jagn cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	jagn
Entrez Gene ID	40714
Full Name	jagunal
Synonyms	CG10978,Dmel\CG10978
General protein information	Preferred Names jagunal Names CG10978 gene product from transcript CG10978-RB CG10978-PA CG10978-PB jagn-PA jagn-PB
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 83C3-83C3

mRNA and Protein(s)

mRNA	Protein	Name
NM_169103.2	NP_731002.1	jagunal, isoform B
NM_141328.3	NP_649585.1	jagunal, isoform A

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	jagn	NP_731002.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003240	XP_312949.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

We propose that ER reorganization is an important mechanism used by cells to prepare for an increased demand for membrane traffic, and Jagunal facilitates this process through ER clustering.
Title: Jagunal is required for reorganizing the endoplasmic reticulum during Drosophila oogenesis.

The following jagn gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the jagn cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa03999	NM_141328.3 Latest version!	Drosophila melanogaster jagunal (jagn), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa03999	NM_169103.2 Latest version!	Drosophila melanogaster jagunal (jagn), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

jagn ( NM_169103.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_731002.1 Drosophila melanogaster jagunal (jagn), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa03999
Clone ID Related Accession (Same CDS sequence)	NM_169103.2 , NM_141328.3
Accession Version	NM_169103.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	jagunal, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_169103.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCAACGC GCGGCGGACC AATGGTCGCG GGCACCGATG GCAACGACTT CGAGTTCAGG 
CAGCGCGTAG CTGGCACATA TCAAATTAGC CTGCTGAACA AGTCCAGGTT GAAGTACTGC 
ATCTTCTTTC ACGCCCTGCT GTTCTTCGTG ATGCTGGCCA AGCTGACGTC GGACATTCTG 
GACCACCTGG ATATCTTTGT GCTGGAGATC GAGGAGCTGG AGGTCCCACC GCCCCTGTGG 
TGGGAGTACG TGTGGGCCGC GTCGTTGCTC ACCTCCTTCC TGGGCCTTTC GGCCGCCAGG 
GGCAACAAGG TGCGCGAAAT GCAGAAGTAT ATGGTGGCCA TACTGCTATT CGCCATCCTG 
CCACTCTTCT ACTGCTTCGC CTACTACTTC TCGGACGTGT GGGAGTTCGC CACGCTGGAC 
AAGTCGGTGG AGCTGGACGA GACAGACATC TTTGTGTGGC GCGGTTATCC GTACGGCGTC 
TTCTGGTATG CCTTCTGCTT TGTGGGCTTC CAGGTGCACG GATTTACGCT GTACTTCGCC 
TACAACCTGG TCAAGGCCTG GAAGGCCAGA ACTGCCACGC GCAAGTTCCA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_731002.1
CDS	114..707
Translation	MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDILDHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYFAYNLVKAWKARTATRKFQ

Target ORF information:

RefSeq Version	NM_169103.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster jagunal (jagn), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_169103.2

ORF Insert Sequence:

ATGGCAACGC GCGGCGGACC AATGGTCGCG GGCACCGATG GCAACGACTT CGAGTTCAGG 
CAGCGCGTAG CTGGCACATA TCAAATTAGC CTGCTGAACA AGTCCAGGTT GAAGTACTGC 
ATCTTCTTTC ACGCCCTGCT GTTCTTCGTG ATGCTGGCCA AGCTGACGTC GGACATTCTG 
GACCACCTGG ATATCTTTGT GCTGGAGATC GAGGAGCTGG AGGTCCCACC GCCCCTGTGG 
TGGGAGTACG TGTGGGCCGC GTCGTTGCTC ACCTCCTTCC TGGGCCTTTC GGCCGCCAGG 
GGCAACAAGG TGCGCGAAAT GCAGAAGTAT ATGGTGGCCA TACTGCTATT CGCCATCCTG 
CCACTCTTCT ACTGCTTCGC CTACTACTTC TCGGACGTGT GGGAGTTCGC CACGCTGGAC 
AAGTCGGTGG AGCTGGACGA GACAGACATC TTTGTGTGGC GCGGTTATCC GTACGGCGTC 
TTCTGGTATG CCTTCTGCTT TGTGGGCTTC CAGGTGCACG GATTTACGCT GTACTTCGCC 
TACAACCTGG TCAAGGCCTG GAAGGCCAGA ACTGCCACGC GCAAGTTCCA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

jagn ( NM_141328.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649585.1 Drosophila melanogaster jagunal (jagn), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa03999
Clone ID Related Accession (Same CDS sequence)	NM_169103.2 , NM_141328.3
Accession Version	NM_141328.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	jagunal, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_141328.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCAACGC GCGGCGGACC AATGGTCGCG GGCACCGATG GCAACGACTT CGAGTTCAGG 
CAGCGCGTAG CTGGCACATA TCAAATTAGC CTGCTGAACA AGTCCAGGTT GAAGTACTGC 
ATCTTCTTTC ACGCCCTGCT GTTCTTCGTG ATGCTGGCCA AGCTGACGTC GGACATTCTG 
GACCACCTGG ATATCTTTGT GCTGGAGATC GAGGAGCTGG AGGTCCCACC GCCCCTGTGG 
TGGGAGTACG TGTGGGCCGC GTCGTTGCTC ACCTCCTTCC TGGGCCTTTC GGCCGCCAGG 
GGCAACAAGG TGCGCGAAAT GCAGAAGTAT ATGGTGGCCA TACTGCTATT CGCCATCCTG 
CCACTCTTCT ACTGCTTCGC CTACTACTTC TCGGACGTGT GGGAGTTCGC CACGCTGGAC 
AAGTCGGTGG AGCTGGACGA GACAGACATC TTTGTGTGGC GCGGTTATCC GTACGGCGTC 
TTCTGGTATG CCTTCTGCTT TGTGGGCTTC CAGGTGCACG GATTTACGCT GTACTTCGCC 
TACAACCTGG TCAAGGCCTG GAAGGCCAGA ACTGCCACGC GCAAGTTCCA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649585.1
CDS	114..707
Translation	MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDILDHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYFAYNLVKAWKARTATRKFQ

Target ORF information:

RefSeq Version	NM_141328.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster jagunal (jagn), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141328.3

ORF Insert Sequence:

ATGGCAACGC GCGGCGGACC AATGGTCGCG GGCACCGATG GCAACGACTT CGAGTTCAGG 
CAGCGCGTAG CTGGCACATA TCAAATTAGC CTGCTGAACA AGTCCAGGTT GAAGTACTGC 
ATCTTCTTTC ACGCCCTGCT GTTCTTCGTG ATGCTGGCCA AGCTGACGTC GGACATTCTG 
GACCACCTGG ATATCTTTGT GCTGGAGATC GAGGAGCTGG AGGTCCCACC GCCCCTGTGG 
TGGGAGTACG TGTGGGCCGC GTCGTTGCTC ACCTCCTTCC TGGGCCTTTC GGCCGCCAGG 
GGCAACAAGG TGCGCGAAAT GCAGAAGTAT ATGGTGGCCA TACTGCTATT CGCCATCCTG 
CCACTCTTCT ACTGCTTCGC CTACTACTTC TCGGACGTGT GGGAGTTCGC CACGCTGGAC 
AAGTCGGTGG AGCTGGACGA GACAGACATC TTTGTGTGGC GCGGTTATCC GTACGGCGTC 
TTCTGGTATG CCTTCTGCTT TGTGGGCTTC CAGGTGCACG GATTTACGCT GTACTTCGCC 
TACAACCTGG TCAAGGCCTG GAAGGCCAGA ACTGCCACGC GCAAGTTCCA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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jagn cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

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Target ORF information:

ORF Insert Sequence:

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