LINJ_11_0620 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_11_0620
Entrez Gene ID	10966436
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392206.1	XP_003392254.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_11_0620 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_11_0620 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07700	XM_003392206.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_11_0620 ( XM_003392206.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392254.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07700
Clone ID Related Accession (Same CDS sequence)	XM_003392206.1
Accession Version	XM_003392206.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3216bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009395). COMPLETENESS: incomplete on both ends.

ATGGACAACC TGCTGAGCAG CAGCGACTTC ACTGCGACGT TGTTGCCGTG GGCCGTTTTC 
AGTTCTTCAG ACGTCCCCGA AGTGACTAAG AGTGAGCAGC AGCAGCAGCA ACAGGCACCC 
TCGCAGGCCT TCAGACGCCT GCCGACTCCT GTGCAGACAA GATCGATTCC TTTTATGCCC 
AGCATGGACG GTCCCTTCCC CTTTTCGGAT TCTGCAGGCG GTGAGGCTCC ACAGCAGTTC 
TCCGCATTGC CGTTGCAACA GCGACACCCG TCGTTTATTT CCCAGAGCTT CTCCAAGGAG 
TTCCGCACAG TGAATCAGTA CACCGCGTCT TCCTTTGTGC ACGCGCTCGA CACGAAAGCT 
TCTGCCGCCA CCGATCCCCA CCTTGTGAGC GCCCACGGCA GTTTTCCGAT GCCATTGAAC 
GCGTCGTCGG CGAACCAGGC GGAAGGGGAA AATCTAAGCT GTGCCATCTC CTACAGCAAC 
AACCACGGGG AGGCTTGCGG CGATGAGCGG TCGCGACCAT CGCGTCAAGC ACACGTGCAC 
GGGAGCGCTT CATTCTTCTC AGCGTCGCTG TCGTCGAGAT CTTCCTCGTT ACTGTCGCCA 
TTGACGCCCG CTCCAGAGGA GCACATTACC GGGTACACCT CCGTTATCCT GCCGACGGTG 
CCTCCCTCCT TCACCGGCGA AGACTACTAC GAACATGCGA TGCATGTTCA GGTAGAGTTT 
GTCAAGCAGC TGTGCGACGG CACTGGTGGC AACGATAGCA ACGGGAGCGG CAAGCTGGAG 
GAGTTGGGCA GGTCGTGCGA TACGTCTCGC AGCTCTTCGC TGCAACGCCT GCAGCAGTCG 
GCTTCTCTGC ACGTGAAGGC AGGCAGCTTT GACGGCCTGT CGGCAGCACC GGGGTCTCGA 
GCGGCCATGG GGGCGGCGGC ATCGAGTGCG CCGGTTGCAC CGGCGCCGCC GCCTTTGAGC 
ACGTTCCAAC CACTCAGCAC TGCCACGACT GGCTCGGACG AGTATCGGGC GTATTCGTCC 
GCCAGCGCCG CCGGTGCTGG CACCGTGCAG GACGCACCGA CCGGGGTCAA CCAATTGAAA 
GGCAGCGCGC ACGCGCAGCT TCAGGCGTCT TCGGGGGACT TCCAAACACC GCTGTTGCCG 
TCGCAGGGGA TGGTCCTCCT CCAGCTGCCG CCGCCGCAGC ATCGAGCTCC TTTTACTTCA 
TCTCCGTTGC TGGCGCAGAC GTGGACTAGC ACTGCTGGGG CTGCGAATGG CGAAGAAGTG 
GCTGCCCCCA GTAGCGGCCA ACAGCAACTT CAATTAAACG CTCATTCGCA GTCGAACTCG 
CGCCAGTACT CTGTCGGGGC CACATCAGGG GCGGCGACGT TTGTAGGTCC GGCTTGGTCT 
GGCAGCGGTG TCTACACAAC TTCACCAGCG CAATCCTTCA ATGCTTCCAA TGGCTACCAC 
ACAGGCAGCG GCACGCCCCC GTCAGGTGGC CCAGCACATC TGATCATGTT AGTGCCTGCG 
TCCAGTGAAA ACTCGTCTAC AGGCCACTCG ACGCAAGCTC AGCAACACCT TTACGCCATG 
CAGGTGCCGG CTCAGACTCT CTCTACCAGC GAGACAGCCG CCGCGCCTCG TTATGTATCT 
TCTCACTGCA GTGGCGCTGT ACCGTCCCCA TCGATGCAGC TGTCGAGCCC CACAACGGTG 
GCTTCTGGTA GCGGTGCCAG TGCCGTCCCC CTGCTGTACG TAACAGCACC GACAGCTTTT 
GCGGGGTTCC CGCCCACGGC GGCGGGGCGT CAGGTGAACA CATCGCCCCC CTCCAGCGTC 
TCTGGCCACT CGTGCTCCGT CAGCATGACA CAAGCTTCTG CACCAGAGAT ATCTTCGCCG 
AGCTCGCACT ACCTGTACCT GCACACCTAT CCTCCAGCGA ACCACTCGCC ATCGCGGCCG 
CTGCCCCTGC AGCAGTACTC AGGGCACTTC CCCTCACAAG TGCCTAGCGC GGGTATGCCG 
AAAGCGGCCG AGCAGGCAGC CTCGGCCTCC CTGCACGCCA GGACGCCATC GCCCTTGGGC 
ACGGCAGCCG CAGCGCATCT GCCGCACGCC ATGAGCACCG AGGCCTTCTC TCCAGGCAGC 
AAGATGGCTG GGCTGAAGTG CCCTAGCATC CGGCCGGTAG CGCCTGCGAC AAGCACAGAT 
ATGCTGCGCA AGCAGGTTAA TGTCCACGGT GCCATGATGA ACGTGCTGCC CTTTTACCCG 
TACAACGAGA GTGCCCCACC CGCGCTGACG GCGCCAATTG TGACGGGGAC CCGATCGGCC 
AGCAACAGCA CTCTCGTGCA GTCCTTGAGC GGGTCGGGCT GGTCGTCGCG GTCCGTGAAT 
AGCAACACAG AGTGCAACCT GGACGGAAGT CGGCGATCAC TGGACGGTTT TAGGAGCCAC 
GATGGAGCGA AGGCGTCCTC TTGCACGTTG AGAGGTGACA CGCCCTCGCT GGAGAACGCG 
CCTGTGTTGC CCATTTTCAT TCAAATGTTT CCGTGCGAAC TGCGTGACCG CGTCGGCCTA 
CTGAACCGCG TGATAGAAGC GACGTGCGGG CGTGACGCTG GTCTTGTGCA GAGCTTCGAA 
ACCCGTTCCG AAACATCCTT CATCGCCCAT GTGCGGACGA ACAACGTGTG GGAGTTGATC 
TACAAGTTGC GGTGCCGTGT GCTGATGGAT CGGTTTGGCT TCTGGTACGC GGCCGACATC 
GATCAGTATG TGCGCATGAA GGAGTACTGC GAAAGTGTTC GGCGCCTGCC GCAGCAGACG 
AGGCATTTCC AGACTGATGG GCTGCCCTGC ATGCCGCTCG TCGTGGAGCT GTCGCGCTCA 
CTGGATCGCG GGCTGGTCCC TGAAAACACT GGACCGCGCT GCTTCGACGA GCTCGTGCCG 
ATCGCCGCCG TGGATCGCCA TCGTTCCCGC CTGCAAGGGT CGTCGTCGGC GCACAATGGC 
CACTCCAACG CGAGCATGAG CGGCAAGGCC GTGGCCGCCA GCGGCGCCTC TGCAGCTGGC 
GGTAGCGTTC TCCTCACTAG CGTTGGCGAT GTGCGATCGC TGCATGGCGG GTCGCCGGTT 
TTTCCGACCA ACAATGGCCA TGCGATGATG TTGTCACCGC ACATGGTGCC AGTATTGGCG 
GGTGGTAGCT ACAGGGCTGG CGGTAGCACG AGTGGCAGCA GTGCGCAGGT GATTCACATG 
GACCCAAAGT TCCTGCCACC ATCCTTTGCC ATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392254.1
CDS	1..3216
Translation	MDNLLSSSDFTATLLPWAVFSSSDVPEVTKSEQQQQQQAPSQAFRRLPTPVQTRSIPFMPSMDGPFPFSDSAGGEAPQQFSALPLQQRHPSFISQSFSKEFRTVNQYTASSFVHALDTKASAATDPHLVSAHGSFPMPLNASSANQAEGENLSCAISYSNNHGEACGDERSRPSRQAHVHGSASFFSASLSSRSSSLLSPLTPAPEEHITGYTSVILPTVPPSFTGEDYYEHAMHVQVEFVKQLCDGTGGNDSNGSGKLEELGRSCDTSRSSSLQRLQQSASLHVKAGSFDGLSAAPGSRAAMGAAASSAPVAPAPPPLSTFQPLSTATTGSDEYRAYSSASAAGAGTVQDAPTGVNQLKGSAHAQLQASSGDFQTPLLPSQGMVLLQLPPPQHRAPFTSSPLLAQTWTSTAGAANGEEVAAPSSGQQQLQLNAHSQSNSRQYSVGATSGAATFVGPAWSGSGVYTTSPAQSFNASNGYHTGSGTPPSGGPAHLIMLVPASSENSSTGHSTQAQQHLYAMQVPAQTLSTSETAAAPRYVSSHCSGAVPSPSMQLSSPTTVASGSGASAVPLLYVTAPTAFAGFPPTAAGRQVNTSPPSSVSGHSCSVSMTQASAPEISSPSSHYLYLHTYPPANHSPSRPLPLQQYSGHFPSQVPSAGMPKAAEQAASASLHARTPSPLGTAAAAHLPHAMSTEAFSPGSKMAGLKCPSIRPVAPATSTDMLRKQVNVHGAMMNVLPFYPYNESAPPALTAPIVTGTRSASNSTLVQSLSGSGWSSRSVNSNTECNLDGSRRSLDGFRSHDGAKASSCTLRGDTPSLENAPVLPIFIQMFPCELRDRVGLLNRVIEATCGRDAGLVQSFETRSETSFIAHVRTNNVWELIYKLRCRVLMDRFGFWYAADIDQYVRMKEYCESVRRLPQQTRHFQTDGLPCMPLVVELSRSLDRGLVPENTGPRCFDELVPIAAVDRHRSRLQGSSSAHNGHSNASMSGKAVAASGASAAGGSVLLTSVGDVRSLHGGSPVFPTNNGHAMMLSPHMVPVLAGGSYRAGGSTSGSSAQVIHMDPKFLPPSFAM

Target ORF information:

RefSeq Version	XM_003392206.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392206.1

ORF Insert Sequence:

ATGGACAACC TGCTGAGCAG CAGCGACTTC ACTGCGACGT TGTTGCCGTG GGCCGTTTTC 
AGTTCTTCAG ACGTCCCCGA AGTGACTAAG AGTGAGCAGC AGCAGCAGCA ACAGGCACCC 
TCGCAGGCCT TCAGACGCCT GCCGACTCCT GTGCAGACAA GATCGATTCC TTTTATGCCC 
AGCATGGACG GTCCCTTCCC CTTTTCGGAT TCTGCAGGCG GTGAGGCTCC ACAGCAGTTC 
TCCGCATTGC CGTTGCAACA GCGACACCCG TCGTTTATTT CCCAGAGCTT CTCCAAGGAG 
TTCCGCACAG TGAATCAGTA CACCGCGTCT TCCTTTGTGC ACGCGCTCGA CACGAAAGCT 
TCTGCCGCCA CCGATCCCCA CCTTGTGAGC GCCCACGGCA GTTTTCCGAT GCCATTGAAC 
GCGTCGTCGG CGAACCAGGC GGAAGGGGAA AATCTAAGCT GTGCCATCTC CTACAGCAAC 
AACCACGGGG AGGCTTGCGG CGATGAGCGG TCGCGACCAT CGCGTCAAGC ACACGTGCAC 
GGGAGCGCTT CATTCTTCTC AGCGTCGCTG TCGTCGAGAT CTTCCTCGTT ACTGTCGCCA 
TTGACGCCCG CTCCAGAGGA GCACATTACC GGGTACACCT CCGTTATCCT GCCGACGGTG 
CCTCCCTCCT TCACCGGCGA AGACTACTAC GAACATGCGA TGCATGTTCA GGTAGAGTTT 
GTCAAGCAGC TGTGCGACGG CACTGGTGGC AACGATAGCA ACGGGAGCGG CAAGCTGGAG 
GAGTTGGGCA GGTCGTGCGA TACGTCTCGC AGCTCTTCGC TGCAACGCCT GCAGCAGTCG 
GCTTCTCTGC ACGTGAAGGC AGGCAGCTTT GACGGCCTGT CGGCAGCACC GGGGTCTCGA 
GCGGCCATGG GGGCGGCGGC ATCGAGTGCG CCGGTTGCAC CGGCGCCGCC GCCTTTGAGC 
ACGTTCCAAC CACTCAGCAC TGCCACGACT GGCTCGGACG AGTATCGGGC GTATTCGTCC 
GCCAGCGCCG CCGGTGCTGG CACCGTGCAG GACGCACCGA CCGGGGTCAA CCAATTGAAA 
GGCAGCGCGC ACGCGCAGCT TCAGGCGTCT TCGGGGGACT TCCAAACACC GCTGTTGCCG 
TCGCAGGGGA TGGTCCTCCT CCAGCTGCCG CCGCCGCAGC ATCGAGCTCC TTTTACTTCA 
TCTCCGTTGC TGGCGCAGAC GTGGACTAGC ACTGCTGGGG CTGCGAATGG CGAAGAAGTG 
GCTGCCCCCA GTAGCGGCCA ACAGCAACTT CAATTAAACG CTCATTCGCA GTCGAACTCG 
CGCCAGTACT CTGTCGGGGC CACATCAGGG GCGGCGACGT TTGTAGGTCC GGCTTGGTCT 
GGCAGCGGTG TCTACACAAC TTCACCAGCG CAATCCTTCA ATGCTTCCAA TGGCTACCAC 
ACAGGCAGCG GCACGCCCCC GTCAGGTGGC CCAGCACATC TGATCATGTT AGTGCCTGCG 
TCCAGTGAAA ACTCGTCTAC AGGCCACTCG ACGCAAGCTC AGCAACACCT TTACGCCATG 
CAGGTGCCGG CTCAGACTCT CTCTACCAGC GAGACAGCCG CCGCGCCTCG TTATGTATCT 
TCTCACTGCA GTGGCGCTGT ACCGTCCCCA TCGATGCAGC TGTCGAGCCC CACAACGGTG 
GCTTCTGGTA GCGGTGCCAG TGCCGTCCCC CTGCTGTACG TAACAGCACC GACAGCTTTT 
GCGGGGTTCC CGCCCACGGC GGCGGGGCGT CAGGTGAACA CATCGCCCCC CTCCAGCGTC 
TCTGGCCACT CGTGCTCCGT CAGCATGACA CAAGCTTCTG CACCAGAGAT ATCTTCGCCG 
AGCTCGCACT ACCTGTACCT GCACACCTAT CCTCCAGCGA ACCACTCGCC ATCGCGGCCG 
CTGCCCCTGC AGCAGTACTC AGGGCACTTC CCCTCACAAG TGCCTAGCGC GGGTATGCCG 
AAAGCGGCCG AGCAGGCAGC CTCGGCCTCC CTGCACGCCA GGACGCCATC GCCCTTGGGC 
ACGGCAGCCG CAGCGCATCT GCCGCACGCC ATGAGCACCG AGGCCTTCTC TCCAGGCAGC 
AAGATGGCTG GGCTGAAGTG CCCTAGCATC CGGCCGGTAG CGCCTGCGAC AAGCACAGAT 
ATGCTGCGCA AGCAGGTTAA TGTCCACGGT GCCATGATGA ACGTGCTGCC CTTTTACCCG 
TACAACGAGA GTGCCCCACC CGCGCTGACG GCGCCAATTG TGACGGGGAC CCGATCGGCC 
AGCAACAGCA CTCTCGTGCA GTCCTTGAGC GGGTCGGGCT GGTCGTCGCG GTCCGTGAAT 
AGCAACACAG AGTGCAACCT GGACGGAAGT CGGCGATCAC TGGACGGTTT TAGGAGCCAC 
GATGGAGCGA AGGCGTCCTC TTGCACGTTG AGAGGTGACA CGCCCTCGCT GGAGAACGCG 
CCTGTGTTGC CCATTTTCAT TCAAATGTTT CCGTGCGAAC TGCGTGACCG CGTCGGCCTA 
CTGAACCGCG TGATAGAAGC GACGTGCGGG CGTGACGCTG GTCTTGTGCA GAGCTTCGAA 
ACCCGTTCCG AAACATCCTT CATCGCCCAT GTGCGGACGA ACAACGTGTG GGAGTTGATC 
TACAAGTTGC GGTGCCGTGT GCTGATGGAT CGGTTTGGCT TCTGGTACGC GGCCGACATC 
GATCAGTATG TGCGCATGAA GGAGTACTGC GAAAGTGTTC GGCGCCTGCC GCAGCAGACG 
AGGCATTTCC AGACTGATGG GCTGCCCTGC ATGCCGCTCG TCGTGGAGCT GTCGCGCTCA 
CTGGATCGCG GGCTGGTCCC TGAAAACACT GGACCGCGCT GCTTCGACGA GCTCGTGCCG 
ATCGCCGCCG TGGATCGCCA TCGTTCCCGC CTGCAAGGGT CGTCGTCGGC GCACAATGGC 
CACTCCAACG CGAGCATGAG CGGCAAGGCC GTGGCCGCCA GCGGCGCCTC TGCAGCTGGC 
GGTAGCGTTC TCCTCACTAG CGTTGGCGAT GTGCGATCGC TGCATGGCGG GTCGCCGGTT 
TTTCCGACCA ACAATGGCCA TGCGATGATG TTGTCACCGC ACATGGTGCC AGTATTGGCG 
GGTGGTAGCT ACAGGGCTGG CGGTAGCACG AGTGGCAGCA GTGCGCAGGT GATTCACATG 
GACCCAAAGT TCCTGCCACC ATCCTTTGCC ATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_11_0620 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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