Gene Symbol | FTO |
Entrez Gene ID | 618622 |
Full Name | FTO, alpha-ketoglutarate dependent dioxygenase |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » FTO cDNA ORF clone
Gene Symbol | FTO |
Entrez Gene ID | 618622 |
Full Name | FTO, alpha-ketoglutarate dependent dioxygenase |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_015475778.1 | XP_015331264.1 | alpha-ketoglutarate-dependent dioxygenase FTO isoform X2 |
NM_001098142.1 | NP_001091611.1 | alpha-ketoglutarate-dependent dioxygenase FTO |
XM_015475778.2 | XP_015331264.1 | alpha-ketoglutarate-dependent dioxygenase FTO isoform X2 |
XM_024978596.1 | XP_024834364.1 | alpha-ketoglutarate-dependent dioxygenase FTO isoform X3 |
XM_010814570.2 | XP_010812872.1 | alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 |
XM_010814570.3 | XP_010812872.1 | alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 |
Xenopus tropicalis (tropical clawed frog) | fto | NP_001017273.1 |
Homo sapiens (human) | FTO | NP_001073901.1 |
Pan troglodytes (chimpanzee) | FTO | XP_510968.2 |
Gallus gallus (chicken) | FTO | NP_001172076.1 |
Bos taurus (cattle) | FTO | NP_001091611.1 |
Rattus norvegicus (Norway rat) | Fto | NP_001034802.1 |
FTO | XP_001092038.1 | |
Danio rerio (zebrafish) | fto | XP_001345910.4 |
Canis lupus familiaris (dog) | FTO | XP_535301.4 |
Mus musculus (house mouse) | Fto | NP_036066.2 |
FTO gene variants are associated with growth and carcass traits in cattle.
Jevsinek Skok D, Kunej T, Kovac M, Malovrh S, Potocnik K, Petric N, Zgur S, Dovc P, Horvat S
Animal genetics47(2)219-22(2016 Apr)
Impact of variation at the FTO locus on milk fat yield in Holstein dairy cattle.
Zielke LG, Bortfeldt RH, Reissmann M, Tetens J, Thaller G, Brockmann GA
PloS one8(5)e63406(2013)
Allelic polymorphism detected in the bovine FTO gene.
Zhang B, Zhang Y, Zhang L, Wang J, Li Z, Chen H
Molecular biotechnology49(3)257-62(2011 Nov)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
34 FTO polymorphisms revealed significant association of FTO variants with lean meat percentage in Simmental and Brown cattle breeds.
Title: FTO gene variants are associated with growth and carcass traits in cattle.
association signals not only provided evidence for at least two causative mutations in the FTO locus with a functional effect on milk but also milk protein yield
Title: Impact of variation at the FTO locus on milk fat yield in Holstein dairy cattle.
Haplotype frequencies and linkage disequilibrium (LD) coefficients of FTO single nucleotide polymorphisms in three Chinese indigenous cattle breeds were analyzed.
Title: Allelic polymorphism detected in the bovine FTO gene.
The following FTO gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FTO cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa41243 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098142.1 | |
Accession Version | NM_001098142.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1518bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-29 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC140478.1. On May 23, 2007 this sequence version replaced XM_870955.2. ##Evidence-Data-START## Transcript exon combination :: BC140478.1, HM777021.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGCGGA CCCCGACGGC CGAGGAACGA GAGCGCGAAG CTAAGAAACT GAGGCTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001091611.1 |
CDS | 19..1536 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001098142.1 |
1 | ATGAAGCGGA CCCCGACGGC CGAGGAACGA GAGCGCGAAG CTAAGAAACT GAGGCTTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28519 | |
Clone ID Related Accession (Same CDS sequence) | XM_010814570.2 , XM_010814570.3 | |
Accession Version | XM_010814570.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1536bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010814570.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812872.1 |
CDS | 206..1741 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010814570.2 |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28519 | |
Clone ID Related Accession (Same CDS sequence) | XM_010814570.2 , XM_010814570.3 | |
Accession Version | XM_010814570.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1536bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010814570.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812872.1 |
CDS | 160..1695 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010814570.3 |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa225211 | |
Clone ID Related Accession (Same CDS sequence) | XM_024978596.1 | |
Accession Version | XM_024978596.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1389bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024834364.1 |
CDS | 160..1548 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024978596.1 |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa93376 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475778.1 , XM_015475778.2 | |
Accession Version | XM_015475778.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1446bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015331264.1 |
CDS | 209..1654 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015475778.1 |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa93376 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475778.1 , XM_015475778.2 | |
Accession Version | XM_015475778.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1446bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | alpha-ketoglutarate-dependent dioxygenase FTO isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_015475778.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015331264.1 |
CDS | 160..1605 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015475778.2 |
1 | ATGCACAGAA GGGACAAGCA TAGAAAGACC AGAAAGCAAA TAAAAGTCAT CTGCTTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
FTO gene variants are associated with growth and carcass traits in cattle. |
Impact of variation at the FTO locus on milk fat yield in Holstein dairy cattle. |
Allelic polymorphism detected in the bovine FTO gene. |
A whole-genome assembly of the domestic cow, Bos taurus. |