TSR1 cDNA ORF clone, Calidris pugnax(ruff)

Gene
Clones
gRNAs

Summary

Gene Symbol	TSR1
Entrez Gene ID	106894490
Full Name	TSR1, ribosome maturation factor
Gene Type	protein-coding
Organism	Calidris pugnax(ruff)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014953150.1	XP_014808636.1	pre-rRNA-processing protein TSR1 homolog

Pathways from BioSystems
Gene Ontology

The following TSR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TSR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa73182	XM_014953150.1 Latest version!	Calidris pugnax TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

TSR1 ( XM_014953150.1 ) cDNA ORF clone, Calidris pugnax(ruff) -> XP_014808636.1 Calidris pugnax TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR1), mRNA.

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CloneID	OCa73182
Clone ID Related Accession (Same CDS sequence)	XM_014953150.1
Accession Version	XM_014953150.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2430bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-08
Organism	Calidris pugnax(ruff)
Product	pre-rRNA-processing protein TSR1 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090977.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTGGCGG CGGGCGCGCA CCGGCCCGGG CCGCTGAAGC AGCAGAACAA AGCGCACAAG 
GGCGGGAAGC ACAGCGGATC GTCGCACCGC CGTGCTGGAG GCCGCGTCTC CGTCAAGGCC 
CAGCCCCACC GGCGGATCCG CGACCTCAGC AGGGTGGACC GGAGGCACCA GGCGCTGCAG 
CTTCGCCGGC AGCGCAAGGA GGCGGTGCTG GCAGAGAAGC GGAGCTTGGG CAGCAGGGAT 
GGGCCCCCAC ACCTCGTGGT CCTGGTGCCG CTGCACAGCA GCGCTGCAGC CCATGACACC 
CTGCGCTTGC TGCAGAGCCA GGACTCTGCT GTTGTCCGTG TCCATGAGGG AAAAGCTGGT 
GGCTTTGCCC TTCTCTGCCC CCGTCTCAAG CAGCGCTGGC GCTTCGTGAC GGCACAGGCA 
GGGGACCGTC ATGCTGTCCT AGACCTAGCA AAGGTCGCCG ACTCCCTCCT GTTCATCCTG 
GATCCTGCAG ATGGCTGGGA CAGCGCAGGG GAATATTGCC TCTCCTGCCT CTTCGCACAG 
GGGCTGCCCA GTTACGCTCT TGCTGTCCCG GGGGGAGCTG ATTTGCCGCC TAAGAAGCGA 
ATAGATGCCA GGAAGAAACT GGCCAAAGCC ATCGAGAAGC GTTTTCCGGA GGCCAAGCTC 
TTCCCACTGA ACACGGAGCA GGAGTCCTCG CTGCTGCTGC GGCACCTGGC CACCCAGAAG 
CAGCGGCATC TGGCTTTTCG GGACAGACGG GCTCACCTCC TCGCCTACGC TGCTGAGTTC 
CTACCCGGTC AGGAGAGCGA CCTGGTTGGG ACCTTGAAAG TGTCTGGTTT TGTCCGGGGA 
CAGACCCTGG ATGTGAACAG CCTGGTGCAT ATTGTGGGGC ATGGAGACTT CCAGCTGAGC 
CAGGTGGATG CCCCCCCCGA CCCCCTCTCT TTGAACCCCC GCGTGGTTAA AGGACAGAAG 
AGGAGTCAGG ACATGGAGAT ACAGGATGAC TCTCTAAACG GTACCGATGA GATGGAGGAA 
GATGTTAAGG TCCTGATGAA GGCAGATCCA ACCAAGCAAG AGTCTTTGCA GTCAGAAGTG 
GTTCCTGATC CTATGGAAGG GGAGCAGACG TGGCCTACTG AAGAAGAACT GCAAGAAGCA 
GAGGCTTCTC TGAAGGCAAA CAGGAAGGTG GTGAAGGTCC CCAAAGGCAC ATCCAAGTAC 
CAAGCTGCCT GGATTGTAGA TGATGAAGAA GAGGGCAATC AGGAAGATGA TGACGATGAA 
GATGATGATG ACATCGATGA TGATATGATG GAAGAGGCAG TTTCCCAGGA GGGGGAAAGC 
AGCGAGGAGG GAGAGGAACC TGCAGAGGAG GAATGTGAGA CCATGACCGT TTCCGAGTGC 
TTGCGGGACG ACCAGTATGA TGAGAAAGTG GAGGAAGATG AAGAGATGCT GGAGAGGTAC 
AAACAGGAGA GAATGGATGA AATGTTTCCG GATGAGGTGG ACACGCCACG TGACGTACCT 
GCCAGAGTCC GGTTCCAGAA GTACAGGGGG CTGAAGAGCT TCCGAACTTC TCCATGGGAC 
CCCAAAGAGA ATCTCCCAAG GGATTATGCC AGGATTTTCC AGTTCCAGGA CTTCTCCCGG 
ACCAGAAAGA ACATCTTCCG GCAAATAGAG AAAGAGGAGA CTGAAGGAGC CTCGGTTGGC 
TGGTACGTTA CACTTCACAT CTGCAATGTC CCTGTCTCAG TGATGGAGAG CTTCAAAGAA 
GGGAAGCCCC TAGTCCTGTT CTCACTGCTT CCCCACGAAC AAAAGATGTC CGTGTTGAAT 
TTCCTGGTGC GGCGGCATCC GAGCAACAGT GAACCAGTGA AGGCAAAGGA GGAGCTGATC 
TTTCACTGTG GGTTCAGGCG GTTCCGAGCA TCCCCCCTGT TCTCCCAGCA CACCTCAGCT 
GATAAACACA AGCTGGAGCG TTTCCTGCGC CCGGACGCTG CCCTGGTGGT GACTGTTTAC 
GCTCCCATCA CTTTCCCTCC TGCCTCGGTG CTTCTTTTTA AACAGAGAAG TAACGGAATG 
CATGACCTCA TTGCCACGGG TTCTCTGCTC TCCGTGGACC CAGACAGAAT CGTCATCAAG 
CGGCTGGTGC TCAGTGGCCA CCCTTTCAAG ATCTTTACCA AGACGGCTGT CGTGCGATAC 
ATGTTCTTTA GCAGAGAGGA TGTGATGTGG TTCAAGCCAG TGGAGCTGAG AACAAAGTGG 
GGTCGTAGAG GACACATCAA GGAGCCGTTA GGGACCCACG GTCACATGAA GTGCCACTTT 
GATGGACAGC TAAAGTCCCA GGACACGGTG CTGCTGAACC TTTACAAGCG CGTTTTTCCT 
AAATGGACTT TTGATCCCCA CGTTCCAGAG CCCGTGCCGT GGGTGAGGAA CGAGAGCGCG 
CTGTCCGTGC AGGAGGTGGA AATGGAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014808636.1
CDS	113..2542
Translation	MVAAGAHRPGPLKQQNKAHKGGKHSGSSHRRAGGRVSVKAQPHRRIRDLSRVDRRHQALQLRRQRKEAVLAEKRSLGSRDGPPHLVVLVPLHSSAAAHDTLRLLQSQDSAVVRVHEGKAGGFALLCPRLKQRWRFVTAQAGDRHAVLDLAKVADSLLFILDPADGWDSAGEYCLSCLFAQGLPSYALAVPGGADLPPKKRIDARKKLAKAIEKRFPEAKLFPLNTEQESSLLLRHLATQKQRHLAFRDRRAHLLAYAAEFLPGQESDLVGTLKVSGFVRGQTLDVNSLVHIVGHGDFQLSQVDAPPDPLSLNPRVVKGQKRSQDMEIQDDSLNGTDEMEEDVKVLMKADPTKQESLQSEVVPDPMEGEQTWPTEEELQEAEASLKANRKVVKVPKGTSKYQAAWIVDDEEEGNQEDDDDEDDDDIDDDMMEEAVSQEGESSEEGEEPAEEECETMTVSECLRDDQYDEKVEEDEEMLERYKQERMDEMFPDEVDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQDFSRTRKNIFRQIEKEETEGASVGWYVTLHICNVPVSVMESFKEGKPLVLFSLLPHEQKMSVLNFLVRRHPSNSEPVKAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRPDAALVVTVYAPITFPPASVLLFKQRSNGMHDLIATGSLLSVDPDRIVIKRLVLSGHPFKIFTKTAVVRYMFFSREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRVFPKWTFDPHVPEPVPWVRNESALSVQEVEME

Target ORF information:

RefSeq Version	XM_014953150.1
Organism	Calidris pugnax(ruff)
Definition	Calidris pugnax TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014953150.1

ORF Insert Sequence:

ATGGTGGCGG CGGGCGCGCA CCGGCCCGGG CCGCTGAAGC AGCAGAACAA AGCGCACAAG 
GGCGGGAAGC ACAGCGGATC GTCGCACCGC CGTGCTGGAG GCCGCGTCTC CGTCAAGGCC 
CAGCCCCACC GGCGGATCCG CGACCTCAGC AGGGTGGACC GGAGGCACCA GGCGCTGCAG 
CTTCGCCGGC AGCGCAAGGA GGCGGTGCTG GCAGAGAAGC GGAGCTTGGG CAGCAGGGAT 
GGGCCCCCAC ACCTCGTGGT CCTGGTGCCG CTGCACAGCA GCGCTGCAGC CCATGACACC 
CTGCGCTTGC TGCAGAGCCA GGACTCTGCT GTTGTCCGTG TCCATGAGGG AAAAGCTGGT 
GGCTTTGCCC TTCTCTGCCC CCGTCTCAAG CAGCGCTGGC GCTTCGTGAC GGCACAGGCA 
GGGGACCGTC ATGCTGTCCT AGACCTAGCA AAGGTCGCCG ACTCCCTCCT GTTCATCCTG 
GATCCTGCAG ATGGCTGGGA CAGCGCAGGG GAATATTGCC TCTCCTGCCT CTTCGCACAG 
GGGCTGCCCA GTTACGCTCT TGCTGTCCCG GGGGGAGCTG ATTTGCCGCC TAAGAAGCGA 
ATAGATGCCA GGAAGAAACT GGCCAAAGCC ATCGAGAAGC GTTTTCCGGA GGCCAAGCTC 
TTCCCACTGA ACACGGAGCA GGAGTCCTCG CTGCTGCTGC GGCACCTGGC CACCCAGAAG 
CAGCGGCATC TGGCTTTTCG GGACAGACGG GCTCACCTCC TCGCCTACGC TGCTGAGTTC 
CTACCCGGTC AGGAGAGCGA CCTGGTTGGG ACCTTGAAAG TGTCTGGTTT TGTCCGGGGA 
CAGACCCTGG ATGTGAACAG CCTGGTGCAT ATTGTGGGGC ATGGAGACTT CCAGCTGAGC 
CAGGTGGATG CCCCCCCCGA CCCCCTCTCT TTGAACCCCC GCGTGGTTAA AGGACAGAAG 
AGGAGTCAGG ACATGGAGAT ACAGGATGAC TCTCTAAACG GTACCGATGA GATGGAGGAA 
GATGTTAAGG TCCTGATGAA GGCAGATCCA ACCAAGCAAG AGTCTTTGCA GTCAGAAGTG 
GTTCCTGATC CTATGGAAGG GGAGCAGACG TGGCCTACTG AAGAAGAACT GCAAGAAGCA 
GAGGCTTCTC TGAAGGCAAA CAGGAAGGTG GTGAAGGTCC CCAAAGGCAC ATCCAAGTAC 
CAAGCTGCCT GGATTGTAGA TGATGAAGAA GAGGGCAATC AGGAAGATGA TGACGATGAA 
GATGATGATG ACATCGATGA TGATATGATG GAAGAGGCAG TTTCCCAGGA GGGGGAAAGC 
AGCGAGGAGG GAGAGGAACC TGCAGAGGAG GAATGTGAGA CCATGACCGT TTCCGAGTGC 
TTGCGGGACG ACCAGTATGA TGAGAAAGTG GAGGAAGATG AAGAGATGCT GGAGAGGTAC 
AAACAGGAGA GAATGGATGA AATGTTTCCG GATGAGGTGG ACACGCCACG TGACGTACCT 
GCCAGAGTCC GGTTCCAGAA GTACAGGGGG CTGAAGAGCT TCCGAACTTC TCCATGGGAC 
CCCAAAGAGA ATCTCCCAAG GGATTATGCC AGGATTTTCC AGTTCCAGGA CTTCTCCCGG 
ACCAGAAAGA ACATCTTCCG GCAAATAGAG AAAGAGGAGA CTGAAGGAGC CTCGGTTGGC 
TGGTACGTTA CACTTCACAT CTGCAATGTC CCTGTCTCAG TGATGGAGAG CTTCAAAGAA 
GGGAAGCCCC TAGTCCTGTT CTCACTGCTT CCCCACGAAC AAAAGATGTC CGTGTTGAAT 
TTCCTGGTGC GGCGGCATCC GAGCAACAGT GAACCAGTGA AGGCAAAGGA GGAGCTGATC 
TTTCACTGTG GGTTCAGGCG GTTCCGAGCA TCCCCCCTGT TCTCCCAGCA CACCTCAGCT 
GATAAACACA AGCTGGAGCG TTTCCTGCGC CCGGACGCTG CCCTGGTGGT GACTGTTTAC 
GCTCCCATCA CTTTCCCTCC TGCCTCGGTG CTTCTTTTTA AACAGAGAAG TAACGGAATG 
CATGACCTCA TTGCCACGGG TTCTCTGCTC TCCGTGGACC CAGACAGAAT CGTCATCAAG 
CGGCTGGTGC TCAGTGGCCA CCCTTTCAAG ATCTTTACCA AGACGGCTGT CGTGCGATAC 
ATGTTCTTTA GCAGAGAGGA TGTGATGTGG TTCAAGCCAG TGGAGCTGAG AACAAAGTGG 
GGTCGTAGAG GACACATCAA GGAGCCGTTA GGGACCCACG GTCACATGAA GTGCCACTTT 
GATGGACAGC TAAAGTCCCA GGACACGGTG CTGCTGAACC TTTACAAGCG CGTTTTTCCT 
AAATGGACTT TTGATCCCCA CGTTCCAGAG CCCGTGCCGT GGGTGAGGAA CGAGAGCGCG 
CTGTCCGTGC AGGAGGTGGA AATGGAATAA