Gene Symbol | srp54 |
Entrez Gene ID | 393963 |
Full Name | signal recognition particle 54 |
Synonyms | Srp54k,zgc:55842,zgc:85713 |
General protein information |
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Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » srp54 cDNA ORF clone
gRNAs
Gene Symbol | srp54 |
Entrez Gene ID | 393963 |
Full Name | signal recognition particle 54 |
Synonyms | Srp54k,zgc:55842,zgc:85713 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_200988.2 | NP_957282.1 | signal recognition particle 54 kDa protein |
Mus musculus (house mouse) | Srp54a | NP_036029.2 |
Danio rerio (zebrafish) | srp54 | NP_957282.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004610 | XP_315212.2 |
Caenorhabditis elegans (roundworm) | F21D5.7 | NP_501507.1 |
Saccharomyces cerevisiae (baker's yeast) | SRP54 | NP_015413.1 |
Kluyveromyces lactis | KLLA0D09020g | XP_453464.1 |
Homo sapiens (human) | SRP54 | NP_003127.1 |
Rattus norvegicus (Norway rat) | Srp54a | NP_446323.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05977 | XP_003711822.1 |
Arabidopsis thaliana (thale cress) | AT1G48900 | NP_564535.1 |
Canis lupus familiaris (dog) | SRP54 | NP_001003272.1 |
Bos taurus (cattle) | SRP54 | NP_001033290.1 |
Gallus gallus (chicken) | SRP54 | XP_421238.1 |
Schizosaccharomyces pombe (fission yeast) | srp54 | NP_588209.1 |
Neurospora crassa | NCU09696 | XP_960643.1 |
Oryza sativa (rice) | Os01g0772800 | NP_001044395.1 |
Pan troglodytes (chimpanzee) | SRP54 | XP_001136048.1 |
SRP54 | XP_001082531.1 | |
Mus musculus (house mouse) | Srp54b | NP_001093579.1 |
Drosophila melanogaster (fruit fly) | Srp54k | NP_523931.1 |
Eremothecium gossypii | AGOS_AAR041W | NP_982582.2 |
Xenopus tropicalis (tropical clawed frog) | srp54 | NP_988977.1 |
Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond-like features.
Carapito R, Konantz M, Paillard C, Miao Z, Pichot A, Leduc MS, Yang Y, Bergstrom KL, Mahoney DH, Shardy DL, Alsaleh G, Naegely L, Kolmer A, Paul N, Hanauer A, Rolli V, M?ller JS, Alghisi E, Sauteur L, Macquin C, Morlon A, Sancho CS, Amati-Bonneau P, Procaccio V, Mosca-Boidron AL, Marle N, Osmani N, Lefebvre O, Goetz JG, Unal S, Akarsu NA, Radosavljevic M, Chenard MP, Rialland F, Grain A, B?n? MC, Eveillard M, Vincent M, Guy J, Faivre L, Thauvin-Robinet C, Thevenon J, Myers K, Fleming MD, Shimamura A, Bottollier-Lemallaz E, Westhof E, Lengerke C, Isidor B, Bahram S
The Journal of clinical investigation127(11)4090-4103(2017 Nov)
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Novel zebrafish caspase-3 substrates.
Valencia CA, Bailey C, Liu R
Biochemical and biophysical research communications361(2)311-6(2007 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following srp54 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the srp54 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa22258 | |
Clone ID Related Accession (Same CDS sequence) | NM_200988.2 | |
Accession Version | NM_200988.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1515bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | signal recognition particle 54 kDa protein | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH550891.1, BX088587.6 and EH461167.1. On or before Feb 27, 2016 this sequence version replaced XM_005158616.2, NM_200988.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01001085.1, GFIL01039678.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTTTTAG CTGATCTGGG GAGGAAAATA ACCTCAGCTT TGAGGTCTCT CAGCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_957282.1 |
CDS | 195..1709 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGTTTTAG CTGATCTGGG GAGGAAAATA ACCTCAGCTT TGAGGTCTCT CAGCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond-like features. |
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Novel zebrafish caspase-3 substrates. |