Gene Symbol | Nt5dc1 |
Entrez Gene ID | 319638 |
Full Name | 5'-nucleotidase domain containing 1 |
Synonyms | 6030401B09Rik,AW987726,Nt5c2l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Nt5dc1 cDNA ORF clone
gRNAs
Gene Symbol | Nt5dc1 |
Entrez Gene ID | 319638 |
Full Name | 5'-nucleotidase domain containing 1 |
Synonyms | 6030401B09Rik,AW987726,Nt5c2l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001347463.1 | NP_001334392.1 | 5'-nucleotidase domain-containing protein 1 isoform 2 |
XM_006512764.2 | XP_006512827.1 | 5'-nucleotidase domain-containing protein 1 isoform X2 |
NM_176968.5 | NP_795942.2 | 5'-nucleotidase domain-containing protein 1 isoform 1 |
XM_006512764.3 | XP_006512827.1 | 5'-nucleotidase domain-containing protein 1 isoform X1 |
Pan troglodytes (chimpanzee) | NT5DC1 | XP_518703.2 |
Gallus gallus (chicken) | NT5DC1 | XP_003641054.1 |
NT5DC1 | XP_001112048.1 | |
Danio rerio (zebrafish) | nt5dc1 | NP_001098413.1 |
Drosophila melanogaster (fruit fly) | CG2277 | NP_001261248.1 |
Canis lupus familiaris (dog) | NT5DC1 | XP_532271.2 |
Bos taurus (cattle) | NT5DC1 | NP_001098955.1 |
Rattus norvegicus (Norway rat) | Nt5dc1 | NP_001099863.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001319 | XP_321827.5 |
Homo sapiens (human) | NT5DC1 | NP_689942.2 |
Mus musculus (house mouse) | Nt5dc1 | NP_795942.2 |
Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning.
Bitto E, Bingman CA, Wesenberg GE, McCoy JG, Phillips GN Jr
The Journal of biological chemistry281(29)20521-9(2006 Jul)
Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Piao Y, Ko NT, Lim MK, Ko MS
Genome research11(9)1553-8(2001 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Inhibited by lead which binds at the active site and my inhibit lead poisoning.
Title: Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning.
The following Nt5dc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Nt5dc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu05800 | |
Clone ID Related Accession (Same CDS sequence) | NM_176968.5 | |
Accession Version | NM_176968.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-24 | |
Organism | Mus musculus(house mouse) | |
Product | 5'-nucleotidase domain-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB618670.1, AK145666.1 and BC098476.1. On Nov 29, 2016 this sequence version replaced NM_176968.4. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK145666.1, AK077876.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164134, SAMN01164143 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_795942.2 |
CDS | 99..1502 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu43895 | |
Clone ID Related Accession (Same CDS sequence) | XM_006512764.2 , XM_006512764.3 | |
Accession Version | XM_006512764.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | 5'-nucleotidase domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000076.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006512764.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006512827.1 |
CDS | 137..742 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83536 | |
Clone ID Related Accession (Same CDS sequence) | NM_001347463.1 | |
Accession Version | NM_001347463.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 729bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-28 | |
Organism | Mus musculus(house mouse) | |
Product | 5'-nucleotidase domain-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB618670.1, AK049656.1 and BC098476.1. On Nov 29, 2016 this sequence version replaced XM_017313964.1. Transcript Variant: This variant (2) lacks an exon in the 5' coding region compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning results in translation initiation at the downstream start codon to encode an isoform (2) that has a shorter N-terminus, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK049656.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTTGATAA CTAGTTCTCA CAGTGATTAC TGTAAACTTC TTGGCAGTTA CATCCTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001334392.1 |
CDS | 689..1417 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTGATAA CTAGTTCTCA CAGTGATTAC TGTAAACTTC TTGGCAGTTA CATCCTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu43895 | |
Clone ID Related Accession (Same CDS sequence) | XM_006512764.2 , XM_006512764.3 | |
Accession Version | XM_006512764.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | 5'-nucleotidase domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000076.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006512764.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006512827.1 |
CDS | 137..742 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCAGC ACTTCTCCCT GGGCGCCTGC GACGTGGTCG GCTTCGATCT CGACCACACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning. |
Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. |