Gene Symbol | GTF2F1 |
Entrez Gene ID | 2962 |
Full Name | general transcription factor IIF subunit 1 |
Synonyms | BTF4,RAP74,TF2F1,TFIIF |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » GTF2F1 cDNA ORF clone
gRNAs
Gene Symbol | GTF2F1 |
Entrez Gene ID | 2962 |
Full Name | general transcription factor IIF subunit 1 |
Synonyms | BTF4,RAP74,TF2F1,TFIIF |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_002096.3 | NP_002087.2 | general transcription factor IIF subunit 1 |
XM_024451475.1 | XP_024307243.1 | general transcription factor IIF subunit 1 isoform X1 |
NM_002096.2 | NP_002087.2 | general transcription factor IIF subunit 1 |
Bos taurus (cattle) | GTF2F1 | NP_001015527.1 |
Danio rerio (zebrafish) | gtf2f1 | NP_956023.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002779 | XP_312144.5 |
Xenopus tropicalis (tropical clawed frog) | gtf2f1 | NP_001116271.1 |
Homo sapiens (human) | GTF2F1 | NP_002087.2 |
Pan troglodytes (chimpanzee) | GTF2F1 | XP_512314.2 |
GTF2F1 | XP_001087325.1 | |
Rattus norvegicus (Norway rat) | Gtf2f1 | NP_001007712.1 |
Canis lupus familiaris (dog) | GTF2F1 | XP_005633036.1 |
Mus musculus (house mouse) | Gtf2f1 | NP_598562.1 |
Regulation of Androgen Receptor Activity by Transient Interactions of Its Transactivation Domain with General Transcription Regulators.
De Mol E, Szulc E, Di Sanza C, Mart?nez-Crist?bal P, Bertoncini CW, Fenwick RB, Frigol?-Vivas M, Mas?n M, Hunter I, Buz?n V, Brun-Heath I, Garc?a J, De Fabritiis G, Est?banez-Perpi?? E, McEwan IJ, Nebreda ?R, Salvatella X
Structure (London, England : 1993)26(1)145-152.e3(2018 Jan)
Near-atomic resolution visualization of human transcription promoter opening.
He Y, Yan C, Fang J, Inouye C, Tjian R, Ivanov I, Nogales E
Nature533(7603)359-65(2016 05)
A new paradigm for transcription factor TFIIB functionality.
Gelev V, Zabolotny JM, Lange M, Hiromura M, Yoo SW, Orlando JS, Kushnir A, Horikoshi N, Paquet E, Bachvarov D, Schaffer PA, Usheva A
Scientific reports43664(2014 Jan)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
These results suggest that Mediator structural shifts induced by activator binding help stably orient pol II prior to transcription initiation within the human mediator-RNA polymerase II-TFIIF assembly.
Title: Activator-mediator binding stabilizes RNA polymerase II orientation within the human mediator-RNA polymerase II-TFIIF assembly.
Gdown1 competes with TFIIF for binding to the RPB1 and RPB5 subunits of Pol II, thereby inhibiting an essential function of TFIIF in preinitiation complex assembly.
Title: Transcriptional regulation by Pol II(G) involving mediator and competitive interactions of Gdown1 and TFIIF with Pol II.
Data show that TFIIF has an important role in stabilizing TFIIB within the PIC and after transcription initiates.
Title: Transcription factor TFIIF is not required for initiation by RNA polymerase II, but it is essential to stabilize transcription factor TFIIB in early elongation complexes.
NMR and thermodynamic studies further elucidate the complex molecular mechanism by which TFIIF and FCP1 cooperate for RNAPII recycling.
Title: NMR structure of a complex formed by the carboxyl-terminal domain of human RAP74 and a phosphorylated peptide from the central domain of the FCP1 phosphatase.
Observational study of gene-disease association. (HuGE Navigator)
Title: Evaluating new candidate SNPs as low penetrance risk factors in sporadic breast cancer: a two-stage Spanish case-control study.
The following GTF2F1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GTF2F1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu03831![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_002096.3 , NM_002096.2 | |
Accession Version | NM_002096.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | general transcription factor IIF subunit 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from X64037.1, BC013007.2 and X64002.1. On Nov 23, 2018 this sequence version replaced NM_002096.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X64002.1, SRR1660807.46796.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000394456.10/ ENSP00000377969.3 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_002087.2 |
CDS | 170..1723 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03831![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_002096.3 , NM_002096.2 | |
Accession Version | NM_002096.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | general transcription factor IIF subunit 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AA323384.1, X64037.1, BC013007.2 and X64002.1. On Aug 17, 2007 this sequence version replaced NM_002096.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC013007.2, SRR1803617.195954.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_002087.2 |
CDS | 286..1839 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu104663 | |
Clone ID Related Accession (Same CDS sequence) | XM_024451475.1 | |
Accession Version | XM_024451475.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1629bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | general transcription factor IIF subunit 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000019.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024307243.1 |
CDS | 192..1820 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC TAGGCCCTAG CAGCCAGAAT GTCACTGAAT ACGTCGTTCG AGTTCCTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Regulation of Androgen Receptor Activity by Transient Interactions of Its Transactivation Domain with General Transcription Regulators. |
Near-atomic resolution visualization of human transcription promoter opening. |
A new paradigm for transcription factor TFIIB functionality. |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |