Gene Symbol | ANKRD33B |
Entrez Gene ID | 67434 |
Full Name | ankyrin repeat domain 33B |
Synonyms | 0610012A05Rik,3021401C12Rik,5730557B15Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » ANKRD33B cDNA ORF clone
gRNAs
Gene Symbol | ANKRD33B |
Entrez Gene ID | 67434 |
Full Name | ankyrin repeat domain 33B |
Synonyms | 0610012A05Rik,3021401C12Rik,5730557B15Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001357923.1 | NP_001344852.1 | ankyrin repeat domain-containing protein 33B isoform 5 |
NM_026153.3 | NP_080429.1 | ankyrin repeat domain-containing protein 33B isoform 1 |
NM_027496.3 | NP_081772.1 | ankyrin repeat domain-containing protein 33B isoform 2 |
XM_006520155.3 | XP_006520218.1 | ankyrin repeat domain-containing protein 33B isoform X2 |
NM_001164441.1 | NP_001157913.1 | ankyrin repeat domain-containing protein 33B isoform 3 |
XM_006520155.4 | XP_006520218.1 | ankyrin repeat domain-containing protein 33B isoform X1 |
NM_001357922.1 | NP_001344851.1 | ankyrin repeat domain-containing protein 33B isoform 4 |
XM_006520154.3 | XP_006520217.1 | ankyrin repeat domain-containing protein 33B isoform X1 |
Canis lupus familiaris (dog) | ANKRD33B | XP_545172.3 |
Danio rerio (zebrafish) | ankrd33bb | XP_001919612.1 |
Pan troglodytes (chimpanzee) | ANKRD33B | XP_526834.3 |
Gallus gallus (chicken) | ANKRD33B | XP_004935171.1 |
Homo sapiens (human) | ANKRD33B | NP_001157912.1 |
ANKRD33B | XP_001086061.1 | |
Bos taurus (cattle) | ANKRD33B | NP_001192776.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494504 | XP_002938365.2 |
Mus musculus (house mouse) | Ankrd33b | NP_001157913.1 |
Rattus norvegicus (Norway rat) | Ankrd33b | NP_001178494.1 |
Danio rerio (zebrafish) | ankrd33ba | XP_696682.1 |
Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord.
Tamplin OJ, Cox BJ, Rossant J
Developmental biology360(2)415-25(2011 Dec)
Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)
Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl.
Yoshida S, Mears AJ, Friedman JS, Carter T, He S, Oh E, Jing Y, Farjo R, Fleury G, Barlow C, Hero AO, Swaroop A
Human molecular genetics13(14)1487-503(2004 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ANKRD33B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ANKRD33B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu01694 | |
Clone ID Related Accession (Same CDS sequence) | NM_026153.3 | |
Accession Version | NM_026153.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC100327.1, AK012871.1 and AC123917.25. On Aug 26, 2009 this sequence version replaced NM_026153.2. Transcript Variant: This variant (1) uses an alternate splice pattern in the 3' coding region and 3' UTR, compared to variant 3. The resulting isoform (1) has a shorter and distinct C-terminus, compared to isoform 3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK002572.1, AK012871.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849383 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080429.1 |
CDS | 368..754 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04291 | |
Clone ID Related Accession (Same CDS sequence) | NM_027496.3 | |
Accession Version | NM_027496.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1434bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC100327.1, AK017844.1 and AC123917.25. On Aug 26, 2009 this sequence version replaced NM_027496.2. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 3. The resulting isoform (2) lacks an internal segment near the N-terminus, compared to isoform 3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK017844.1, BY717635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849385, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081772.1 |
CDS | 368..1801 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu09808 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164441.1 | |
Accession Version | NM_001164441.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1461bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC115735.8 and AC123917.25. Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK156757.1, FO714332.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001157913.1 |
CDS | 368..1828 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu50753 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357922.1 , XM_006520154.3 | |
Accession Version | NM_001357922.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-29 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC115735.8 and AC123917.25. On Nov 10, 2017 this sequence version replaced XM_006520154.3. Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 5' coding region and uses a downstream start codon compared to variant 1. It encodes isoform 4 which has a shorter N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC100327.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849383, SAMN00849384 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAAGCGG CCATGCAGGG CAGAACGGAA TGTGTGCGAG CCCTTATGAT GGCAGGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001344851.1 |
CDS | 808..1698 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CCATGCAGGG CAGAACGGAA TGTGTGCGAG CCCTTATGAT GGCAGGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu50753 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357922.1 , XM_006520154.3 | |
Accession Version | XM_006520154.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006520154.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CCATGCAGGG CAGAACGGAA TGTGTGCGAG CCCTTATGAT GGCAGGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006520217.1 |
CDS | 808..1698 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CCATGCAGGG CAGAACGGAA TGTGTGCGAG CCCTTATGAT GGCAGGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu50754 | |
Clone ID Related Accession (Same CDS sequence) | XM_006520155.3 , XM_006520155.4 | |
Accession Version | XM_006520155.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 528bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006520155.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006520218.1 |
CDS | 702..1229 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83757 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357923.1 | |
Accession Version | NM_001357923.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1047bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-29 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC115735.8 and AC123917.25. Transcript Variant: This variant (5) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 5, which is shorter than isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK089667.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCAAGGG AGGCCAGAAG AGGGCGCTGG ATCCTTTGGA GCTGCAGTTA CTTGATGGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001344852.1 |
CDS | 879..1925 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCAAGGG AGGCCAGAAG AGGGCGCTGG ATCCTTTGGA GCTGCAGTTA CTTGATGGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu50754 | |
Clone ID Related Accession (Same CDS sequence) | XM_006520155.3 , XM_006520155.4 | |
Accession Version | XM_006520155.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 528bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 33B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006520155.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006520218.1 |
CDS | 411..938 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGCTGC TGGCTGGGCC CGGGCCGGAG GGCGGCGGGA CACGCTGCTT GTCCCCGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord. |
Genomic analysis of mouse retinal development. |
Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl. |