Gene Symbol |
TBPL1 |
Entrez Gene ID |
613818 |
Full Name |
TATA-box binding protein like 1 |
General protein information |
- Preferred Names
TATA-box binding protein like 1
Names
TATA box-binding protein-like protein 1 TATA box-binding protein related factor 2 TBP-like 1 TBP-like factor TBP-like protein 1 TBP-related factor 2 TBP-related protein
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_024996825.1 |
XP_024852593.1 |
TATA box-binding protein-like protein 1 isoform X1 |
NM_001076290.2 |
NP_001069758.1 |
TATA box-binding protein-like protein 1 |
Pan troglodytes (chimpanzee) |
TBPL1 |
NP_001092762.1 |
Bos taurus (cattle) |
TBPL1 |
NP_001069758.1 |
Mus musculus (house mouse) |
Tbpl1 |
NP_035733.1 |
Homo sapiens (human) |
TBPL1 |
NP_001240605.1 |
Gallus gallus (chicken) |
TBPL1 |
NP_990086.1 |
Danio rerio (zebrafish) |
tbpl1 |
NP_991285.1 |
Canis lupus familiaris (dog) |
TBPL1 |
NP_001239188.1 |
Rattus norvegicus (Norway rat) |
Tbpl1 |
NP_001120673.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP007517 |
XP_308361.4 |
Caenorhabditis elegans (roundworm) |
tlf-1 |
NP_492356.1 |
Xenopus tropicalis (tropical clawed frog) |
tbpl1 |
NP_001004932.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TBPL1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TBPL1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa01037 |
Clone ID Related Accession (Same CDS sequence) |
XM_024996825.1
, NM_001076290.2
|
Accession Version |
NM_001076290.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 561bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-10-18 |
Organism |
Bos taurus(cattle) |
Product |
TATA box-binding protein-like protein 1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC109666.1. On Aug 31, 2012 this sequence version replaced NM_001076290.1.
##Evidence-Data-START##
Transcript exon combination :: BC109666.1, EU140625.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541
| ATGGATGCAG ACAGTGATGT TGCACTGGAC ATTCTAATTA CAAATGTAGT ATGTGTTTTT AGAACAAGAT GCCATTTGAA CTTAAGGAAG ATTGCTTTAG AGGGAGCAAA CGTAATTTAT AAGCGTGATG TTGGAAAAGT ATTAATGAAG CTTAGAAAGC CTAGAATTAC AGCTACAATT TGGTCCTCAG GAAAAATTAT TTGCACTGGA GCAACAAGTG AAGAAGAAGC TAAATTTGGT GCCAGACGTT TAGCCCGTAG TCTCCAGAAA CTAGGATTTC AGGTAATATT TACAGATTTT AAGGTTGTTA ACGTTTTGGC AGTGTGTAAC ATGCCGTTTG AAATCCGTTT GCCAGAATTC ACAAAGAACA ATAGACCTCA TGCCAGTTAC GAACCTGAGC TTCATCCTGC TGTGTGCTAT CGGATAAAAT CGCTAAGAGC TACATTACAG ATTTTTTCAA CAGGAAGTAT CACAGTAACA GGACCCAATG TAAAGGCTGT TGCTACTGCT GTGGAACAGA TTTACCCATT TGTGTTTGAA AGCAGGAAAG AGATTTTATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001069758.1 |
CDS | 174..734 |
Translation | |
Target ORF information:
RefSeq Version | NM_001076290.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TATA-box binding protein like 1 (TBPL1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001076290.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541
| ATGGATGCAG ACAGTGATGT TGCACTGGAC ATTCTAATTA CAAATGTAGT ATGTGTTTTT AGAACAAGAT GCCATTTGAA CTTAAGGAAG ATTGCTTTAG AGGGAGCAAA CGTAATTTAT AAGCGTGATG TTGGAAAAGT ATTAATGAAG CTTAGAAAGC CTAGAATTAC AGCTACAATT TGGTCCTCAG GAAAAATTAT TTGCACTGGA GCAACAAGTG AAGAAGAAGC TAAATTTGGT GCCAGACGTT TAGCCCGTAG TCTCCAGAAA CTAGGATTTC AGGTAATATT TACAGATTTT AAGGTTGTTA ACGTTTTGGC AGTGTGTAAC ATGCCGTTTG AAATCCGTTT GCCAGAATTC ACAAAGAACA ATAGACCTCA TGCCAGTTAC GAACCTGAGC TTCATCCTGC TGTGTGCTAT CGGATAAAAT CGCTAAGAGC TACATTACAG ATTTTTTCAA CAGGAAGTAT CACAGTAACA GGACCCAATG TAAAGGCTGT TGCTACTGCT GTGGAACAGA TTTACCCATT TGTGTTTGAA AGCAGGAAAG AGATTTTATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa01037 |
Clone ID Related Accession (Same CDS sequence) |
XM_024996825.1
, NM_001076290.2
|
Accession Version |
XM_024996825.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 561bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
TATA box-binding protein-like protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037336.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541
| ATGGATGCAG ACAGTGATGT TGCACTGGAC ATTCTAATTA CAAATGTAGT ATGTGTTTTT AGAACAAGAT GCCATTTGAA CTTAAGGAAG ATTGCTTTAG AGGGAGCAAA CGTAATTTAT AAGCGTGATG TTGGAAAAGT ATTAATGAAG CTTAGAAAGC CTAGAATTAC AGCTACAATT TGGTCCTCAG GAAAAATTAT TTGCACTGGA GCAACAAGTG AAGAAGAAGC TAAATTTGGT GCCAGACGTT TAGCCCGTAG TCTCCAGAAA CTAGGATTTC AGGTAATATT TACAGATTTT AAGGTTGTTA ACGTTTTGGC AGTGTGTAAC ATGCCGTTTG AAATCCGTTT GCCAGAATTC ACAAAGAACA ATAGACCTCA TGCCAGTTAC GAACCTGAGC TTCATCCTGC TGTGTGCTAT CGGATAAAAT CGCTAAGAGC TACATTACAG ATTTTTTCAA CAGGAAGTAT CACAGTAACA GGACCCAATG TAAAGGCTGT TGCTACTGCT GTGGAACAGA TTTACCCATT TGTGTTTGAA AGCAGGAAAG AGATTTTATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024852593.1 |
CDS | 346..906 |
Translation | |
Target ORF information:
RefSeq Version | XM_024996825.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus TATA-box binding protein like 1 (TBPL1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024996825.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541
| ATGGATGCAG ACAGTGATGT TGCACTGGAC ATTCTAATTA CAAATGTAGT ATGTGTTTTT AGAACAAGAT GCCATTTGAA CTTAAGGAAG ATTGCTTTAG AGGGAGCAAA CGTAATTTAT AAGCGTGATG TTGGAAAAGT ATTAATGAAG CTTAGAAAGC CTAGAATTAC AGCTACAATT TGGTCCTCAG GAAAAATTAT TTGCACTGGA GCAACAAGTG AAGAAGAAGC TAAATTTGGT GCCAGACGTT TAGCCCGTAG TCTCCAGAAA CTAGGATTTC AGGTAATATT TACAGATTTT AAGGTTGTTA ACGTTTTGGC AGTGTGTAAC ATGCCGTTTG AAATCCGTTT GCCAGAATTC ACAAAGAACA ATAGACCTCA TGCCAGTTAC GAACCTGAGC TTCATCCTGC TGTGTGCTAT CGGATAAAAT CGCTAAGAGC TACATTACAG ATTTTTTCAA CAGGAAGTAT CACAGTAACA GGACCCAATG TAAAGGCTGT TGCTACTGCT GTGGAACAGA TTTACCCATT TGTGTTTGAA AGCAGGAAAG AGATTTTATA A |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |