Gene Symbol | MDN1 |
Entrez Gene ID | 23195 |
Full Name | midasin AAA ATPase 1 |
Synonyms | Rea1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » MDN1 cDNA ORF clone
Gene Symbol | MDN1 |
Entrez Gene ID | 23195 |
Full Name | midasin AAA ATPase 1 |
Synonyms | Rea1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011535635.2 | XP_011533937.1 | midasin isoform X1 |
XM_011535636.3 | XP_011533938.1 | midasin isoform X2 |
XM_024446382.1 | XP_024302150.1 | midasin isoform X3 |
XM_005248700.3 | XP_005248757.1 | midasin isoform X5 |
NM_014611.2 | NP_055426.1 | midasin |
NM_014611.3 | NP_055426.1 | midasin |
XM_011535636.2 | XP_011533938.1 | midasin isoform X2 |
XM_006715405.3 | XP_006715468.1 | midasin isoform X4 |
Canis lupus familiaris (dog) | MDN1 | XP_005627693.1 |
Pan troglodytes (chimpanzee) | MDN1 | XP_518639.3 |
Bos taurus (cattle) | MDN1 | NP_001193097.1 |
Mus musculus (house mouse) | Mdn1 | NP_001074861.1 |
Rattus norvegicus (Norway rat) | Mdn1 | XP_006238044.1 |
Xenopus tropicalis (tropical clawed frog) | mdn1 | XP_002940362.2 |
Gallus gallus (chicken) | MDN1 | XP_004940444.1 |
Drosophila melanogaster (fruit fly) | CG13185 | NP_001097279.2 |
Danio rerio (zebrafish) | mdn1 | XP_003200751.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007388 | XP_308444.4 |
Homo sapiens (human) | MDN1 | NP_055426.1 |
The Crystal Structure of the Ubiquitin-like Domain of Ribosome Assembly Factor Ytm1 and Characterization of Its Interaction with the AAA-ATPase Midasin.
Romes EM, Sobhany M, Stanley RE
The Journal of biological chemistry291(2)882-93(2016 Jan)
The SUMO system controls nucleolar partitioning of a novel mammalian ribosome biogenesis complex.
Finkbeiner E, Haindl M, Muller S
The EMBO journal30(6)1067-78(2011 Mar)
Defining the membrane proteome of NK cells.
Ghosh D, Lippert D, Krokhin O, Cortens JP, Wilkins JA
Journal of mass spectrometry : JMS45(1)1-25(2010 Jan)
Nucleolar proteome dynamics.
Andersen JS, Lam YW, Leung AK, Ong SE, Lyon CE, Lamond AI, Mann M
Nature433(7021)77-83(2005 Jan)
Large-scale characterization of HeLa cell nuclear phosphoproteins.
Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Vill?n J, Li J, Cohn MA, Cantley LC, Gygi SP
Proceedings of the National Academy of Sciences of the United States of America101(33)12130-5(2004 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
the crystal structure of the UBL domain of the WDR12 homologue from S. cerevisiae at 1.7 A resolution is reported and demonstrated that human midasin binds to WDR12 as well as Nle1 through their respective UBL domains.
Title: The Crystal Structure of the Ubiquitin-like Domain of Ribosome Assembly Factor Ytm1 and Characterization of Its Interaction with the AAA-ATPase Midasin.
The following MDN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MDN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu24107 | |
Clone ID Related Accession (Same CDS sequence) | NM_014611.2 , NM_014611.3 | |
Accession Version | NM_014611.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 16791bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-31 | |
Organism | Homo sapiens(human) | |
Product | midasin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP360573.1, AF503925.1, AL096678.8, BC036888.1 and AK027048.1. This sequence is a reference standard in the RefSeqGene project. On Mar 5, 2014 this sequence version replaced NM_014611.1. ##Evidence-Data-START## Transcript exon combination :: AF503925.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055426.1 |
CDS | 188..16978 |
Translation |
Target ORF information:
Target ORF information:
|
NM_014611.2 |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu24107 | |
Clone ID Related Accession (Same CDS sequence) | NM_014611.2 , NM_014611.3 | |
Accession Version | NM_014611.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 16791bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-16 | |
Organism | Homo sapiens(human) | |
Product | midasin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP360573.1, AF503925.1, AL096678.8, BC036888.1 and AK027048.1. This sequence is a reference standard in the RefSeqGene project. On Nov 22, 2018 this sequence version replaced NM_014611.2. ##Evidence-Data-START## Transcript exon combination :: AF503925.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000369393.8/ ENSP00000358400.3 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055426.1 |
CDS | 188..16978 |
Translation |
Target ORF information:
Target ORF information:
|
NM_014611.3 |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu105750 | |
Clone ID Related Accession (Same CDS sequence) | XM_024446382.1 | |
Accession Version | XM_024446382.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 14247bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024302150.1 |
CDS | 185..14431 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024446382.1 |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu40715 | |
Clone ID Related Accession (Same CDS sequence) | XM_006715405.3 | |
Accession Version | XM_006715405.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11235bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006715405.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCTTTC AAGTGCAGCA TGAAAAGACG AAGATTTTTG GGTGTCAGAA TCCCTTTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006715468.1 |
CDS | 1222..12456 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006715405.3 |
1 | ATGAGCTTTC AAGTGCAGCA TGAAAAGACG AAGATTTTTG GGTGTCAGAA TCCCTTTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu40716 | |
Clone ID Related Accession (Same CDS sequence) | XM_005248700.3 | |
Accession Version | XM_005248700.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced XM_005248700.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAACCA GACTATTTCG TATCACTCCC TATGATGTTC AGTTGGGCTA CTCAGTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005248757.1 |
CDS | 135..10910 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005248700.3 |
1 | ATGGGAACCA GACTATTTCG TATCACTCCC TATGATGTTC AGTTGGGCTA CTCAGTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu65676 | |
Clone ID Related Accession (Same CDS sequence) | XM_011535635.2 | |
Accession Version | XM_011535635.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 16500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011535635.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAAAC TCATTGGTAA CCATCCTGAT GTCCTCCCGT TTGCCCTGAG ATATTTCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011533937.1 |
CDS | 284..16783 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011535635.2 |
1 | ATGAGCAAAC TCATTGGTAA CCATCCTGAT GTCCTCCCGT TTGCCCTGAG ATATTTCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu65677 | |
Clone ID Related Accession (Same CDS sequence) | XM_011535636.3 , XM_011535636.2 | |
Accession Version | XM_011535636.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 15729bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011535636.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011533938.1 |
CDS | 185..15913 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011535636.3 |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu65677 | |
Clone ID Related Accession (Same CDS sequence) | XM_011535636.3 , XM_011535636.2 | |
Accession Version | XM_011535636.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 15729bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | midasin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000006.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011535636.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011533938.1 |
CDS | 158..15886 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011535636.2 |
1 | ATGGAGCACT TCTTGCTGGA GGTGGCAGCC GCGCCGCTGC GGTTAATCGC AGCCAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Crystal Structure of the Ubiquitin-like Domain of Ribosome Assembly Factor Ytm1 and Characterization of Its Interaction with the AAA-ATPase Midasin. |
The SUMO system controls nucleolar partitioning of a novel mammalian ribosome biogenesis complex. |
Defining the membrane proteome of NK cells. |
Nucleolar proteome dynamics. |
Large-scale characterization of HeLa cell nuclear phosphoproteins. |