Gene Symbol | Colec12 |
Entrez Gene ID | 140792 |
Full Name | collectin sub-family member 12 |
Synonyms | CL-P1,SRCL,Scara4 |
General protein information |
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Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Colec12 cDNA ORF clone
gRNAs
Gene Symbol | Colec12 |
Entrez Gene ID | 140792 |
Full Name | collectin sub-family member 12 |
Synonyms | CL-P1,SRCL,Scara4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_130449.2 | NP_569716.2 | collectin-12 |
XM_006525640.3 | XP_006525703.1 | collectin-12 isoform X1 |
Canis lupus familiaris (dog) | COLEC12 | XP_005623081.1 |
Bos taurus (cattle) | COLEC12 | NP_001095313.1 |
Pan troglodytes (chimpanzee) | COLEC12 | XP_524004.3 |
COLEC12 | XP_001088438.2 | |
Rattus norvegicus (Norway rat) | Colec12 | NP_001020892.1 |
Gallus gallus (chicken) | COLEC12 | NP_001034688.1 |
Danio rerio (zebrafish) | colec12 | NP_001116312.1 |
Xenopus tropicalis (tropical clawed frog) | colec12 | XP_002934169.1 |
Mus musculus (house mouse) | Colec12 | NP_569716.2 |
Homo sapiens (human) | COLEC12 | NP_569057.1 |
Scavenger receptor collectin placenta 1 is a novel receptor involved in the uptake of myelin by phagocytes.
Bogie JF, Mailleux J, Wouters E, Jorissen W, Grajchen E, Vanmol J, Wouters K, Hellings N, Van Horsen J, Vanmierlo T, Hendriks JJ
Scientific reports744794(2017 Mar)
Standardizing scavenger receptor nomenclature.
Prabhudas M, Bowdish D, Drickamer K, Febbraio M, Herz J, Kobzik L, Krieger M, Loike J, Means TK, Moestrup SK, Post S, Sawamura T, Silverstein S, Wang XY, El Khoury J
Journal of immunology (Baltimore, Md. : 1950)192(5)1997-2006(2014 Mar)
The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices.
Naba A, Clauser KR, Hoersch S, Liu H, Carr SA, Hynes RO
Molecular & cellular proteomics : MCP11(4)M111.014647(2012 Apr)
Scavenger receptor collectin placenta 1 (CL-P1) predominantly mediates zymosan phagocytosis by human vascular endothelial cells.
Jang S, Ohtani K, Fukuoh A, Yoshizaki T, Fukuda M, Motomura W, Mori K, Fukuzawa J, Kitamoto N, Yoshida I, Suzuki Y, Wakamiya N
The Journal of biological chemistry284(6)3956-65(2009 Feb)
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives.
Tamplin OJ, Kinzel D, Cox BJ, Bell CE, Rossant J, Lickert H
BMC genomics9511(2008 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
CL-P1 predominantly mediated phagocytosis for fungi in vascular endothelia.
Title: Scavenger receptor collectin placenta 1 (CL-P1) predominantly mediates zymosan phagocytosis by human vascular endothelial cells.
Structural analysis of carbohydrate-recognition domain of SRCL in complex with Lewis(x) and mutagenesis show the basis for this specificity, which is analogous to how selectins and DC-SIGN bind to related fucosylated glycans [scavenger receptor C]
Title: Scavenger receptor C-type lectin binds to the leukocyte cell surface glycan Lewis(x) by a novel mechanism.
The following Colec12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Colec12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu54389 | |
Clone ID Related Accession (Same CDS sequence) | XM_006525640.3 | |
Accession Version | XM_006525640.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | collectin-12 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006525640.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAATG TCACAGATGG CATGGAGACA TCTCACCAGA CTTATGACAA CAAACTCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006525703.1 |
CDS | 288..2324 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACAATG TCACAGATGG CATGGAGACA TCTCACCAGA CTTATGACAA CAAACTCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu21304 | |
Clone ID Related Accession (Same CDS sequence) | NM_130449.2 | |
Accession Version | NM_130449.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2229bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Mus musculus(house mouse) | |
Product | collectin-12 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK042772.1, AB078434.1 and AK141928.1. On Jan 18, 2008 this sequence version replaced NM_130449.1. ##Evidence-Data-START## Transcript exon combination :: AK141928.1, BC057936.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAAGACG ACTTTGCAGA GGAAGAGGAG GTGCAGTCCT TCGGTTACAA GAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_569716.2 |
CDS | 106..2334 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGACG ACTTTGCAGA GGAAGAGGAG GTGCAGTCCT TCGGTTACAA GAGGTTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Scavenger receptor collectin placenta 1 is a novel receptor involved in the uptake of myelin by phagocytes. |
Standardizing scavenger receptor nomenclature. |
The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices. |
Scavenger receptor collectin placenta 1 (CL-P1) predominantly mediates zymosan phagocytosis by human vascular endothelial cells. |
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. |