Gene Symbol | FAN1 |
Entrez Gene ID | 508171 |
Full Name | FANCD2 and FANCI associated nuclease 1 |
Synonyms | MTMR15 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » FAN1 cDNA ORF clone
Gene Symbol | FAN1 |
Entrez Gene ID | 508171 |
Full Name | FANCD2 and FANCI associated nuclease 1 |
Synonyms | MTMR15 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005221871.3 | XP_005221928.1 | fanconi-associated nuclease 1 isoform X3 |
XM_005221870.3 | XP_005221927.1 | fanconi-associated nuclease 1 isoform X1 |
XM_005221870.4 | XP_005221927.1 | fanconi-associated nuclease 1 isoform X1 |
NM_001164670.1 | NP_001158142.1 | fanconi-associated nuclease 1 |
XM_005221871.4 | XP_005221928.1 | fanconi-associated nuclease 1 isoform X2 |
XM_015459217.1 | XP_015314703.1 | fanconi-associated nuclease 1 isoform X2 |
Bos taurus (cattle) | FAN1 | NP_001158142.1 |
Rattus norvegicus (Norway rat) | Fan1 | NP_001178562.1 |
Danio rerio (zebrafish) | fan1 | NP_001038546.2 |
Caenorhabditis elegans (roundworm) | fan-1 | NP_500997.1 |
Neurospora crassa | NCU03036 | XP_964041.2 |
Pan troglodytes (chimpanzee) | FAN1 | XP_510266.2 |
Canis lupus familiaris (dog) | FAN1 | XP_005618326.1 |
Gallus gallus (chicken) | FAN1 | XP_004943817.1 |
Homo sapiens (human) | FAN1 | NP_055782.3 |
Magnaporthe oryzae (rice blast fungus) | MGG_00351 | XP_003718732.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC146.06c | NP_595395.1 |
FAN1 | XP_001109813.1 | |
Mus musculus (house mouse) | Fan1 | NP_808561.2 |
Xenopus tropicalis (tropical clawed frog) | fan1 | XP_002934961.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
A second generation radiation hybrid map to aid the assembly of the bovine genome sequence.
Jann OC, Aerts J, Jones M, Hastings N, Law A, McKay S, Marques E, Prasad A, Yu J, Moore SS, Floriot S, Mah? MF, Eggen A, Silveri L, Negrini R, Milanesi E, Ajmone-Marsan P, Valentini A, Marchitelli C, Savarese MC, Janitz M, Herwig R, Hennig S, Gorni C, Connor EE, Sonstegard TS, Smith T, Dr?gem?ller C, Williams JL
BMC genomics7283(2006 Nov)
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index.
Sonstegard TS, Capuco AV, White J, Van Tassell CP, Connor EE, Cho J, Sultana R, Shade L, Wray JE, Wells KD, Quackenbush J
Mammalian genome : official journal of the International Mammalian Genome Society13(7)373-9(2002 Jul)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following FAN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FAN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa30886 | |
Clone ID Related Accession (Same CDS sequence) | XM_005221871.3 , XM_005221871.4 | |
Accession Version | XM_005221871.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2991bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104534.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005221871.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005221928.1 |
CDS | 422..3412 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005221871.3 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa30886 | |
Clone ID Related Accession (Same CDS sequence) | XM_005221871.3 , XM_005221871.4 | |
Accession Version | XM_005221871.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2991bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037348.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005221871.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005221928.1 |
CDS | 431..3421 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005221871.4 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa94216 | |
Clone ID Related Accession (Same CDS sequence) | XM_015459217.1 | |
Accession Version | XM_015459217.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3021bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104534.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015314703.1 |
CDS | 422..3442 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015459217.1 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa30885 | |
Clone ID Related Accession (Same CDS sequence) | XM_005221870.3 , XM_005221870.4 , NM_001164670.1 | |
Accession Version | NM_001164670.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3072bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EW680984.1, BE480124.1, DY466443.1, CR382935.1, DV878134.1, CK831352.1, CO896626.1 and CK769657.1. On Sep 10, 2009 this sequence version replaced XM_584913.4. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001158142.1 |
CDS | 426..3497 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001164670.1 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa30885 | |
Clone ID Related Accession (Same CDS sequence) | XM_005221870.3 , XM_005221870.4 , NM_001164670.1 | |
Accession Version | XM_005221870.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3072bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104534.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005221870.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005221927.1 |
CDS | 434..3505 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005221870.3 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa30885 | |
Clone ID Related Accession (Same CDS sequence) | XM_005221870.3 , XM_005221870.4 , NM_001164670.1 | |
Accession Version | XM_005221870.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3072bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | fanconi-associated nuclease 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037348.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005221870.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005221927.1 |
CDS | 443..3514 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005221870.4 |
1 | ATGATGTCTG TAGGCAAATC CTCCAAAAAA AGGCCTCGTA CAAGTTTATC AAGCAGCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
A second generation radiation hybrid map to aid the assembly of the bovine genome sequence. |
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |