LINJ_34_4080 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_34_4080
Entrez Gene ID	5072845
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001468728.1	XP_001468765.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_34_4080 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_34_4080 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc06111	XM_001468728.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_34_4080 ( XM_001468728.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001468765.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc06111
Clone ID Related Accession (Same CDS sequence)	XM_001468728.1
Accession Version	XM_001468728.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009418). COMPLETENESS: incomplete on both ends.

ATGGCGTCAA AAAGGCTTCG GTCAAACGTT GACGTAGTGG GCGGCATCAA CGAGTTACTG 
AACCTTCCGG TCCGCTCTCC GCCGCACGGG GAGGAACGCC TCGACACTAC ATCGTTCAGT 
TGTCAGCCGA ACTCGTTCGT GCGAGTCACA GAGAGCGACG ATATGCGCCC TTCTGCGTTG 
AAGCGCCTTC GGACCTCTGA ATCGTCCGCT GGTGTGTCGT CCCGCAGCCC CAGCTCCGCC 
TCGCCTTCCT CGCCACGCAC GACGAGTGAC AGCGTCGGCG GCGATGAACT CGACCTGCTG 
CGGCGCAAAG ACGAGGAAGT GGCCGACATG GCGCTCTTTC TCGCGAAAAC CGTCGGTGAG 
ACGTCGTCGC GGCACTCCCT CGCGGAGCTT GTCGGCCTTC TCGTCCGTAG CGGTGTGCCG 
CGTGTGGCGT TGGCATTGAA GCGAGTGGGC GCGCAGACGA CCTTTGTGGG CAATCTGCAT 
CAGGCGACTT CGTTCACGGG CAATGAGCGC CGAATCGCCG TTGCTCTCTT TTCCAGTCTC 
ATGACCCACG TCGACGCGGA GGCGCTGTTC CAGAAGTGCG TGGTGACGTT TCTCGTCAAG 
TCTTTGACTC TGGCGGACTG GCAAGAAGCC TCACCTGCTC TTGCGCACCG CATCGCATCG 
CATTGGTCGG CGCGCCGGAA GCAGAAAGGA ACGGCACAGC AACCGCCATC CGGCAACTCA 
TGCGGCGTGG CAGACGGCCT CGAGAGCCAA GTAGCGAAGC TGTGCGGGGG TGTAGCGGAG 
AGCTCTGGAA GCTATGAAGA CAAAAGCTGC GCCTCACTCG CCCTCCGCTC GCTCCTGACA 
ATCATGTTCG CCTACAATAC GAGCCCTCAC ATCGCTGCCT CGCGACATCT CTCCGTGCCG 
CTCCTCTTCG CCAACGCCGG TGGGCTTCAG CAACTAGGCA AGCTTTTGAG CAGCAGGGAG 
ATGCAAGAGC ATGCGCTGGC GCTGCTAGAG GTCCTGACAG CAACAGAGGA GCTCAGTCTG 
CAGAATGACG GACTTTTGGA GCTTGTGCCT GCGCTTGTAG CGCAGCTGCG CACGAGTGCG 
GTTGAAGTAC CCGTACTCAA GGTTCTCACG AACATCACGA ACATCCTGCC GCACGCCCTT 
TCAGCGACCG GCACTGTGAA GCCATTCACG CAATTTGCGC TTGAGACCCT TTCACGTTCG 
CGGGCGCTCA GCACTCCTGA CGAGACCGAA ATCTTCGCCC TTTGCTGCGC CATCAACGTG 
GTAAAGTACG AGTCGAAGGA GAAGGAGTCT CCGGAGGCAG AGCTTGCCTC GGCCCTTGTT 
GCTTCGCAGG ATACGCTGAT GTCCCTCGCA TGCGTGATGA TGGAGAGCTA CCGGTGCAGC 
AGTACGGAGC AGCTGGTACG CAGTGGCTAT TACGCACTTC TGCTAGGCGC ACTCTCGTTG 
GTGCCTGTTG CCGAAGAAGA AGGTAGCACC ACGTTGCGTG TGCCCGTGAT GACGGCTGTG 
GCTAGGGTGT CGGATGGCCA TTCCGTTGGG CTTACGGCGG GCCACCAACC CATGCGCATT 
GTTGTCGCCA TCATTCAAGA GTTCCTCTTG TTTCAGAGCT CGGCGGGGAC GCTGACAAAG 
GAGGCGGTGC TGGAGATGAA GGCGCTGGTG GACCGCATTC TCAGCAGCAA TCACATCGAC 
GTTGCTTCGC ACGGTGACCG CGGAACCACT ACTGCGGAAA CCATCACCGC GGTGTCGACG 
GACAAGGACG ACGACCTCGT TCTGGGCCAA CTGCTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001468765.1
CDS	1..1779
Translation	MASKRLRSNVDVVGGINELLNLPVRSPPHGEERLDTTSFSCQPNSFVRVTESDDMRPSALKRLRTSESSAGVSSRSPSSASPSSPRTTSDSVGGDELDLLRRKDEEVADMALFLAKTVGETSSRHSLAELVGLLVRSGVPRVALALKRVGAQTTFVGNLHQATSFTGNERRIAVALFSSLMTHVDAEALFQKCVVTFLVKSLTLADWQEASPALAHRIASHWSARRKQKGTAQQPPSGNSCGVADGLESQVAKLCGGVAESSGSYEDKSCASLALRSLLTIMFAYNTSPHIAASRHLSVPLLFANAGGLQQLGKLLSSREMQEHALALLEVLTATEELSLQNDGLLELVPALVAQLRTSAVEVPVLKVLTNITNILPHALSATGTVKPFTQFALETLSRSRALSTPDETEIFALCCAINVVKYESKEKESPEAELASALVASQDTLMSLACVMMESYRCSSTEQLVRSGYYALLLGALSLVPVAEEEGSTTLRVPVMTAVARVSDGHSVGLTAGHQPMRIVVAIIQEFLLFQSSAGTLTKEAVLEMKALVDRILSSNHIDVASHGDRGTTTAETITAVSTDKDDDLVLGQLL

Target ORF information:

RefSeq Version	XM_001468728.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001468728.1

ORF Insert Sequence:

ATGGCGTCAA AAAGGCTTCG GTCAAACGTT GACGTAGTGG GCGGCATCAA CGAGTTACTG 
AACCTTCCGG TCCGCTCTCC GCCGCACGGG GAGGAACGCC TCGACACTAC ATCGTTCAGT 
TGTCAGCCGA ACTCGTTCGT GCGAGTCACA GAGAGCGACG ATATGCGCCC TTCTGCGTTG 
AAGCGCCTTC GGACCTCTGA ATCGTCCGCT GGTGTGTCGT CCCGCAGCCC CAGCTCCGCC 
TCGCCTTCCT CGCCACGCAC GACGAGTGAC AGCGTCGGCG GCGATGAACT CGACCTGCTG 
CGGCGCAAAG ACGAGGAAGT GGCCGACATG GCGCTCTTTC TCGCGAAAAC CGTCGGTGAG 
ACGTCGTCGC GGCACTCCCT CGCGGAGCTT GTCGGCCTTC TCGTCCGTAG CGGTGTGCCG 
CGTGTGGCGT TGGCATTGAA GCGAGTGGGC GCGCAGACGA CCTTTGTGGG CAATCTGCAT 
CAGGCGACTT CGTTCACGGG CAATGAGCGC CGAATCGCCG TTGCTCTCTT TTCCAGTCTC 
ATGACCCACG TCGACGCGGA GGCGCTGTTC CAGAAGTGCG TGGTGACGTT TCTCGTCAAG 
TCTTTGACTC TGGCGGACTG GCAAGAAGCC TCACCTGCTC TTGCGCACCG CATCGCATCG 
CATTGGTCGG CGCGCCGGAA GCAGAAAGGA ACGGCACAGC AACCGCCATC CGGCAACTCA 
TGCGGCGTGG CAGACGGCCT CGAGAGCCAA GTAGCGAAGC TGTGCGGGGG TGTAGCGGAG 
AGCTCTGGAA GCTATGAAGA CAAAAGCTGC GCCTCACTCG CCCTCCGCTC GCTCCTGACA 
ATCATGTTCG CCTACAATAC GAGCCCTCAC ATCGCTGCCT CGCGACATCT CTCCGTGCCG 
CTCCTCTTCG CCAACGCCGG TGGGCTTCAG CAACTAGGCA AGCTTTTGAG CAGCAGGGAG 
ATGCAAGAGC ATGCGCTGGC GCTGCTAGAG GTCCTGACAG CAACAGAGGA GCTCAGTCTG 
CAGAATGACG GACTTTTGGA GCTTGTGCCT GCGCTTGTAG CGCAGCTGCG CACGAGTGCG 
GTTGAAGTAC CCGTACTCAA GGTTCTCACG AACATCACGA ACATCCTGCC GCACGCCCTT 
TCAGCGACCG GCACTGTGAA GCCATTCACG CAATTTGCGC TTGAGACCCT TTCACGTTCG 
CGGGCGCTCA GCACTCCTGA CGAGACCGAA ATCTTCGCCC TTTGCTGCGC CATCAACGTG 
GTAAAGTACG AGTCGAAGGA GAAGGAGTCT CCGGAGGCAG AGCTTGCCTC GGCCCTTGTT 
GCTTCGCAGG ATACGCTGAT GTCCCTCGCA TGCGTGATGA TGGAGAGCTA CCGGTGCAGC 
AGTACGGAGC AGCTGGTACG CAGTGGCTAT TACGCACTTC TGCTAGGCGC ACTCTCGTTG 
GTGCCTGTTG CCGAAGAAGA AGGTAGCACC ACGTTGCGTG TGCCCGTGAT GACGGCTGTG 
GCTAGGGTGT CGGATGGCCA TTCCGTTGGG CTTACGGCGG GCCACCAACC CATGCGCATT 
GTTGTCGCCA TCATTCAAGA GTTCCTCTTG TTTCAGAGCT CGGCGGGGAC GCTGACAAAG 
GAGGCGGTGC TGGAGATGAA GGCGCTGGTG GACCGCATTC TCAGCAGCAA TCACATCGAC 
GTTGCTTCGC ACGGTGACCG CGGAACCACT ACTGCGGAAA CCATCACCGC GGTGTCGACG 
GACAAGGACG ACGACCTCGT TCTGGGCCAA CTGCTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_34_4080 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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