTGG ACACATTACC GTTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa30211
Clone ID Related Accession (Same CDS sequence) XM_012969938.2 , XM_012969938.3
Accession Version XM_012969938.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product nuclear receptor subfamily 4 group A member 2 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012969938.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGACAACT ACAACACAAG TTACGACGTC AAGCCTCCTT GCTTGTACCA AATGCCCCTC 
TCCGGCCAGC AGTCTTCTGT AAAAGTGGAA GATATACAGA TGCACGGCTA CCAACAGCAC 
GGCCACCTAC CGCCCCAAAG CGAGGAGATG ATGTCCCATT CAGGCTCAGT CTACTACAAA 
CCTTCATCGC CCCCCACTTC CAGTACCCCC GGTTTCCCTG TCCAACACAG CCCAATGTGG 
GATAACCATG GCTCTCTGCA CAGTTTCAAT CAAAACTATG TGGCCACCAG AGGAGGTCAT 
GTCCCCAGGC TTTCCTTGTT CTCTTTTAAA CAGTCTCCAC CTGGAACGCC TGTGTCTAGT 
TGCCAGATGC GGTTTGATGG CCACCATGTG TCTATGAACC CCGAAACCTC AGGAGCCCAC 
CATGTAATAG ACGGACAGAC ATTTGCAGTC CCCAATCCCA TCAGAAAACA GGCATCTATG 
GGCTTCCCTG GGCTACAGCT TGGTCATGCG TCGCAACTAA TAGACAGCCA GGTACCTTCA 
CCGCCTTCTA GAGGGTCTCC ATCAAACGAG GGTCTCTGTG CTGTTTGTGG GGACAACGCT 
GCTTGCCAAC ACTATGGAGT TCGTACATGT GAAGGATGTA AAGGGTTCTT CAAGCGCACA 
GTGCAGAAAA ATGCCAAATA TGTTTGTTTA GCGAATAAGA ACTGTCCGGT GGACAAAAGG 
CGTAGGAATA GATGTCAGTA CTGCCGGTTC CAGAAGTGTC TGGTTGTCGG TATGGTCAAA 
GAAGTGGTCC GCACAGACAG TTTAAAAGGT CGGAGGGGTC GCTTGCCATC TAAGCCCAAG 
AGTCCCCAGG AACCATCGCC CCCCAGTCCC CCAGTGAGTC TGATCAGTGC ACTAGTGAGA 
GCCCACGTCG ACTCCAATCC GGCAGTGAGC AGTCTGGACT ATTCTAGGTT TCAGGCTAAC 
CCAGAGTATC AGATGAATGG AGACGATACA CAACACATCC AACAGTTTTA TGATCTGCTG 
ACCGGTTCCA TGGAGATCAT TAGAGGTTGG GCAGAGAAGA TCCCAGGATT CTCTGAGCTG 
CACAAACAGG ACCAAGACCT GCTCTTTGAG TCTGCTTTCC TGGAACTTTT TGTCTTGCGA 
CTGGCATACA GGTCTAACCC AGCAGAGGGT AAACTCATCT TCTGCAATGG GGTTGTACTC 
AACAGACTGC AGTGTGTTCG TGGTTTTGGA GAATGGATAG ATTCCATCGT GGACTTTTCT 
TCCAACTTGC ACAGCATGAA CATAGATATA TCAGCGTTCT CCTGTATTGC AGCCCTGGCC 
GTGATTACAG AGAGACACGG ATTGAAAGAA CCAAAAAGAG TAGAAGAACT CCAGAATAAA 
ATTGTAAACT GCCTCAAAGA CCATGTGACT TTTAATAATG GGGGGTTAAA TCGGCCCAAT 
TACCTTTCCA AACTCTTAGG GAAACTGCCT GAACTTCGCA CTTTGTGCAC CCAAGGACTG 
CAACGCATAT TCTACCTGAA GCTGGAAGAC TTGGTACCTC CACCTGCCAT CATTGACAAA 
TTGTTTCTGG ACACATTACC GTTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012825392.1
CDS292..1878
Translation

Target ORF information:

RefSeq Version XM_012969938.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis nuclear receptor subfamily 4 group A member 2 (nr4a2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012969938.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGACAACT ACAACACAAG TTACGACGTC AAGCCTCCTT GCTTGTACCA AATGCCCCTC 
TCCGGCCAGC AGTCTTCTGT AAAAGTGGAA GATATACAGA TGCACGGCTA CCAACAGCAC 
GGCCACCTAC CGCCCCAAAG CGAGGAGATG ATGTCCCATT CAGGCTCAGT CTACTACAAA 
CCTTCATCGC CCCCCACTTC CAGTACCCCC GGTTTCCCTG TCCAACACAG CCCAATGTGG 
GATAACCATG GCTCTCTGCA CAGTTTCAAT CAAAACTATG TGGCCACCAG AGGAGGTCAT 
GTCCCCAGGC TTTCCTTGTT CTCTTTTAAA CAGTCTCCAC CTGGAACGCC TGTGTCTAGT 
TGCCAGATGC GGTTTGATGG CCACCATGTG TCTATGAACC CCGAAACCTC AGGAGCCCAC 
CATGTAATAG ACGGACAGAC ATTTGCAGTC CCCAATCCCA TCAGAAAACA GGCATCTATG 
GGCTTCCCTG GGCTACAGCT TGGTCATGCG TCGCAACTAA TAGACAGCCA GGTACCTTCA 
CCGCCTTCTA GAGGGTCTCC ATCAAACGAG GGTCTCTGTG CTGTTTGTGG GGACAACGCT 
GCTTGCCAAC ACTATGGAGT TCGTACATGT GAAGGATGTA AAGGGTTCTT CAAGCGCACA 
GTGCAGAAAA ATGCCAAATA TGTTTGTTTA GCGAATAAGA ACTGTCCGGT GGACAAAAGG 
CGTAGGAATA GATGTCAGTA CTGCCGGTTC CAGAAGTGTC TGGTTGTCGG TATGGTCAAA 
GAAGTGGTCC GCACAGACAG TTTAAAAGGT CGGAGGGGTC GCTTGCCATC TAAGCCCAAG 
AGTCCCCAGG AACCATCGCC CCCCAGTCCC CCAGTGAGTC TGATCAGTGC ACTAGTGAGA 
GCCCACGTCG ACTCCAATCC GGCAGTGAGC AGTCTGGACT ATTCTAGGTT TCAGGCTAAC 
CCAGAGTATC AGATGAATGG AGACGATACA CAACACATCC AACAGTTTTA TGATCTGCTG 
ACCGGTTCCA TGGAGATCAT TAGAGGTTGG GCAGAGAAGA TCCCAGGATT CTCTGAGCTG 
CACAAACAGG ACCAAGACCT GCTCTTTGAG TCTGCTTTCC TGGAACTTTT TGTCTTGCGA 
CTGGCATACA GGTCTAACCC AGCAGAGGGT AAACTCATCT TCTGCAATGG GGTTGTACTC 
AACAGACTGC AGTGTGTTCG TGGTTTTGGA GAATGGATAG ATTCCATCGT GGACTTTTCT 
TCCAACTTGC ACAGCATGAA CATAGATATA TCAGCGTTCT CCTGTATTGC AGCCCTGGCC 
GTGATTACAG AGAGACACGG ATTGAAAGAA CCAAAAAGAG TAGAAGAACT CCAGAATAAA 
ATTGTAAACT GCCTCAAAGA CCATGTGACT TTTAATAATG GGGGGTTAAA TCGGCCCAAT 
TACCTTTCCA AACTCTTAGG GAAACTGCCT GAACTTCGCA CTTTGTGCAC CCAAGGACTG 
CAACGCATAT TCTACCTGAA GCTGGAAGAC TTGGTACCTC CACCTGCCAT CATTGACAAA 
TTGTTTCTGG ACACATTACC GTTTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P