Ir60d cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ir60d
Entrez Gene ID	7354402
Full Name	Ionotropic receptor 60d
Synonyms	CG13582,CG42291,DmelIR60d,Dmel\CG42291,Dmel_CG13582,IR60d
General protein information	Preferred Names Ionotropic receptor 60d Names CG42291 gene product from transcript CG42291-RB CG42291-PB Ir60d-PB ionotropic receptor 60d
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 60D3-60D3

mRNA and Protein(s)

mRNA	Protein	Name
NM_001144285.2	NP_001137757.2	ionotropic receptor 60d

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ir60d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ir60d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa12683	NM_001144285.2 Latest version!	Drosophila melanogaster ionotropic receptor 60d (Ir60d), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ir60d ( NM_001144285.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001137757.2 Drosophila melanogaster ionotropic receptor 60d (Ir60d), partial mRNA.

Price & Availability↑

CloneID	OFa12683
Clone ID Related Accession (Same CDS sequence)	NM_001144285.2
Accession Version	NM_001144285.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ionotropic receptor 60d
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Dec 17, 2009 this sequence version replaced NM_001144285.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

ATGCGGCTTG CCATATACGT TGCGTTTCTT AGTTCGATTG GCAATCGGAG TGGCTTCTTG 
AGCAGCTTGC TGATGTCCCT TGGGAAGGAG CTACATTACA AAACCATTCT GCTCGTAGGA 
GGTTCCTCTA CGTGCTGGAG CCTGGAGCCC TTTGAAACGG GTGTTCCCAT CTTAAACTTG 
AGAGGGGAGA ACAACGCGTA TCCACAGGAT ACTTTCAACT CACAGATGCT TGCACTTGCC 
TGCTTGCAAA CCGAAAGCGA AGATGCAGTG AAGTTGCTTT ATAGAAGTCT TAAGGATATG 
CGAGATACTC CCACCTTACT ATTCGCATCC TCGGAGGAGC ATATACACGA TACACTATTC 
CTGGGATGTT TCAGAGAAAA CATGCTAAAT GTCCTGGCAC TTACGGCTTC TAGTAAAGAG 
TTCATCTACA GCTACCAGGC ATTCCCAACA TTCCGCGTTA TAAAACGAAA GCTGGTGGAA 
ATTCATAGAT ACTTCGAACC ACAACTTAAG GATCTTGGTG GGCATATAGT GAGTGCACTG 
CCCGGCAACA TAATGCCACG CACAATGTGC TACAGGAATG CCGAGGGAGA GCGCCAATTG 
GCTGGATACC TGAATACCTT CATACGGAAC TATGTGGAGA GCATTAATGG AACTCTGAGG 
ATTTCCTGGG GCCTCGTGCC CGAGGACGAT ATGAGGCACT TAACCATATC AAGGCTCTCG 
AAGATACAGC ACGTGGACTT CCCACTGGGA ATCATTCCAC TTTACAACAA GACGGACAAG 
CAGCATGTGT ACATGGAGAT TTCCAGCTGG TTCCTGATGT TGCCCATGGA GACATCCGTT 
CCGCGAGCTC ATCTCTTCGT CAAGCTGGGC CTAGAGAGAC TGCTACCCAT CATAGTTGTT 
GTGGGTGCTG TGCTCGGCAA TGCTCATCGG ATCGAAGTGG GCCTGGGGCC CAGCTGGCGT 
TGCTACTACC TGGCGGATAA GGTGCTGCGA GGAGCCTTGG CACAACCCAT TGTGCTTCCG 
AGAAGGCTCT CCCCCAAGCT GATGCTTATT TATTCGCTGC TCCTGCTAAG TGGATTCTTT 
CTGAGCAACT ACTACATGGC CAGCCTGACG ACGTGGCTCG TACATCCGCC GGCGAGTGAT 
CGAATCCTGG AGTGGGATCA ATTACGCTAC CTGCATCTAA AAGTCCTTAC CATCCCCGAA 
GAGTTCAAGT ACATGTCATT GATATTGGGC ACAGATTTTA TGACAGCCTA CGGCAGTATA 
TTTCAGCTCA CGAACTCGAC GGATTTCCAG AGAAGGCGCA TCTCAATGGA TCCCTCCTAC 
GCCTACCCAG TGACCACCAG CCTTTGGCCC TTTCTAGAGC TGTCCCAAGT GAGGCTACGG 
CGACCCCTAT TCCGACGATC CTACGACATG GTGCTCCAGC CTTTTCAAGT TATGTCTTTG 
CCGCTGCCAC GGAACTCAAT TTTCCACAAG TCCCTTCTCC GCTATGCTGC TCTAACTCGC 
GAGACCGGAC TGTACTATTA CTGGTTCCGG CGCAGCTACT ACGAACTGGT GGCTCTCGGG 
AAGATCTCGT ACAAGGAGGA GGAGGGTAAC CCGTACTGCG ATCTCAAGTG GAACGACTTT 
CGTATCGTGT GGCTGGCCTT CCTGGGAGGA ACTATCATTA GTTGTCTGGC GCTCCTATTG 
GAGGTAGCTC ACTACAGGTG GCACTTGGGG AACTCCTCAC TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001137757.2
CDS	1..1725
Translation	MRLAIYVAFLSSIGNRSGFLSSLLMSLGKELHYKTILLVGGSSTCWSLEPFETGVPILNLRGENNAYPQDTFNSQMLALACLQTESEDAVKLLYRSLKDMRDTPTLLFASSEEHIHDTLFLGCFRENMLNVLALTASSKEFIYSYQAFPTFRVIKRKLVEIHRYFEPQLKDLGGHIVSALPGNIMPRTMCYRNAEGERQLAGYLNTFIRNYVESINGTLRISWGLVPEDDMRHLTISRLSKIQHVDFPLGIIPLYNKTDKQHVYMEISSWFLMLPMETSVPRAHLFVKLGLERLLPIIVVVGAVLGNAHRIEVGLGPSWRCYYLADKVLRGALAQPIVLPRRLSPKLMLIYSLLLLSGFFLSNYYMASLTTWLVHPPASDRILEWDQLRYLHLKVLTIPEEFKYMSLILGTDFMTAYGSIFQLTNSTDFQRRRISMDPSYAYPVTTSLWPFLELSQVRLRRPLFRRSYDMVLQPFQVMSLPLPRNSIFHKSLLRYAALTRETGLYYYWFRRSYYELVALGKISYKEEEGNPYCDLKWNDFRIVWLAFLGGTIISCLALLLEVAHYRWHLGNSSL

Target ORF information:

RefSeq Version	NM_001144285.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ionotropic receptor 60d (Ir60d), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144285.2

ORF Insert Sequence:

ATGCGGCTTG CCATATACGT TGCGTTTCTT AGTTCGATTG GCAATCGGAG TGGCTTCTTG 
AGCAGCTTGC TGATGTCCCT TGGGAAGGAG CTACATTACA AAACCATTCT GCTCGTAGGA 
GGTTCCTCTA CGTGCTGGAG CCTGGAGCCC TTTGAAACGG GTGTTCCCAT CTTAAACTTG 
AGAGGGGAGA ACAACGCGTA TCCACAGGAT ACTTTCAACT CACAGATGCT TGCACTTGCC 
TGCTTGCAAA CCGAAAGCGA AGATGCAGTG AAGTTGCTTT ATAGAAGTCT TAAGGATATG 
CGAGATACTC CCACCTTACT ATTCGCATCC TCGGAGGAGC ATATACACGA TACACTATTC 
CTGGGATGTT TCAGAGAAAA CATGCTAAAT GTCCTGGCAC TTACGGCTTC TAGTAAAGAG 
TTCATCTACA GCTACCAGGC ATTCCCAACA TTCCGCGTTA TAAAACGAAA GCTGGTGGAA 
ATTCATAGAT ACTTCGAACC ACAACTTAAG GATCTTGGTG GGCATATAGT GAGTGCACTG 
CCCGGCAACA TAATGCCACG CACAATGTGC TACAGGAATG CCGAGGGAGA GCGCCAATTG 
GCTGGATACC TGAATACCTT CATACGGAAC TATGTGGAGA GCATTAATGG AACTCTGAGG 
ATTTCCTGGG GCCTCGTGCC CGAGGACGAT ATGAGGCACT TAACCATATC AAGGCTCTCG 
AAGATACAGC ACGTGGACTT CCCACTGGGA ATCATTCCAC TTTACAACAA GACGGACAAG 
CAGCATGTGT ACATGGAGAT TTCCAGCTGG TTCCTGATGT TGCCCATGGA GACATCCGTT 
CCGCGAGCTC ATCTCTTCGT CAAGCTGGGC CTAGAGAGAC TGCTACCCAT CATAGTTGTT 
GTGGGTGCTG TGCTCGGCAA TGCTCATCGG ATCGAAGTGG GCCTGGGGCC CAGCTGGCGT 
TGCTACTACC TGGCGGATAA GGTGCTGCGA GGAGCCTTGG CACAACCCAT TGTGCTTCCG 
AGAAGGCTCT CCCCCAAGCT GATGCTTATT TATTCGCTGC TCCTGCTAAG TGGATTCTTT 
CTGAGCAACT ACTACATGGC CAGCCTGACG ACGTGGCTCG TACATCCGCC GGCGAGTGAT 
CGAATCCTGG AGTGGGATCA ATTACGCTAC CTGCATCTAA AAGTCCTTAC CATCCCCGAA 
GAGTTCAAGT ACATGTCATT GATATTGGGC ACAGATTTTA TGACAGCCTA CGGCAGTATA 
TTTCAGCTCA CGAACTCGAC GGATTTCCAG AGAAGGCGCA TCTCAATGGA TCCCTCCTAC 
GCCTACCCAG TGACCACCAG CCTTTGGCCC TTTCTAGAGC TGTCCCAAGT GAGGCTACGG 
CGACCCCTAT TCCGACGATC CTACGACATG GTGCTCCAGC CTTTTCAAGT TATGTCTTTG 
CCGCTGCCAC GGAACTCAAT TTTCCACAAG TCCCTTCTCC GCTATGCTGC TCTAACTCGC 
GAGACCGGAC TGTACTATTA CTGGTTCCGG CGCAGCTACT ACGAACTGGT GGCTCTCGGG 
AAGATCTCGT ACAAGGAGGA GGAGGGTAAC CCGTACTGCG ATCTCAAGTG GAACGACTTT 
CGTATCGTGT GGCTGGCCTT CCTGGGAGGA ACTATCATTA GTTGTCTGGC GCTCCTATTG 
GAGGTAGCTC ACTACAGGTG GCACTTGGGG AACTCCTCAC TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Ir60d cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

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Target ORF information:

ORF Insert Sequence:

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