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prpf19 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol prpf19
Entrez Gene ID 321544
Full Name pre-mRNA processing factor 19
Synonyms NMP200,fb18f09,prp19,wu:fb18f09,zgc:56158
General protein information
Preferred Names

pre-mRNA processing factor 19

Names

pre-mRNA-processing factor 19
PRP19/PSO4 homolog
nuclear matrix protein NMP200 related to splicing factor PRP19
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_201467.1 NP_958875.1 pre-mRNA-processing factor 19

Pathways from BioSystems


Homologies


Gallus gallus (chicken) PRPF19 NP_001034420.1
PRPF19 XP_001084826.2
Bos taurus (cattle) PRPF19 NP_001069108.1
Xenopus tropicalis (tropical clawed frog) prpf19 NP_001005435.1
Homo sapiens (human) PRPF19 NP_055317.1
Drosophila melanogaster (fruit fly) Prp19 NP_523783.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP007217 XP_308568.4
Rattus norvegicus (Norway rat) Prpf19 NP_647549.2
Danio rerio (zebrafish) prp19 NP_958875.1
Arabidopsis thaliana (thale cress) MAC3B NP_850207.4
Pan troglodytes (chimpanzee) PRPF19 XP_001142421.1
Canis lupus familiaris (dog) PRPF19 XP_853782.1
Mus musculus (house mouse) Prpf19 NP_598890.1
Arabidopsis thaliana (thale cress) MAC3A NP_563708.1
Oryza sativa (rice) Os10g0466300 NP_001064804.1

Gene Ontology


Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Ccdc94 protects cells from ionizing radiation by inhibiting the expression of p53.
Sorrells S, Carbonneau S, Harrington E, Chen AT, Hast B, Milash B, Pyati U, Major MB, Zhou Y, Zon LI, Stewart RA, Look AT, Jette C
PLoS genetics8(8)e1002922(2012)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following prpf19 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prpf19 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa30623 NM_201467.1
Latest version!		 Danio rerio pre-mRNA processing factor 19 (prpf19), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa30623
Clone ID Related Accession (Same CDS sequence) NM_201467.1
Accession Version NM_201467.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1518bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-01-26
Organism Danio rerio(zebrafish)
Product pre-mRNA-processing factor 19
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045954.1. ##Evidence-Data-START## Transcript exon combination :: BC045954.1, BC165225.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCTTTGG TTTGTGCTAT TTCAAACGAA GTGCCGGAGC ACCCCTGTGT GTCCCCTGTT 
TCCAACCAAG TGTTTGAGAG GCGTCTGATT GAGAAATACA TAGCGGAGAA TGGAGCTGAC 
CCCATCAATG GACAGCCCCT GTCTGAGGAG CAGCTCATTG ATATCAAGGT GTCTCATCCC 
ATTCGACCGA AGGCTCCCTC TGCCACAAGT ATTCCTGCTA TCCTCAAGTC TCTACAGGAT 
GAGTGGGACG CCGTGATGCT GCACAGTTTT ACATTGAGGC AGCAGTTGCA GACAACACGA 
CAAGAGCTTT CTCATGCTCT CTACCAGCAC GATGCAGCCT GCAGAGTCAT TGCTCGTCTT 
ACAAAAGAGG TCACTGCTGC CAGAGAAGCT TTGGCTACCC TCAAACCCCA GGCTGGATTG 
GTCGCTCCAC AGGCCGCTCC TGCTTCTCAG CCCGCTGCTG TGGGTGCTGG TGGTGAGGCC 
ATGGAGGTCA GTGAACAGGT TGGAATGACT CCGGAGATCA TACAGAAGCT TCAAGACAAG 
GCCACTGTTC TGACCACCGA GAGAAAGAAG AGAGGAAAGA CCGTGCCAGA AGAGCTGGTC 
AGAGCAGAAG ATCTCAGCAA GTATCGCCAA GTGGGATCCC ATGCTGGTCT TCACAGTGCC 
AGTGTACCAG GAATCCTCTC TCTGGATCTC TGCCCAACAG ACACCAACAA AGTCCTCACC 
GGTGGTGCGG ATAAGAACGT GGTGGTGTTT GACCGTCGTG AGGAGCAGAT TGTTGCCACC 
CTCAAAGGAC ACACCAAAAA GGTCTCATCT GTCATCTACC ACCCTGCTCA GGCGGTGGTG 
TTCTCAGCGT CTTCAGACAG CACTATTAGA GTGTGGTCCG TTACTGGAGG CAACTGTGTG 
CAAGTGGTCA GGGCCCATGA GTCTGCTGTT ACTGGCCTCT CTCTGCACGC TACTGGGGAC 
TATTTACTGA GCTCATCTGA GGACCAGTAC TGGGCCTTCT CCGATATCCA AACTGGACGT 
GTCCTGACCA AAGTTACTGA TGAGACTGCT GGATGTGCTT TAACCTGTGC ACAGTTCCAT 
CCTGATGGTC TGATTTTCGG CACTGGTACG GGCGATTCTC AGATTAAGAT CTGGGATCTG 
AAGGAACGAA CCAATGTAGC CAACTTCCCT GGACATTCAG GTCCAGTCAC GGCCATTGCT 
TTCTCTGAGA ATGGATACTA TCTAGCCACT GGTGCTCAGG ACAGTTCACT GAAGCTGTGG 
GATCTGAGGA AGCTGAAGAA CTTCAAGACA ATCACTCTGG ACAACAATTA CGAGGTCAAG 
TCCCTGGTGT TTGATCAGAG TGGAACATAT CTAGCTGTGG GAGGGTCAGA CATCAGAGTT 
TATATCTGCA AACAGTGGTC CGAGGTCCTC AACTTCTCCG ATCATTCTGG TCTGGTGACT 
GGTGTGGCTT TTGGTGAACA TGCTCAGTTC CTGGCTTCCA CAGGCATGGA CAGAAGTCTC 
AAGTTCTACA GCCTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_958875.1
CDS119..1636
Translation

Target ORF information:

RefSeq Version NM_201467.1
Organism Danio rerio(zebrafish)
Definition Danio rerio pre-mRNA processing factor 19 (prpf19), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_201467.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
ATGTCTTTGG TTTGTGCTAT TTCAAACGAA GTGCCGGAGC ACCCCTGTGT GTCCCCTGTT 
TCCAACCAAG TGTTTGAGAG GCGTCTGATT GAGAAATACA TAGCGGAGAA TGGAGCTGAC 
CCCATCAATG GACAGCCCCT GTCTGAGGAG CAGCTCATTG ATATCAAGGT GTCTCATCCC 
ATTCGACCGA AGGCTCCCTC TGCCACAAGT ATTCCTGCTA TCCTCAAGTC TCTACAGGAT 
GAGTGGGACG CCGTGATGCT GCACAGTTTT ACATTGAGGC AGCAGTTGCA GACAACACGA 
CAAGAGCTTT CTCATGCTCT CTACCAGCAC GATGCAGCCT GCAGAGTCAT TGCTCGTCTT 
ACAAAAGAGG TCACTGCTGC CAGAGAAGCT TTGGCTACCC TCAAACCCCA GGCTGGATTG 
GTCGCTCCAC AGGCCGCTCC TGCTTCTCAG CCCGCTGCTG TGGGTGCTGG TGGTGAGGCC 
ATGGAGGTCA GTGAACAGGT TGGAATGACT CCGGAGATCA TACAGAAGCT TCAAGACAAG 
GCCACTGTTC TGACCACCGA GAGAAAGAAG AGAGGAAAGA CCGTGCCAGA AGAGCTGGTC 
AGAGCAGAAG ATCTCAGCAA GTATCGCCAA GTGGGATCCC ATGCTGGTCT TCACAGTGCC 
AGTGTACCAG GAATCCTCTC TCTGGATCTC TGCCCAACAG ACACCAACAA AGTCCTCACC 
GGTGGTGCGG ATAAGAACGT GGTGGTGTTT GACCGTCGTG AGGAGCAGAT TGTTGCCACC 
CTCAAAGGAC ACACCAAAAA GGTCTCATCT GTCATCTACC ACCCTGCTCA GGCGGTGGTG 
TTCTCAGCGT CTTCAGACAG CACTATTAGA GTGTGGTCCG TTACTGGAGG CAACTGTGTG 
CAAGTGGTCA GGGCCCATGA GTCTGCTGTT ACTGGCCTCT CTCTGCACGC TACTGGGGAC 
TATTTACTGA GCTCATCTGA GGACCAGTAC TGGGCCTTCT CCGATATCCA AACTGGACGT 
GTCCTGACCA AAGTTACTGA TGAGACTGCT GGATGTGCTT TAACCTGTGC ACAGTTCCAT 
CCTGATGGTC TGATTTTCGG CACTGGTACG GGCGATTCTC AGATTAAGAT CTGGGATCTG 
AAGGAACGAA CCAATGTAGC CAACTTCCCT GGACATTCAG GTCCAGTCAC GGCCATTGCT 
TTCTCTGAGA ATGGATACTA TCTAGCCACT GGTGCTCAGG ACAGTTCACT GAAGCTGTGG 
GATCTGAGGA AGCTGAAGAA CTTCAAGACA ATCACTCTGG ACAACAATTA CGAGGTCAAG 
TCCCTGGTGT TTGATCAGAG TGGAACATAT CTAGCTGTGG GAGGGTCAGA CATCAGAGTT 
TATATCTGCA AACAGTGGTC CGAGGTCCTC AACTTCTCCG ATCATTCTGG TCTGGTGACT 
GGTGTGGCTT TTGGTGAACA TGCTCAGTTC CTGGCTTCCA CAGGCATGGA CAGAAGTCTC 
AAGTTCTACA GCCTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG


book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


book

Ccdc94 protects cells from ionizing radiation by inhibiting the expression of p53.
PLoS genetics8(8)e1002922(2012)
Sorrells S,Carbonneau S,Harrington E,Chen AT,Hast B,Milash B,Pyati U,Major MB,Zhou Y,Zon LI,Stewart RA,Look AT,Jette C