LINJ_17_1050 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_17_1050
Entrez Gene ID	5068167
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001464726.1	XP_001464763.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_17_1050 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_17_1050 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01923	XM_001464726.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_17_1050 ( XM_001464726.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001464763.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc01923
Clone ID Related Accession (Same CDS sequence)	XM_001464726.1
Accession Version	XM_001464726.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3207bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009401). COMPLETENESS: incomplete on both ends.

ATGAATGCGC GAACCACGCG CGATGGCGTG GCGGAGGTGT TTGAGCGGGA TCGAGTGGCG 
CTCATCATGC AGCAGGCACT CGCTCATCGT TACTCCCATC CGCTGTCGTC GCCGCTCTTT 
GATGGCGTGC ATGACGGTCA CCTTGTGGAC TCTGAGGGCT ACGGTACCGC TACATCCGAT 
ATGGCCGCCA AGTCGCCCTC CTCTCCACCT CGCTTGACAT GTCCGTTGCA CTATACGCTG 
CGCCGATGCT CTCGCACCGA GTATTATCTT CGTTTTACTC CACCCATTTC TGACACGACA 
GGGTTCATGG AGTCGAGCAC GGCGGGGGGC TCTCCCTCTG TGTCGACGCA GTGGCAGCCG 
CGGGACGACG AAGCCTCTGT AGCGACTGCC GTGGCCGCAG AGTGCTGGCG TCACGCCGCC 
TTCACGGCAC TGACGCAGAG AGACCTGCGC CGACTGTGCG GACTGCCCGA GGAAACCGGG 
CCCGGCACCA ACGGACACCG GCACGAGCCC ACACCGTCGC CGCCTTCTCT TTCCGCGACG 
CCGGTGACGT CGCATCCCCG TCGCTCCTCT CCGCCTCTCG TGACTCACCA TGAGTTTTTT 
GAGATGCCGT CCCGGTGGGT CATGCAGAGC CTCGGCGAGG TGGATCAGCA CACTTTTCAC 
AGTTACGCGG AATGGGATTG CCGGCGCCTT GTCACTCCAC TCGATGTCGG GGCCACCGTC 
GTGAAGCAGG CAGTGGGAGC GGAGGCAGTA GTCAGAGGGG CGGCTGCCCC CGCTCCTGGC 
GGTGATCAGA CTGCCTCCCC CGGAGGTCCG GCAGCATCGC TGTATTCGCC GGCGCAGATG 
ATGACAGAGA GAGGTGGTGC CGCGCCACCA TCGTCCTCGT ATCTGAGTCG CACGTCTGCG 
TCCTCGTCGG AGGCGGAGCA TATGCTGCGC CGTCAAGAGC GTTTCCGTGT GCGCTCAACG 
GCAGCTATGG CGCGCGGGGC ATACTGGGTG GACGTCGTGC CGCTCACGGC GGAGGAAGAG 
TGTGATAGGA GGGCGATAAG AGTAACGGCA AGCACAGACA CTGCGATTTC TGCCGTTGCC 
GACACCGAGA ACAATAGCAT CACCTGTGAG CGCGTCGACC GCGATGCGTT GCTGCTGCAC 
CCTCCTGTGG CGCTTTATGT GGACCCACTT CTGCCCTGTG ACGAGCTCTA CAGCGAACGC 
GGCGTCAACA CCAGCGTCTA TGTCTTCTTC CTGCGCGCAC TTCAGCAGCA GCAACACAAG 
CTCGCAGACG GTCGCATCTC GTGCGATACC GCCGCCTTCG ACAGCAGCAG TGACTGTAGC 
GGTATGCGCC CCGGCAAAGG AACCGGTATG CCTGACCCAC CCGAGGCCGC AGCGGCGCTG 
GCCCTACAGC TTGCCTTGTG CGCACGACAG CGGCGTCTGG AGTTAGCGGG ACGCATTCAT 
CGAGCAATCA ACGCCGCCAA TCCCTCATCT GTGCTGCTCC GCGTACCCTC GAGAGAAGTC 
GCGACGTGTG CCATAGAAGG CGCCGCTGTC ACCTCTGCTA AGTGCTCGGG GGTTGCCGCA 
CCTGCGGTGC TGCTGCAGGT GCGCGTGGAC CATGCTCGAG GATCTGTGCA GCTTCGCGCG 
CTGACACTGG AGGATTCGGC GGACAGTACC AGTGACCTGC TAGGAAGCGA GTGGCATGCA 
AGCGGACGTG CGGCAACACC CACCTCGTCA GCTGCGGCAC GACCCCGTCT GCAAGACACG 
GAAACCTCCA GTGCTGCCTA CACCAAGCGG AGAAGAGAGG ACGCGGAAGA AGGCGAGGAG 
GCAGTGCGAT ACAGCCACAA TGCTGCTACA ACCAAGGCGA CGCGGTCGCC AACAGTGGAG 
GTGCTGCTCC GCTCTGCTTG GAAACTGGCT GCTCTTTACG ATATAACGCG TTCCGCGTCG 
CTGGAGCCGC AACAGGCAGA CCAGGGCGCC AGCGACGAAA GCAGAGCGGC GAGGGTGAAA 
AGCCCCGAAG GGGCGCAGAT GCGCGCATCT CTGCCGGCTT CATTGCCTTC GTGGCTCGCG 
ACGTCGCTCT TGAGACGCCT TACAGGCAGG CCGCAAGCGG TTTCTGGCCT AACTGCATCA 
GGAACCACTG ATGTCCACAG TGAAGCGTCA TGCGACTCTA GCTGGAGCAC TGTGGCGCTT 
CATCGAGGGG ACGCATGCTT ACCGTCGACA ATGCCGCTTG CCGGTGAAAG GGTCCCTTGC 
CTACCCCTGT CTGCTGGACG GATCGACCAC CCAAGCGCCT CTTCGCCTCC TCTGTTGTTG 
GCCGATGACG ATCCACCAAC TGGTGTTCCC GCGGCTACCG CCATAGCCAG CACCACCCTG 
ACCACGGCCA CAACTACAGC CGAAGAGCGC ATCTTTCTTG GGCGACTTTT TATCCTTCTC 
CTTCGGTATC GTACGCTCTT CGGGGGGCAT GGGTACAACC AAGGCCCACA GGCTGCTTTG 
CCGCCCCCGG TGATGGAGCA CCTTGCCGCC GCCTTCGAGA TCAGCGCCGA GGCGTTCGCG 
TCACCGCTGA ACGCGCAGCT GCCTCAGTTT GGCTCTCTGT TCCCCGACAC AGACAGGCAC 
TTTGGAAGCA TGGGGTCCTT CTTTGACCTT CAGTTCGGCG GTGCCAGCGG CGACTGTCAC 
GCTCAGCGAG CGCCCATACC AACCGACTGC GCTGCACCGC CGCCAGGGTG CCATGTCGAA 
GTCAACCCGC CCTTCGACAC GACTCTTCTT CGGCACATGG GGACGCATCT GCTGTCGTGT 
CTGAAGCGTG CGCAGGAGTC GATGCAGAGC CTTCTGTTCC TCATTGTGCT GCCCAGCCAT 
GACTTGACGG ACGCGGAGAA GGCGGCGGCA GCGGTGGCAA GCACGCGGCT GCCAACGCAA 
GCGGCCACCG CGAAGCGCCT CGGCAGCGAC CAGTTGCGTG GCAGCAGTGC TGCCACTGCT 
TCGGTGCCAC CGAGTACCGA ACGCACGCTG CGTGAGTCGC CGTACTGCCT TGGCCACGTC 
CTCTGCGCGG CGGCGGAGTC GGCCTACGTG GACGGCCACC AGCACCTCCT GCAAAGTCCC 
TTCTTTCGTA TCGAGACGCC GACGCGGCTG ATTCTTCTCG GCAACACGGT GGCTCGCACG 
CGCTTCCCTC ACGCAGCCGC GCAGCTGGAG TCGGTGCGTG TGGCTTGGAA GGAGCTGACG 
GAGAGCGCGC TGCTGCAGCA GCGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001464763.1
CDS	1..3207
Translation	MNARTTRDGVAEVFERDRVALIMQQALAHRYSHPLSSPLFDGVHDGHLVDSEGYGTATSDMAAKSPSSPPRLTCPLHYTLRRCSRTEYYLRFTPPISDTTGFMESSTAGGSPSVSTQWQPRDDEASVATAVAAECWRHAAFTALTQRDLRRLCGLPEETGPGTNGHRHEPTPSPPSLSATPVTSHPRRSSPPLVTHHEFFEMPSRWVMQSLGEVDQHTFHSYAEWDCRRLVTPLDVGATVVKQAVGAEAVVRGAAAPAPGGDQTASPGGPAASLYSPAQMMTERGGAAPPSSSYLSRTSASSSEAEHMLRRQERFRVRSTAAMARGAYWVDVVPLTAEEECDRRAIRVTASTDTAISAVADTENNSITCERVDRDALLLHPPVALYVDPLLPCDELYSERGVNTSVYVFFLRALQQQQHKLADGRISCDTAAFDSSSDCSGMRPGKGTGMPDPPEAAAALALQLALCARQRRLELAGRIHRAINAANPSSVLLRVPSREVATCAIEGAAVTSAKCSGVAAPAVLLQVRVDHARGSVQLRALTLEDSADSTSDLLGSEWHASGRAATPTSSAAARPRLQDTETSSAAYTKRRREDAEEGEEAVRYSHNAATTKATRSPTVEVLLRSAWKLAALYDITRSASLEPQQADQGASDESRAARVKSPEGAQMRASLPASLPSWLATSLLRRLTGRPQAVSGLTASGTTDVHSEASCDSSWSTVALHRGDACLPSTMPLAGERVPCLPLSAGRIDHPSASSPPLLLADDDPPTGVPAATAIASTTLTTATTTAEERIFLGRLFILLLRYRTLFGGHGYNQGPQAALPPPVMEHLAAAFEISAEAFASPLNAQLPQFGSLFPDTDRHFGSMGSFFDLQFGGASGDCHAQRAPIPTDCAAPPPGCHVEVNPPFDTTLLRHMGTHLLSCLKRAQESMQSLLFLIVLPSHDLTDAEKAAAAVASTRLPTQAATAKRLGSDQLRGSSAATASVPPSTERTLRESPYCLGHVLCAAAESAYVDGHQHLLQSPFFRIETPTRLILLGNTVARTRFPHAAAQLESVRVAWKELTESALLQQR

Target ORF information:

RefSeq Version	XM_001464726.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001464726.1

ORF Insert Sequence:

ATGAATGCGC GAACCACGCG CGATGGCGTG GCGGAGGTGT TTGAGCGGGA TCGAGTGGCG 
CTCATCATGC AGCAGGCACT CGCTCATCGT TACTCCCATC CGCTGTCGTC GCCGCTCTTT 
GATGGCGTGC ATGACGGTCA CCTTGTGGAC TCTGAGGGCT ACGGTACCGC TACATCCGAT 
ATGGCCGCCA AGTCGCCCTC CTCTCCACCT CGCTTGACAT GTCCGTTGCA CTATACGCTG 
CGCCGATGCT CTCGCACCGA GTATTATCTT CGTTTTACTC CACCCATTTC TGACACGACA 
GGGTTCATGG AGTCGAGCAC GGCGGGGGGC TCTCCCTCTG TGTCGACGCA GTGGCAGCCG 
CGGGACGACG AAGCCTCTGT AGCGACTGCC GTGGCCGCAG AGTGCTGGCG TCACGCCGCC 
TTCACGGCAC TGACGCAGAG AGACCTGCGC CGACTGTGCG GACTGCCCGA GGAAACCGGG 
CCCGGCACCA ACGGACACCG GCACGAGCCC ACACCGTCGC CGCCTTCTCT TTCCGCGACG 
CCGGTGACGT CGCATCCCCG TCGCTCCTCT CCGCCTCTCG TGACTCACCA TGAGTTTTTT 
GAGATGCCGT CCCGGTGGGT CATGCAGAGC CTCGGCGAGG TGGATCAGCA CACTTTTCAC 
AGTTACGCGG AATGGGATTG CCGGCGCCTT GTCACTCCAC TCGATGTCGG GGCCACCGTC 
GTGAAGCAGG CAGTGGGAGC GGAGGCAGTA GTCAGAGGGG CGGCTGCCCC CGCTCCTGGC 
GGTGATCAGA CTGCCTCCCC CGGAGGTCCG GCAGCATCGC TGTATTCGCC GGCGCAGATG 
ATGACAGAGA GAGGTGGTGC CGCGCCACCA TCGTCCTCGT ATCTGAGTCG CACGTCTGCG 
TCCTCGTCGG AGGCGGAGCA TATGCTGCGC CGTCAAGAGC GTTTCCGTGT GCGCTCAACG 
GCAGCTATGG CGCGCGGGGC ATACTGGGTG GACGTCGTGC CGCTCACGGC GGAGGAAGAG 
TGTGATAGGA GGGCGATAAG AGTAACGGCA AGCACAGACA CTGCGATTTC TGCCGTTGCC 
GACACCGAGA ACAATAGCAT CACCTGTGAG CGCGTCGACC GCGATGCGTT GCTGCTGCAC 
CCTCCTGTGG CGCTTTATGT GGACCCACTT CTGCCCTGTG ACGAGCTCTA CAGCGAACGC 
GGCGTCAACA CCAGCGTCTA TGTCTTCTTC CTGCGCGCAC TTCAGCAGCA GCAACACAAG 
CTCGCAGACG GTCGCATCTC GTGCGATACC GCCGCCTTCG ACAGCAGCAG TGACTGTAGC 
GGTATGCGCC CCGGCAAAGG AACCGGTATG CCTGACCCAC CCGAGGCCGC AGCGGCGCTG 
GCCCTACAGC TTGCCTTGTG CGCACGACAG CGGCGTCTGG AGTTAGCGGG ACGCATTCAT 
CGAGCAATCA ACGCCGCCAA TCCCTCATCT GTGCTGCTCC GCGTACCCTC GAGAGAAGTC 
GCGACGTGTG CCATAGAAGG CGCCGCTGTC ACCTCTGCTA AGTGCTCGGG GGTTGCCGCA 
CCTGCGGTGC TGCTGCAGGT GCGCGTGGAC CATGCTCGAG GATCTGTGCA GCTTCGCGCG 
CTGACACTGG AGGATTCGGC GGACAGTACC AGTGACCTGC TAGGAAGCGA GTGGCATGCA 
AGCGGACGTG CGGCAACACC CACCTCGTCA GCTGCGGCAC GACCCCGTCT GCAAGACACG 
GAAACCTCCA GTGCTGCCTA CACCAAGCGG AGAAGAGAGG ACGCGGAAGA AGGCGAGGAG 
GCAGTGCGAT ACAGCCACAA TGCTGCTACA ACCAAGGCGA CGCGGTCGCC AACAGTGGAG 
GTGCTGCTCC GCTCTGCTTG GAAACTGGCT GCTCTTTACG ATATAACGCG TTCCGCGTCG 
CTGGAGCCGC AACAGGCAGA CCAGGGCGCC AGCGACGAAA GCAGAGCGGC GAGGGTGAAA 
AGCCCCGAAG GGGCGCAGAT GCGCGCATCT CTGCCGGCTT CATTGCCTTC GTGGCTCGCG 
ACGTCGCTCT TGAGACGCCT TACAGGCAGG CCGCAAGCGG TTTCTGGCCT AACTGCATCA 
GGAACCACTG ATGTCCACAG TGAAGCGTCA TGCGACTCTA GCTGGAGCAC TGTGGCGCTT 
CATCGAGGGG ACGCATGCTT ACCGTCGACA ATGCCGCTTG CCGGTGAAAG GGTCCCTTGC 
CTACCCCTGT CTGCTGGACG GATCGACCAC CCAAGCGCCT CTTCGCCTCC TCTGTTGTTG 
GCCGATGACG ATCCACCAAC TGGTGTTCCC GCGGCTACCG CCATAGCCAG CACCACCCTG 
ACCACGGCCA CAACTACAGC CGAAGAGCGC ATCTTTCTTG GGCGACTTTT TATCCTTCTC 
CTTCGGTATC GTACGCTCTT CGGGGGGCAT GGGTACAACC AAGGCCCACA GGCTGCTTTG 
CCGCCCCCGG TGATGGAGCA CCTTGCCGCC GCCTTCGAGA TCAGCGCCGA GGCGTTCGCG 
TCACCGCTGA ACGCGCAGCT GCCTCAGTTT GGCTCTCTGT TCCCCGACAC AGACAGGCAC 
TTTGGAAGCA TGGGGTCCTT CTTTGACCTT CAGTTCGGCG GTGCCAGCGG CGACTGTCAC 
GCTCAGCGAG CGCCCATACC AACCGACTGC GCTGCACCGC CGCCAGGGTG CCATGTCGAA 
GTCAACCCGC CCTTCGACAC GACTCTTCTT CGGCACATGG GGACGCATCT GCTGTCGTGT 
CTGAAGCGTG CGCAGGAGTC GATGCAGAGC CTTCTGTTCC TCATTGTGCT GCCCAGCCAT 
GACTTGACGG ACGCGGAGAA GGCGGCGGCA GCGGTGGCAA GCACGCGGCT GCCAACGCAA 
GCGGCCACCG CGAAGCGCCT CGGCAGCGAC CAGTTGCGTG GCAGCAGTGC TGCCACTGCT 
TCGGTGCCAC CGAGTACCGA ACGCACGCTG CGTGAGTCGC CGTACTGCCT TGGCCACGTC 
CTCTGCGCGG CGGCGGAGTC GGCCTACGTG GACGGCCACC AGCACCTCCT GCAAAGTCCC 
TTCTTTCGTA TCGAGACGCC GACGCGGCTG ATTCTTCTCG GCAACACGGT GGCTCGCACG 
CGCTTCCCTC ACGCAGCCGC GCAGCTGGAG TCGGTGCGTG TGGCTTGGAA GGAGCTGACG 
GAGAGCGCGC TGCTGCAGCA GCGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_17_1050 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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