si:dkey-119m7.4 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	si:dkey-119m7.4
Entrez Gene ID	560629
Full Name	si:dkey-119m7.4
Synonyms	im:7138239
General protein information	Preferred Names si:dkey-119m7.4 Names uncharacterized protein LOC560629
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001044934.1	NP_001038399.1	uncharacterized protein LOC560629

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	Orct	NP_524479.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004309	XP_313581.5
Caenorhabditis elegans (roundworm)	F45E10.2	NP_001022173.1
Danio rerio (zebrafish)	si:dkey-166k12.1	XP_001341287.1
Danio rerio (zebrafish)	si:dkey-119m7.4	NP_001038399.1
Drosophila melanogaster (fruit fly)	Orct2	NP_651238.2
Caenorhabditis elegans (roundworm)	Y82E9BR.16	NP_001022960.1
Arabidopsis thaliana (thale cress)	4-Oct	NP_188702.2
Oryza sativa (rice)	Os04g0631100	NP_001053980.2

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis.
Lo J, Lee S, Xu M, Liu F, Ruan H, Eun A, He Y, Ma W, Wang W, Wen Z, Peng J
Genome research13(3)455-66(2003 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following si:dkey-119m7.4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the si:dkey-119m7.4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32063	NM_001044934.1 Latest version!	Danio rerio si:dkey-119m7.4 (si:dkey-119m7.4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

si:dkey-119m7.4 ( NM_001044934.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001038399.1 Danio rerio si:dkey-119m7.4 (si:dkey-119m7.4), mRNA.

Price & Availability↑

CloneID	ODa32063
Clone ID Related Accession (Same CDS sequence)	NM_001044934.1
Accession Version	NM_001044934.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC560629
Comment	Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AL954744.8. On or before Sep 1, 2006 this sequence version replaced XM_680453.1, XM_702921.1. ##Evidence-Data-START## Transcript exon combination :: BC171347.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGAACTTTG ACAAGGTCCT GGACCGGATT GGTGGGTTTG GACGTTTTCA GAAGACTCTT 
TATGTTTGGA TCTGTCTGCC ACAGATCTTT TTGGCCTTCC ACATGTTGGT GTCTGTCTTC 
ACTGGGGCCG TGCCCCCTCA CCTGTGCAGA TCTTCTTGGC CAGTGGGGGA CAGTGCCGGT 
CCCAGGCTGA ACCTGAGCTT CAGCAGTGCT CCAGGGGAGT CCTGCACACC TTCTCAGGAC 
GGCTCTCTGC CCCAGCGTAA CCACAGTCTG CCGATTACCG AGCACTCGTC CACCGCGAAG 
GGCTGCACCG GAGGATGGGA GTTCAGCAAG GAGGTCTTCC TCAGCACTAT CGCCACAGAG 
TGGGATCTCG TGTGTGAAAA CGCCACTATG AACAACATTG GCTCTTCTAT CTATATGTTT 
GGGCTGCTGG TTGGAGCGGT GCTGTTCGGA GCCCTTGCTG ATAAGTATGG CCGCAGAATA 
ATCATACTGA TCGGTTTAGC AATACAGGCC ATCTTCGGAG TGGGCGCCGC TTTTGCCCCA 
AATTTCTACA TTTACGTCCT GCTACGCTTC GTGGTGGGCA CGACTGTGTC GGCAGTGATC 
ATGAATGCAT TTGTGCTGGG CACTGAGTGG ACGGGTCCTA AAAAGCGCAT GTTGGCAGGT 
GTCATCACAG ATTACTTTTT TGGGTTCGGC TATATCCTGC TTGCAGGGGT GGCCTACCTC 
ATCCGAGACT GGCGTAAACT TCAGTTGGCC ATTTCTGCCC CCAGCTTCCT CTTCCTGTTC 
TATGTCTGGG TGCTTCCCAA GTCTGCCCGC TGGTTAATGG CCAATAACAA GCATGAGGAG 
GCATTGGATC TGATTCGCAA GGCAGCGCTT ATTAATGGCA AGCCTCTGGA GGACGATGAC 
ATGGAGCTCT ATCAGAGTCC TAAAAGCTCA GAAAAACTTC AGGAGCAGAG GAAGTACACA 
GTCTTGGATC TGGTCCGAAC GCCTAGAATG AGGAAACAGT CCCTCATCCT CTTCTACCTG 
TGGTTTGTGA ACGTCCTGGT CTATTATGGG CTGTCGCTCA ACATTTCAGA CTTTGGTATG 
AATATCTACC TGACGCAGAT GATCTTTGGC TTGGTGGAGA TGCCGGCACG CACCATTACT 
CTCTTCACTC TGAACCGCTC ACGCAGGATA TCCCAGCTAG CATTCCTGGC GGTTGGCGGC 
CTGGCCTGCC TGCTTACCAT ATTCATTCCA GATGGTAGGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001038399.1
CDS	1..1242
Translation	MNFDKVLDRIGGFGRFQKTLYVWICLPQIFLAFHMLVSVFTGAVPPHLCRSSWPVGDSAGPRLNLSFSSAPGESCTPSQDGSLPQRNHSLPITEHSSTAKGCTGGWEFSKEVFLSTIATEWDLVCENATMNNIGSSIYMFGLLVGAVLFGALADKYGRRIIILIGLAIQAIFGVGAAFAPNFYIYVLLRFVVGTTVSAVIMNAFVLGTEWTGPKKRMLAGVITDYFFGFGYILLAGVAYLIRDWRKLQLAISAPSFLFLFYVWVLPKSARWLMANNKHEEALDLIRKAALINGKPLEDDDMELYQSPKSSEKLQEQRKYTVLDLVRTPRMRKQSLILFYLWFVNVLVYYGLSLNISDFGMNIYLTQMIFGLVEMPARTITLFTLNRSRRISQLAFLAVGGLACLLTIFIPDGR

Target ORF information:

RefSeq Version	NM_001044934.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio si:dkey-119m7.4 (si:dkey-119m7.4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001044934.1

ORF Insert Sequence:

ATGAACTTTG ACAAGGTCCT GGACCGGATT GGTGGGTTTG GACGTTTTCA GAAGACTCTT 
TATGTTTGGA TCTGTCTGCC ACAGATCTTT TTGGCCTTCC ACATGTTGGT GTCTGTCTTC 
ACTGGGGCCG TGCCCCCTCA CCTGTGCAGA TCTTCTTGGC CAGTGGGGGA CAGTGCCGGT 
CCCAGGCTGA ACCTGAGCTT CAGCAGTGCT CCAGGGGAGT CCTGCACACC TTCTCAGGAC 
GGCTCTCTGC CCCAGCGTAA CCACAGTCTG CCGATTACCG AGCACTCGTC CACCGCGAAG 
GGCTGCACCG GAGGATGGGA GTTCAGCAAG GAGGTCTTCC TCAGCACTAT CGCCACAGAG 
TGGGATCTCG TGTGTGAAAA CGCCACTATG AACAACATTG GCTCTTCTAT CTATATGTTT 
GGGCTGCTGG TTGGAGCGGT GCTGTTCGGA GCCCTTGCTG ATAAGTATGG CCGCAGAATA 
ATCATACTGA TCGGTTTAGC AATACAGGCC ATCTTCGGAG TGGGCGCCGC TTTTGCCCCA 
AATTTCTACA TTTACGTCCT GCTACGCTTC GTGGTGGGCA CGACTGTGTC GGCAGTGATC 
ATGAATGCAT TTGTGCTGGG CACTGAGTGG ACGGGTCCTA AAAAGCGCAT GTTGGCAGGT 
GTCATCACAG ATTACTTTTT TGGGTTCGGC TATATCCTGC TTGCAGGGGT GGCCTACCTC 
ATCCGAGACT GGCGTAAACT TCAGTTGGCC ATTTCTGCCC CCAGCTTCCT CTTCCTGTTC 
TATGTCTGGG TGCTTCCCAA GTCTGCCCGC TGGTTAATGG CCAATAACAA GCATGAGGAG 
GCATTGGATC TGATTCGCAA GGCAGCGCTT ATTAATGGCA AGCCTCTGGA GGACGATGAC 
ATGGAGCTCT ATCAGAGTCC TAAAAGCTCA GAAAAACTTC AGGAGCAGAG GAAGTACACA 
GTCTTGGATC TGGTCCGAAC GCCTAGAATG AGGAAACAGT CCCTCATCCT CTTCTACCTG 
TGGTTTGTGA ACGTCCTGGT CTATTATGGG CTGTCGCTCA ACATTTCAGA CTTTGGTATG 
AATATCTACC TGACGCAGAT GATCTTTGGC TTGGTGGAGA TGCCGGCACG CACCATTACT 
CTCTTCACTC TGAACCGCTC ACGCAGGATA TCCCAGCTAG CATTCCTGGC GGTTGGCGGC 
CTGGCCTGCC TGCTTACCAT ATTCATTCCA GATGGTAGGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis.
Genome research13(3)455-66(2003 Mar)
Lo J,Lee S,Xu M,Liu F,Ruan H,Eun A,He Y,Ma W,Wang W,Wen Z,Peng J