Gene Symbol | trim8b |
Entrez Gene ID | 559967 |
Full Name | tripartite motif containing 8b |
Synonyms | si:ch211-208d15.5,trim8,wu:fc90g07 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » trim8b cDNA ORF clone
gRNAs
Gene Symbol | trim8b |
Entrez Gene ID | 559967 |
Full Name | tripartite motif containing 8b |
Synonyms | si:ch211-208d15.5,trim8,wu:fc90g07 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001142375.1 | NP_001135847.1 | tripartite motif containing 8b |
NM_001044914.1 | NP_001038379.1 | tripartite motif containing 8b |
Danio rerio (zebrafish) | trim8a | NP_001265783.1 |
Mus musculus (house mouse) | Trim8 | NP_444330.2 |
Rattus norvegicus (Norway rat) | Trim8 | NP_001121555.1 |
TRIM8 | XP_001113109.1 | |
Bos taurus (cattle) | TRIM8 | NP_001178405.1 |
Gallus gallus (chicken) | TRIM8 | NP_001026404.1 |
Xenopus tropicalis (tropical clawed frog) | trim8 | NP_001027512.1 |
Pan troglodytes (chimpanzee) | TRIM8 | XP_003951785.1 |
Canis lupus familiaris (dog) | TRIM8 | XP_543993.3 |
Danio rerio (zebrafish) | trim8 | NP_001038379.1 |
Homo sapiens (human) | TRIM8 | NP_112174.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
A fish-specific transposable element shapes the repertoire of p53 target genes in zebrafish.
Micale L, Loviglio MN, Manzoni M, Fusco C, Augello B, Migliavacca E, Cotugno G, Monti E, Borsani G, Reymond A, Merla G
PloS one7(10)e46642(2012)
Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish.
Boudinot P, van der Aa LM, Jouneau L, Du Pasquier L, Pontarotti P, Briolat V, Benmansour A, Levraud JP
PloS one6(7)e22022(2011)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following trim8b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the trim8b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa01706 | |
Clone ID Related Accession (Same CDS sequence) | NM_001044914.1 | |
Accession Version | NM_001044914.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1695bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | tripartite motif containing 8b | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL928692.9. On or before Sep 1, 2006 this sequence version replaced XM_702081.1, XM_678636.1. ##Evidence-Data-START## Transcript exon combination :: DY552556.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCAGAGA ACTGGAAGAA CTGTCTGGAG GAAGAGCTCA TATGCCCAAT TTGTCTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001038379.1 |
CDS | 1117..2811 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCAGAGA ACTGGAAGAA CTGTCTGGAG GAAGAGCTCA TATGCCCAAT TTGTCTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa04495 | |
Clone ID Related Accession (Same CDS sequence) | NM_001142375.1 | |
Accession Version | NM_001142375.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1695bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | tripartite motif containing 8b | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC171664.1. On Dec 3, 2008 this sequence version replaced XM_001334115.2. ##Evidence-Data-START## Transcript exon combination :: BC171664.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCAGAGA ATTGGAAGAA CTGTCTGGAG GAAGAGCTCA TATGCCCAAT TTGTCTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001135847.1 |
CDS | 1111..2805 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCAGAGA ATTGGAAGAA CTGTCTGGAG GAAGAGCTCA TATGCCCAAT TTGTCTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
A fish-specific transposable element shapes the repertoire of p53 target genes in zebrafish. |
Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish. |