Gene Symbol | PSPH |
Entrez Gene ID | 606663 |
Full Name | phosphoserine phosphatase |
Synonyms | zgc:112414 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » PSPH cDNA ORF clone
Gene Symbol | PSPH |
Entrez Gene ID | 606663 |
Full Name | phosphoserine phosphatase |
Synonyms | zgc:112414 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001033099.1 | NP_001028271.1 | phosphoserine phosphatase |
XM_005169643.3 | XP_005169700.1 | phosphoserine phosphatase isoform X1 |
Mus musculus (house mouse) | Psph | NP_598661.1 |
Gallus gallus (chicken) | PSPH | NP_001239201.1 |
Danio rerio (zebrafish) | psph | NP_001028271.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP012247 | XP_320295.4 |
Xenopus tropicalis (tropical clawed frog) | psph | NP_001016993.2 |
Homo sapiens (human) | PSPH | NP_004568.2 |
Drosophila melanogaster (fruit fly) | aay | NP_524001.2 |
Arabidopsis thaliana (thale cress) | PSP | NP_973858.1 |
Pan troglodytes (chimpanzee) | PSPH | XP_001161062.1 |
Canis lupus familiaris (dog) | PSPH | XP_005620967.1 |
Rattus norvegicus (Norway rat) | Psph | NP_001009679.1 |
Caenorhabditis elegans (roundworm) | Y62E10A.13 | NP_502581.2 |
Oryza sativa (rice) | Os12g0502400 | NP_001066829.1 |
LOC715687 | XP_001106019.1 | |
Bos taurus (cattle) | PSPH | NP_001039820.1 |
Oryza sativa (rice) | Os11g0629500 | NP_001068315.1 |
Tris(1,3-dichloro-2-propyl) phosphate disrupts dorsoventral patterning in zebrafish embryos.
Dasgupta S, Vliet SM, Kupsco A, Leet JK, Altomare D, Volz DC
PeerJ5e4156(2017)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Gene expression analysis of zebrafish melanocytes, iridophores, and retinal pigmented epithelium reveals indicators of biological function and developmental origin.
Higdon CW, Mitra RD, Johnson SL
PloS one8(7)e67801(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PSPH gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PSPH cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa05244 | |
Clone ID Related Accession (Same CDS sequence) | NM_001033099.1 | |
Accession Version | NM_001033099.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | phosphoserine phosphatase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC100056.1. ##Evidence-Data-START## Transcript exon combination :: BC100056.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505386 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTGACCG AGGCTCAGAC CCGGGATCTG CTGCGGCGGG CGGACGCGGT GTGCTTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001028271.1 |
CDS | 52..732 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001033099.1 |
1 | ATGCTGACCG AGGCTCAGAC CCGGGATCTG CTGCGGCGGG CGGACGCGGT GTGCTTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa20032 | |
Clone ID Related Accession (Same CDS sequence) | XM_005169643.3 | |
Accession Version | XM_005169643.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | phosphoserine phosphatase isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005169643.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGACCG AGGCTCAGAC CCGGGATCTG CTGCGGCGGG CGGACGCGGT GTGCTTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005169700.1 |
CDS | 1327..2007 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005169643.3 |
1 | ATGCTGACCG AGGCTCAGAC CCGGGATCTG CTGCGGCGGG CGGACGCGGT GTGCTTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Tris(1,3-dichloro-2-propyl) phosphate disrupts dorsoventral patterning in zebrafish embryos. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Gene expression analysis of zebrafish melanocytes, iridophores, and retinal pigmented epithelium reveals indicators of biological function and developmental origin. |