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LOC101730817 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol LOC101730817
Entrez Gene ID 101730817
Full Name histone H2A type 1-like
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_004913857.3 XP_004913914.1 histone H2A type 1-like
XM_004913857.4 XP_004913914.1 histone H2A type 1

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) LOC746557 XP_001166488.1
Rattus norvegicus (Norway rat) Hist2h2ab NP_001104811.1
Danio rerio (zebrafish) LOC100000574 XP_001334871.1
Danio rerio (zebrafish) LOC100001004 XP_001335390.1
Danio rerio (zebrafish) LOC100151041 XP_001920286.4
Drosophila melanogaster (fruit fly) His2A:CG33853 NP_001027366.1
Xenopus tropicalis (tropical clawed frog) LOC100497456 XP_002942896.2
Xenopus tropicalis (tropical clawed frog) LOC100494316 XP_002944390.1
Xenopus tropicalis (tropical clawed frog) LOC100496440 XP_002942346.2
Xenopus tropicalis (tropical clawed frog) hist1h2ah NP_001120117.1
Xenopus tropicalis (tropical clawed frog) hist1h2ad NP_001025503.1
Xenopus tropicalis (tropical clawed frog) LOC100495187 XP_002943526.1
Xenopus tropicalis (tropical clawed frog) LOC100497614 XP_004919929.1
Xenopus tropicalis (tropical clawed frog) LOC100487526 XP_002940841.1
Xenopus tropicalis (tropical clawed frog) LOC101735111 XP_004915675.1
Xenopus tropicalis (tropical clawed frog) LOC100492813 XP_002942385.1
Canis lupus familiaris (dog) LOC100855609 XP_003639665.1
Bos taurus (cattle) HIST2H2AB XP_002686098.1
Danio rerio (zebrafish) LOC565202 XP_693579.2
Danio rerio (zebrafish) LOC100004768 XP_001338956.1
Danio rerio (zebrafish) si:ch211-113a14.19 XP_689030.3
Danio rerio (zebrafish) zgc:195633 NP_001136058.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP012711 XP_307083.3
Arabidopsis thaliana (thale cress) HTA13 NP_188703.1
Arabidopsis thaliana (thale cress) HTA10 NP_175517.1
Arabidopsis thaliana (thale cress) RAT5 NP_200275.1
Oryza sativa (rice) Os07g0545300 NP_001059914.1
Oryza sativa (rice) Os12g0438000 NP_001066688.1
Xenopus tropicalis (tropical clawed frog) LOC100496752 XP_004919336.1
Xenopus tropicalis (tropical clawed frog) LOC101734557 XP_004917059.1
Xenopus tropicalis (tropical clawed frog) LOC100493706 XP_002945549.1
Xenopus tropicalis (tropical clawed frog) LOC100487588 XP_002943222.1
Xenopus tropicalis (tropical clawed frog) LOC101735276 XP_004913905.1
Xenopus tropicalis (tropical clawed frog) LOC101734842 XP_004913902.1
Xenopus tropicalis (tropical clawed frog) LOC101733880 XP_004913892.1
Xenopus tropicalis (tropical clawed frog) LOC101732823 XP_004912080.1
Xenopus tropicalis (tropical clawed frog) LOC101732059 XP_004919109.1
HIST2H2AB XP_001096734.1
Danio rerio (zebrafish) zgc:101846 NP_001005967.1
Danio rerio (zebrafish) LOC559220 XP_005163276.1
Danio rerio (zebrafish) zgc:110434 XP_005168861.1
Danio rerio (zebrafish) LOC100334621 XP_003201515.1
Danio rerio (zebrafish) LOC100334934 XP_002666988.1
Danio rerio (zebrafish) si:ch211-113a14.16 XP_688798.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP012895 XP_306256.1
Xenopus tropicalis (tropical clawed frog) hist1h2aj NP_001004821.1
Xenopus tropicalis (tropical clawed frog) LOC100497241 XP_002943147.1
Xenopus tropicalis (tropical clawed frog) LOC101733262 XP_004917645.1
Xenopus tropicalis (tropical clawed frog) LOC101731897 XP_004913865.1
Xenopus tropicalis (tropical clawed frog) LOC100485081 XP_002940826.2
Xenopus tropicalis (tropical clawed frog) LOC101730371 XP_004914345.1
Xenopus tropicalis (tropical clawed frog) LOC100485548 XP_002940829.1
Xenopus tropicalis (tropical clawed frog) LOC101730347 XP_004913908.1
Xenopus tropicalis (tropical clawed frog) LOC100489065 XP_004913895.1
Xenopus tropicalis (tropical clawed frog) LOC101733986 XP_004913893.1
Xenopus tropicalis (tropical clawed frog) LOC100488903 XP_004913875.1
Xenopus tropicalis (tropical clawed frog) LOC100492873 XP_002944658.1
Xenopus tropicalis (tropical clawed frog) LOC101731006 XP_004919327.1
Xenopus tropicalis (tropical clawed frog) LOC100488021 XP_002942202.2
Mus musculus (house mouse) Hist2h2ab NP_835585.3
Danio rerio (zebrafish) zgc:173652 NP_001096634.1
Danio rerio (zebrafish) LOC100004510 XP_001337024.1
Danio rerio (zebrafish) LOC570115 XP_698647.2
Drosophila melanogaster (fruit fly) His2A:CG33856 NP_001027371.1
Arabidopsis thaliana (thale cress) HTA2 NP_194453.1
Xenopus tropicalis (tropical clawed frog) LOC101731295 XP_004919909.1
Xenopus tropicalis (tropical clawed frog) LOC100492975 XP_002942386.1
Xenopus tropicalis (tropical clawed frog) LOC100495988 XP_002942343.1
Xenopus tropicalis (tropical clawed frog) LOC100495625 XP_004917049.1
Xenopus tropicalis (tropical clawed frog) LOC100496919 XP_004919471.1
Xenopus tropicalis (tropical clawed frog) LOC100487632 XP_002940905.1
Xenopus tropicalis (tropical clawed frog) LOC100488074 XP_002943225.1
Xenopus tropicalis (tropical clawed frog) hist2h2ab NP_001025496.1
Xenopus tropicalis (tropical clawed frog) LOC101734900 XP_004919083.1
Xenopus tropicalis (tropical clawed frog) LOC100485854 XP_002941404.1
Homo sapiens (human) HIST2H2AB NP_778235.1
Danio rerio (zebrafish) zgc:114037 NP_001026996.1
Danio rerio (zebrafish) si:ch211-113a14.7 XP_005163251.1
Danio rerio (zebrafish) LOC100536331 XP_005163253.1
Drosophila melanogaster (fruit fly) His2A:CG33859 NP_001027376.1
Oryza sativa (rice) Os07g0545400 NP_001059915.1
Xenopus tropicalis (tropical clawed frog) LOC101730761 XP_004919903.1
Xenopus tropicalis (tropical clawed frog) LOC100487067 XP_002942196.1
Xenopus tropicalis (tropical clawed frog) LOC100491383 XP_004920491.1
Xenopus tropicalis (tropical clawed frog) LOC101730817 XP_004913914.1
Xenopus tropicalis (tropical clawed frog) LOC101732908 XP_004917038.1
Xenopus tropicalis (tropical clawed frog) LOC101733656 XP_004917046.1
Xenopus tropicalis (tropical clawed frog) LOC101734285 XP_004917055.1
Xenopus tropicalis (tropical clawed frog) LOC101731908 XP_004919470.1
Xenopus tropicalis (tropical clawed frog) LOC100496089 XP_002943318.1
Xenopus tropicalis (tropical clawed frog) LOC100496244 XP_002943319.1
Xenopus tropicalis (tropical clawed frog) LOC100486008 XP_004919104.1

Gene Ontology

The following LOC101730817 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101730817 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa09282 XM_004913857.3
Latest version!		 Xenopus tropicalis histone H2A type 1-like (LOC101730817), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OXa09265 XM_004913857.4
Latest version!		 Xenopus tropicalis histone H2A type 1 (LOC101730817), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa09282
Clone ID Related Accession (Same CDS sequence) XM_004913857.3
Accession Version XM_004913857.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product histone H2A type 1-like
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_004913857.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
ATGTCCGGAA GAGGCAAGCA AGGCGGGAAG GTTCGGGCTA AGGCCAAGAC CCGCTCATCC 
CGGGCTGGGC TGCAGTTCCC AGTTGGCCGA GTTCACAGGC TCTTGAGAAA GGGCAATTAT 
GCTGAGCGGG TGGGAGCCGG AGCTCCGGTC TATCTGGCCG CAGTGCTCGA ATACCTGACC 
GCTGAGATCC TGGAGTTGGC CGGGAACGCT GCCCGGGATA ACAAGAAGAC CCGTATCATC 
CCCAGGCACC TGCAGCTCGC TGTGCGCAAT GATGAGGAGC TGAACAAACT GCTCGGAGGA 
GTCACTATCG CTCAGGGCGG GGTCCTGCCC AACATCCAGT CCGTGCTGCT GCCCAAGAAA 
ACCGAGAGCT CCAAGGCGGC CAAGAGCAAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_004913914.1
CDS33..425
Translation

Target ORF information:

RefSeq Version XM_004913857.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis histone H2A type 1-like (LOC101730817), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_004913857.3

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGTCCGGAA GAGGCAAGCA AGGCGGGAAG GTTCGGGCTA AGGCCAAGAC CCGCTCATCC 
CGGGCTGGGC TGCAGTTCCC AGTTGGCCGA GTTCACAGGC TCTTGAGAAA GGGCAATTAT 
GCTGAGCGGG TGGGAGCCGG AGCTCCGGTC TATCTGGCCG CAGTGCTCGA ATACCTGACC 
GCTGAGATCC TGGAGTTGGC CGGGAACGCT GCCCGGGATA ACAAGAAGAC CCGTATCATC 
CCCAGGCACC TGCAGCTCGC TGTGCGCAAT GATGAGGAGC TGAACAAACT GCTCGGAGGA 
GTCACTATCG CTCAGGGCGG GGTCCTGCCC AACATCCAGT CCGTGCTGCT GCCCAAGAAA 
ACCGAGAGCT CCAAGGCGGC CAAGAGCAAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa09265
Clone ID Related Accession (Same CDS sequence) XM_004913857.4
Accession Version XM_004913857.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product histone H2A type 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030685.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_004913857.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
ATGTCCGGAA GAGGCAAACA AGGCGGGAAG GTTCGGGCTA AGGCCAAGAC CCGCTCATCC 
CGGGCTGGGC TGCAGTTCCC AGTTGGCCGA GTTCACAGGC TCTTGAGAAA GGGCAATTAT 
GCTGAGCGGG TGGGAGCCGG AGCTCCGGTC TATCTGGCCG CAGTGCTCGA ATACCTGACC 
GCTGAGATCC TGGAGTTGGC CGGGAACGCT GCCCGGGATA ACAAGAAGAC CCGTATCATC 
CCCAGGCACC TGCAGCTCGC TGTGCGCAAT GATGAGGAGC TGAACAAACT GCTCGGAGGA 
GTCACTATCG CTCAGGGCGG GGTCCTGCCC AACATCCAGT CCGTGCTGCT GCCCAAGAAA 
ACCGAGAGCT CCAAGGCGGC CAAGAGCAAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_004913914.1
CDS16..408
Translation

Target ORF information:

RefSeq Version XM_004913857.4
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis histone H2A type 1 (LOC101730817), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_004913857.4

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGTCCGGAA GAGGCAAACA AGGCGGGAAG GTTCGGGCTA AGGCCAAGAC CCGCTCATCC 
CGGGCTGGGC TGCAGTTCCC AGTTGGCCGA GTTCACAGGC TCTTGAGAAA GGGCAATTAT 
GCTGAGCGGG TGGGAGCCGG AGCTCCGGTC TATCTGGCCG CAGTGCTCGA ATACCTGACC 
GCTGAGATCC TGGAGTTGGC CGGGAACGCT GCCCGGGATA ACAAGAAGAC CCGTATCATC 
CCCAGGCACC TGCAGCTCGC TGTGCGCAAT GATGAGGAGC TGAACAAACT GCTCGGAGGA 
GTCACTATCG CTCAGGGCGG GGTCCTGCCC AACATCCAGT CCGTGCTGCT GCCCAAGAAA 
ACCGAGAGCT CCAAGGCGGC CAAGAGCAAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed