PDE6C cDNA ORF clone, Calidris pugnax(ruff)

Gene
Clones
gRNAs

Summary

Gene Symbol	PDE6C
Entrez Gene ID	106902394
Full Name	phosphodiesterase 6C
Gene Type	protein-coding
Organism	Calidris pugnax(ruff)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014965814.1	XP_014821300.1	cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'

Pathways from BioSystems
Gene Ontology

The following PDE6C gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDE6C cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa60130	XM_014965814.1 Latest version!	Calidris pugnax phosphodiesterase 6C (PDE6C), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PDE6C ( XM_014965814.1 ) cDNA ORF clone, Calidris pugnax(ruff) -> XP_014821300.1 Calidris pugnax phosphodiesterase 6C (PDE6C), mRNA.

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CloneID	OCa60130
Clone ID Related Accession (Same CDS sequence)	XM_014965814.1
Accession Version	XM_014965814.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2592bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-08
Organism	Calidris pugnax(ruff)
Product	cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015090784.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calidris pugnax Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGTGAAG TAAATAAAGA TGCTGTTGAA AAATACTTGG AGAACAACCC CCAGTTTGCA 
AAGGAGTATT TCGACCGAAA GATGAGGGCA GAAGTGCTGG GAAGTATCTT TAAAGTGAGC 
CCTGGAGATG TGAAGGAAGG AGTCAGCTTC AAAGACATGT CCCGTCTGGA GGAGTGTAAC 
ATACTTTTTG AGCTACTAAC AGAGATCCAG GATGAAGGAG GCACTATGGA GAAGATCGTG 
CACAAGGCCC TGCAGAGGCT GGCACAGCTG CTGGCGGCTG ATCGGTGTAG TATGTTTGTT 
TGTCGGTCCC GAAATGGTAT TCCAGAGGTA GCCACCAGGC TTCTGGATGT CACTCCAACT 
TCCAAGTATG AGGACAATTT GGTGAATCCA GACAATGAGG TTGTTTTCCC TCTGGACATC 
GGGATAGCAG GATGGGTTGC TCATACCAAG AAGTTTTTTA ATGTACCTGA TGTGAAAAAG 
AACAATCATT TTTCTGACTT TCTGGACAAA AAAACTGGCT ATACAACACT GAATATGTTG 
GCAACCCCAA TTATGCAGGG CAAAGAGGTG CTTGCTATCA TAATGGCACT CAACAAACTA 
AATGCCACTG AGTTCTCAAA AGAGGATGAA GAGGTCTTTA AAAAATACCT CAATTTTATA 
TCTTTGGTCC TAAGAAATCA TCATACGTCG TATCTCTACA ATATTGAATC CCGAAGAAGT 
CAGATGCTTT TGTGGTCTGC CAACAAAGTC TTTGAAGAGC TAACGGATAT AGAGCGGCAG 
TTTCACAAAG CACTGTACAC TATTCGAATT TATTTGAATT GTGAAAGATA CTCCGTTGGT 
CTGCTGGACA TGACTAAGGA GAAGGAGTTC TTTGATGAGT GGCCAATCCG GCTGGGGGAG 
GCAGAGCCTT ACAAAGGCCC CAAGACACCT GATGGACGAG AAGTCAACTT TTATAAGATT 
ATTGACTATA TTTTACATGG AAAAGAAGAA ATCAAAGTCA TTCCGTCACC TCCAGCAGAT 
CACTGGTGTC TTGTCAGTGG ATTGCCAACA TATGTTGCTG AAAATGGATT TATTTGTAAC 
ATGATGAATG CACCAGCAGA TGACTATTTC ACATTCCAGA AAGGACCAGT GGATGAGACT 
GGATGGGTTA TCAAAAATGT CCTGTCACTG CCTATTGTCA ACAAAAAAGA AGAAATTGTG 
GGAGTTGCAA CATTTTACAA TAGGAAAGAC GGAAAACCTT TTGACGAGTA TGATGAACAG 
ATCATTGAAA CTCTCACACA GTTCCTGGGG TGGTCCGTTT TAAATACTGA CACTTATGAC 
AAAATGAACA AGCTTGAAAA CAGGAAAGAC ATTGCTCAGG AAATGCTTAT GTACCAGACA 
AAGGCCACCC CTTCTGAAGT GGAATCTATA CTGAAATACA AGGAGAAATT AAATGCAACT 
AGTTTAGAAG AATGTGATCA AAAGGATCTT ATCAGGATTT TGAAAGAAGA ATTACCTGAT 
CCAAAAGATT TAGAACTGTA TGAATTCCGC TTCAGCGACT TTCCTGTTAC AGAGCACGGC 
CTGATAACTT GTGGGATACG ACTGTTCTTT GAGATAAATG TTGTTGAAAA GTTCAAAGTC 
CCAGCTGAGG TCCTTACAAG ATGGATGTAC ACAGTCCGGA AGGGTTATCG AGACATCACG 
TACCATAACT GGCGACATGG GTTCAATGTG GGACAAACCA TGTTTACTCT GCTGATGACA 
GGCAAAATAA AGAAATACTA CACGGATTTA GAAGCCTTTG CCATGGTTGC TGCTGCTTTC 
TGCCACGACA TTGACCACAG AGGGACCAAT AACTTGTATC AAATGAAGTC AGCTGCTCCC 
CTGGCAAAGC TTCACGGCTC CTCCATTTTA GAAAGGCATC ACCTGGAGTA CAGTAAAACC 
CTACTGCAAG ATGAGAGTTT AAACATCTTC CAGAACCTAA ATAAGCGCCA GTTTGAAACT 
GTTCTACACT TATTTGAAGT TGCAATAATA GCAACTGACT TGGCTTTGTA TTTCAAGAAA 
AGAACTATGT TTCAAAAGAT TGTGGATGCA ATTGAAAAAA TGGAATCAGA AGAGGAGGCA 
ATTAAATATA TATCTATTGA CCCAACCAAA AAAGAAGTCA TAATGGCTAT GATGATGACG 
GGATGTGACC TCTCTGCTAT AACCAAGCCT TGGGAAGTGC AAAGCAAGGT TGCCCTCATG 
GTTGCAAATG AGTTCTGGGA GCAAGGTGAC CTGGAACGAA CTGTGCTACA GCAACAACCA 
ATTCCTATGA TGGACAGAAA CAAAGGAGAT GAACTACCTA AGCTCCAAGT TGGTTTCATA 
GATTTTGTGT GCACATTTGT GTACAAGGAA TTCTCAAGGT TTCACAAGGA AATTACACCT 
ATGTTTGATG GTCTTCAAAA CAACAGGGTT GAATGGAAAA CAAGAGCTGA TGAGTATGAA 
GAGAAGATGA AAATTATTGA GGAACAAAAG AAAAAGGAAG AAGAAGCAGC TGCCAAAAAA 
GCTGAAAATG CAGCTGGAGG TGGTGGCGGA AGTGGAGAGG ATGGAAAATC CAAAACATGT 
ATAATTTTGT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014821300.1
CDS	222..2813
Translation	MGEVNKDAVEKYLENNPQFAKEYFDRKMRAEVLGSIFKVSPGDVKEGVSFKDMSRLEECNILFELLTEIQDEGGTMEKIVHKALQRLAQLLAADRCSMFVCRSRNGIPEVATRLLDVTPTSKYEDNLVNPDNEVVFPLDIGIAGWVAHTKKFFNVPDVKKNNHFSDFLDKKTGYTTLNMLATPIMQGKEVLAIIMALNKLNATEFSKEDEEVFKKYLNFISLVLRNHHTSYLYNIESRRSQMLLWSANKVFEELTDIERQFHKALYTIRIYLNCERYSVGLLDMTKEKEFFDEWPIRLGEAEPYKGPKTPDGREVNFYKIIDYILHGKEEIKVIPSPPADHWCLVSGLPTYVAENGFICNMMNAPADDYFTFQKGPVDETGWVIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDEYDEQIIETLTQFLGWSVLNTDTYDKMNKLENRKDIAQEMLMYQTKATPSEVESILKYKEKLNATSLEECDQKDLIRILKEELPDPKDLELYEFRFSDFPVTEHGLITCGIRLFFEINVVEKFKVPAEVLTRWMYTVRKGYRDITYHNWRHGFNVGQTMFTLLMTGKIKKYYTDLEAFAMVAAAFCHDIDHRGTNNLYQMKSAAPLAKLHGSSILERHHLEYSKTLLQDESLNIFQNLNKRQFETVLHLFEVAIIATDLALYFKKRTMFQKIVDAIEKMESEEEAIKYISIDPTKKEVIMAMMMTGCDLSAITKPWEVQSKVALMVANEFWEQGDLERTVLQQQPIPMMDRNKGDELPKLQVGFIDFVCTFVYKEFSRFHKEITPMFDGLQNNRVEWKTRADEYEEKMKIIEEQKKKEEEAAAKKAENAAGGGGGSGEDGKSKTCIIL

Target ORF information:

RefSeq Version	XM_014965814.1
Organism	Calidris pugnax(ruff)
Definition	Calidris pugnax phosphodiesterase 6C (PDE6C), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014965814.1

ORF Insert Sequence:

ATGGGTGAAG TAAATAAAGA TGCTGTTGAA AAATACTTGG AGAACAACCC CCAGTTTGCA 
AAGGAGTATT TCGACCGAAA GATGAGGGCA GAAGTGCTGG GAAGTATCTT TAAAGTGAGC 
CCTGGAGATG TGAAGGAAGG AGTCAGCTTC AAAGACATGT CCCGTCTGGA GGAGTGTAAC 
ATACTTTTTG AGCTACTAAC AGAGATCCAG GATGAAGGAG GCACTATGGA GAAGATCGTG 
CACAAGGCCC TGCAGAGGCT GGCACAGCTG CTGGCGGCTG ATCGGTGTAG TATGTTTGTT 
TGTCGGTCCC GAAATGGTAT TCCAGAGGTA GCCACCAGGC TTCTGGATGT CACTCCAACT 
TCCAAGTATG AGGACAATTT GGTGAATCCA GACAATGAGG TTGTTTTCCC TCTGGACATC 
GGGATAGCAG GATGGGTTGC TCATACCAAG AAGTTTTTTA ATGTACCTGA TGTGAAAAAG 
AACAATCATT TTTCTGACTT TCTGGACAAA AAAACTGGCT ATACAACACT GAATATGTTG 
GCAACCCCAA TTATGCAGGG CAAAGAGGTG CTTGCTATCA TAATGGCACT CAACAAACTA 
AATGCCACTG AGTTCTCAAA AGAGGATGAA GAGGTCTTTA AAAAATACCT CAATTTTATA 
TCTTTGGTCC TAAGAAATCA TCATACGTCG TATCTCTACA ATATTGAATC CCGAAGAAGT 
CAGATGCTTT TGTGGTCTGC CAACAAAGTC TTTGAAGAGC TAACGGATAT AGAGCGGCAG 
TTTCACAAAG CACTGTACAC TATTCGAATT TATTTGAATT GTGAAAGATA CTCCGTTGGT 
CTGCTGGACA TGACTAAGGA GAAGGAGTTC TTTGATGAGT GGCCAATCCG GCTGGGGGAG 
GCAGAGCCTT ACAAAGGCCC CAAGACACCT GATGGACGAG AAGTCAACTT TTATAAGATT 
ATTGACTATA TTTTACATGG AAAAGAAGAA ATCAAAGTCA TTCCGTCACC TCCAGCAGAT 
CACTGGTGTC TTGTCAGTGG ATTGCCAACA TATGTTGCTG AAAATGGATT TATTTGTAAC 
ATGATGAATG CACCAGCAGA TGACTATTTC ACATTCCAGA AAGGACCAGT GGATGAGACT 
GGATGGGTTA TCAAAAATGT CCTGTCACTG CCTATTGTCA ACAAAAAAGA AGAAATTGTG 
GGAGTTGCAA CATTTTACAA TAGGAAAGAC GGAAAACCTT TTGACGAGTA TGATGAACAG 
ATCATTGAAA CTCTCACACA GTTCCTGGGG TGGTCCGTTT TAAATACTGA CACTTATGAC 
AAAATGAACA AGCTTGAAAA CAGGAAAGAC ATTGCTCAGG AAATGCTTAT GTACCAGACA 
AAGGCCACCC CTTCTGAAGT GGAATCTATA CTGAAATACA AGGAGAAATT AAATGCAACT 
AGTTTAGAAG AATGTGATCA AAAGGATCTT ATCAGGATTT TGAAAGAAGA ATTACCTGAT 
CCAAAAGATT TAGAACTGTA TGAATTCCGC TTCAGCGACT TTCCTGTTAC AGAGCACGGC 
CTGATAACTT GTGGGATACG ACTGTTCTTT GAGATAAATG TTGTTGAAAA GTTCAAAGTC 
CCAGCTGAGG TCCTTACAAG ATGGATGTAC ACAGTCCGGA AGGGTTATCG AGACATCACG 
TACCATAACT GGCGACATGG GTTCAATGTG GGACAAACCA TGTTTACTCT GCTGATGACA 
GGCAAAATAA AGAAATACTA CACGGATTTA GAAGCCTTTG CCATGGTTGC TGCTGCTTTC 
TGCCACGACA TTGACCACAG AGGGACCAAT AACTTGTATC AAATGAAGTC AGCTGCTCCC 
CTGGCAAAGC TTCACGGCTC CTCCATTTTA GAAAGGCATC ACCTGGAGTA CAGTAAAACC 
CTACTGCAAG ATGAGAGTTT AAACATCTTC CAGAACCTAA ATAAGCGCCA GTTTGAAACT 
GTTCTACACT TATTTGAAGT TGCAATAATA GCAACTGACT TGGCTTTGTA TTTCAAGAAA 
AGAACTATGT TTCAAAAGAT TGTGGATGCA ATTGAAAAAA TGGAATCAGA AGAGGAGGCA 
ATTAAATATA TATCTATTGA CCCAACCAAA AAAGAAGTCA TAATGGCTAT GATGATGACG 
GGATGTGACC TCTCTGCTAT AACCAAGCCT TGGGAAGTGC AAAGCAAGGT TGCCCTCATG 
GTTGCAAATG AGTTCTGGGA GCAAGGTGAC CTGGAACGAA CTGTGCTACA GCAACAACCA 
ATTCCTATGA TGGACAGAAA CAAAGGAGAT GAACTACCTA AGCTCCAAGT TGGTTTCATA 
GATTTTGTGT GCACATTTGT GTACAAGGAA TTCTCAAGGT TTCACAAGGA AATTACACCT 
ATGTTTGATG GTCTTCAAAA CAACAGGGTT GAATGGAAAA CAAGAGCTGA TGAGTATGAA 
GAGAAGATGA AAATTATTGA GGAACAAAAG AAAAAGGAAG AAGAAGCAGC TGCCAAAAAA 
GCTGAAAATG CAGCTGGAGG TGGTGGCGGA AGTGGAGAGG ATGGAAAATC CAAAACATGT 
ATAATTTTGT AA