LINJ_36_1920 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_36_1920
Entrez Gene ID	5073878
Full Name	putative DEAD box RNA helicase
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001469737.1	XP_001469774.1	putative DEAD box RNA helicase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_36_1920 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_36_1920 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07075	XM_001469737.1 Latest version!	Leishmania infantum JPCM5 putative DEAD box RNA helicase partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_36_1920 ( XM_001469737.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001469774.1 Leishmania infantum JPCM5 putative DEAD box RNA helicase partial mRNA.

Price & Availability↑

CloneID	OLc07075
Clone ID Related Accession (Same CDS sequence)	XM_001469737.1
Accession Version	XM_001469737.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1977bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	putative DEAD box RNA helicase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009420). COMPLETENESS: incomplete on both ends.

ATGTCGGCGA GGGCACCTAC GTCGTTGTGG TTAGGGGACC ACAACGACAA GGCTGCAGTG 
GCTGCTGCGG AGCAGTCCAC AAAGAAGCGC CGCCGTCTTC GCCACCACCG ATGCAAGGCC 
GCACGGGAAG CTGCCTCAAA AACTGCCGAT GGACCGTACG ACGAGCTTGC TGAGACGGTG 
GAGAATAACG ATGAAGTGAA GTCAGTAGAG GAGACGCCGG AGGCGGCGTC TAACGTGGCG 
TCCACGAAAC GTTCGGAGAA GCGACGGCGT GAGGACGACA GCGACGACGA CGAAGAGGCG 
GACGCAGATG CGACGGCATC GAGCGCGCGT CCGTGTAACC CCCAAAAGCG CGGCGCGGCG 
GAGGGAGGGA AGACGTCATC CCCCTCCGCC TCCGCGTCCC CTGCTGCGTC GTCGTCGCCG 
AACGGCCCCA CAGCGGTAAG CATGACGCAG CGCAGCAAGG AGCTGGCCAA GTCCATCCCT 
GCCGTCACGG ACTACAAGTC ACTGCAGTTG AACCCCCACA TAGTGTCTGC TCTGGAGCAG 
GAGTTCAAGT TCAAGGAGCT GACGCCGATT CAGTCTCGCT GCATTCCTGC TGCGCTGCAG 
GGACGCGATC TCCTCGCCGA GGCGAAGACC GGCGCCGGTA AGACGCTGGC GTTTTTGATT 
CCAATTGTCG AGATCGTCTG CCGCTCTGGC TTCCGCCCCA GCAACGGCAC GGCAGCCATC 
ATCATCGGGC CCACCCGTGA GCTCTGCTTG CAGATCGAGG GTGTGCTGCT GAAGCTGCTG 
AAGCACTTCA ACGGCTCCTT GACGTTCTTG TGCTGCATTG GTGGCCAGAG CCGCAACCAA 
GAGGGCTTCA AGCTCGCCAA CGGCGTCATG ATCGTGGTCG CCTCCCCTGG CCGCCTGCTA 
GACCATTTGA AGTTGACGAC GGACTGGCAC ACAAAGAACC TACTGCTGCT CGCCGTTGAC 
GAGGCAGATC GCGTGCTCGA CAACGGCTTT GAGGAGGACA TGCGCGAGAT CGTGGCCCTG 
CTGCCCAAGA ACCGCCAGAC GTTCTTGTTT TCTGCCACGC AGACGACGCG TGTCGAGCAG 
CTCGCGCGCA TCTCGTTTCA CAAGACGCCG ATCTTCATCT CCATGAAGAG CAAGAAGGAC 
AAGGCCACCG TGGACACGTT GGAGCAGGGC TACGTCGTGT GCGCCAGCGA GCAGCGTCTG 
CTCGTGCTCT ACCACTTTGT GAAAAAGAAC CTGAAGAAGA AGGTCATCGT CTTCTTCAGC 
AGCCGCAACA GCGTCAGCTT CCACTGCGAG CTCTTCAACT ACATCGACGT TCCCTGCATC 
GCCTTCCACG GCAAGCAAAA GCAGCACCAG CGCTCCGCGA CGTACATGCA GTTTTGCAAC 
GCACCGAGTG GCGTGCTCTT CACAACCGAT GTCGCGGCAC GCGGTCTCGA CATTCCCGAG 
GTGGACTGGA TTGTGCAATT CGACCCCCCG GATGATCCGG TGAAGTACGT CCACCGTGTC 
GGGCGAACCG CGCGCGCTGG GCGCTGTGGT AACGCGCTCA TGTTTCTGCT TCCGCAGGAG 
GAACTGTTCC TCAAGTACCT CTACGATGAT GCCAAGGTGA AGGTGAACGA GTACACCTTT 
GATTTGACAA GGCTAAAAGG GAACGTGCAG GGGCAGCTGG AGCAGCTGGT GAGCTCCAAC 
TACTACCTGC GCACTTCGGC GCGGCAGGCA TACGAGGGCT ACTTGCTGAG CTACAGTAGC 
TGCCAGCTGA AAAACGTGTT CAACATCCAA AACCTCGACC TCGCTGCGGT GGCGCGCGGG 
TTTGCACTGA GTGAGCCGCC GCCGATCAAG ATGGACCTCT CCCAGTCTGC TGCACACATG 
AACAAGAAGT CGCGACACGA GTTTAGCGCC ATGCGCCACA CCAAGGACGC TAAGCGACGC 
GACGTGAACG CGAAGTCGAT GAACAAGCGG CATCAGAACA TCAGTGGGGA GTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001469774.1
CDS	1..1977
Translation	MSARAPTSLWLGDHNDKAAVAAAEQSTKKRRRLRHHRCKAAREAASKTADGPYDELAETVENNDEVKSVEETPEAASNVASTKRSEKRRREDDSDDDEEADADATASSARPCNPQKRGAAEGGKTSSPSASASPAASSSPNGPTAVSMTQRSKELAKSIPAVTDYKSLQLNPHIVSALEQEFKFKELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAIIIGPTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLDHLKLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNRQTFLFSATQTTRVEQLARISFHKTPIFISMKSKKDKATVDTLEQGYVVCASEQRLLVLYHFVKKNLKKKVIVFFSSRNSVSFHCELFNYIDVPCIAFHGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPEVDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVNEYTFDLTRLKGNVQGQLEQLVSSNYYLRTSARQAYEGYLLSYSSCQLKNVFNIQNLDLAAVARGFALSEPPPIKMDLSQSAAHMNKKSRHEFSAMRHTKDAKRRDVNAKSMNKRHQNISGEW

Target ORF information:

RefSeq Version	XM_001469737.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative DEAD box RNA helicase partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001469737.1

ORF Insert Sequence:

ATGTCGGCGA GGGCACCTAC GTCGTTGTGG TTAGGGGACC ACAACGACAA GGCTGCAGTG 
GCTGCTGCGG AGCAGTCCAC AAAGAAGCGC CGCCGTCTTC GCCACCACCG ATGCAAGGCC 
GCACGGGAAG CTGCCTCAAA AACTGCCGAT GGACCGTACG ACGAGCTTGC TGAGACGGTG 
GAGAATAACG ATGAAGTGAA GTCAGTAGAG GAGACGCCGG AGGCGGCGTC TAACGTGGCG 
TCCACGAAAC GTTCGGAGAA GCGACGGCGT GAGGACGACA GCGACGACGA CGAAGAGGCG 
GACGCAGATG CGACGGCATC GAGCGCGCGT CCGTGTAACC CCCAAAAGCG CGGCGCGGCG 
GAGGGAGGGA AGACGTCATC CCCCTCCGCC TCCGCGTCCC CTGCTGCGTC GTCGTCGCCG 
AACGGCCCCA CAGCGGTAAG CATGACGCAG CGCAGCAAGG AGCTGGCCAA GTCCATCCCT 
GCCGTCACGG ACTACAAGTC ACTGCAGTTG AACCCCCACA TAGTGTCTGC TCTGGAGCAG 
GAGTTCAAGT TCAAGGAGCT GACGCCGATT CAGTCTCGCT GCATTCCTGC TGCGCTGCAG 
GGACGCGATC TCCTCGCCGA GGCGAAGACC GGCGCCGGTA AGACGCTGGC GTTTTTGATT 
CCAATTGTCG AGATCGTCTG CCGCTCTGGC TTCCGCCCCA GCAACGGCAC GGCAGCCATC 
ATCATCGGGC CCACCCGTGA GCTCTGCTTG CAGATCGAGG GTGTGCTGCT GAAGCTGCTG 
AAGCACTTCA ACGGCTCCTT GACGTTCTTG TGCTGCATTG GTGGCCAGAG CCGCAACCAA 
GAGGGCTTCA AGCTCGCCAA CGGCGTCATG ATCGTGGTCG CCTCCCCTGG CCGCCTGCTA 
GACCATTTGA AGTTGACGAC GGACTGGCAC ACAAAGAACC TACTGCTGCT CGCCGTTGAC 
GAGGCAGATC GCGTGCTCGA CAACGGCTTT GAGGAGGACA TGCGCGAGAT CGTGGCCCTG 
CTGCCCAAGA ACCGCCAGAC GTTCTTGTTT TCTGCCACGC AGACGACGCG TGTCGAGCAG 
CTCGCGCGCA TCTCGTTTCA CAAGACGCCG ATCTTCATCT CCATGAAGAG CAAGAAGGAC 
AAGGCCACCG TGGACACGTT GGAGCAGGGC TACGTCGTGT GCGCCAGCGA GCAGCGTCTG 
CTCGTGCTCT ACCACTTTGT GAAAAAGAAC CTGAAGAAGA AGGTCATCGT CTTCTTCAGC 
AGCCGCAACA GCGTCAGCTT CCACTGCGAG CTCTTCAACT ACATCGACGT TCCCTGCATC 
GCCTTCCACG GCAAGCAAAA GCAGCACCAG CGCTCCGCGA CGTACATGCA GTTTTGCAAC 
GCACCGAGTG GCGTGCTCTT CACAACCGAT GTCGCGGCAC GCGGTCTCGA CATTCCCGAG 
GTGGACTGGA TTGTGCAATT CGACCCCCCG GATGATCCGG TGAAGTACGT CCACCGTGTC 
GGGCGAACCG CGCGCGCTGG GCGCTGTGGT AACGCGCTCA TGTTTCTGCT TCCGCAGGAG 
GAACTGTTCC TCAAGTACCT CTACGATGAT GCCAAGGTGA AGGTGAACGA GTACACCTTT 
GATTTGACAA GGCTAAAAGG GAACGTGCAG GGGCAGCTGG AGCAGCTGGT GAGCTCCAAC 
TACTACCTGC GCACTTCGGC GCGGCAGGCA TACGAGGGCT ACTTGCTGAG CTACAGTAGC 
TGCCAGCTGA AAAACGTGTT CAACATCCAA AACCTCGACC TCGCTGCGGT GGCGCGCGGG 
TTTGCACTGA GTGAGCCGCC GCCGATCAAG ATGGACCTCT CCCAGTCTGC TGCACACATG 
AACAAGAAGT CGCGACACGA GTTTAGCGCC ATGCGCCACA CCAAGGACGC TAAGCGACGC 
GACGTGAACG CGAAGTCGAT GAACAAGCGG CATCAGAACA TCAGTGGGGA GTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_36_1920 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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