Gene Symbol | Mtpap |
Entrez Gene ID | 67440 |
Full Name | mitochondrial poly(A) polymerase |
Synonyms | 0610027A18Rik,AW551379,Papd1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Mtpap cDNA ORF clone
gRNAs
Gene Symbol | Mtpap |
Entrez Gene ID | 67440 |
Full Name | mitochondrial poly(A) polymerase |
Synonyms | 0610027A18Rik,AW551379,Papd1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006526182.3 | XP_006526245.1 | poly(A) RNA polymerase, mitochondrial isoform X1 |
NM_026157.2 | NP_080433.1 | poly(A) RNA polymerase, mitochondrial precursor |
NM_001361009.1 | NP_001347938.1 | poly(A) RNA polymerase, mitochondrial isoform 2 |
XM_006526183.3 | XP_006526246.1 | poly(A) RNA polymerase, mitochondrial isoform X1 |
XM_006526184.3 | XP_006526247.1 | poly(A) RNA polymerase, mitochondrial isoform X1 |
NM_026157.3 | NP_080433.1 | poly(A) RNA polymerase, mitochondrial isoform 1 precursor |
NM_001361008.1 | NP_001347937.1 | poly(A) RNA polymerase, mitochondrial isoform 2 |
XM_006526184.4 | XP_006526247.1 | poly(A) RNA polymerase, mitochondrial isoform X1 |
Homo sapiens (human) | MTPAP | NP_060579.3 |
Canis lupus familiaris (dog) | MTPAP | XP_535150.2 |
Mus musculus (house mouse) | Mtpap | NP_080433.1 |
Rattus norvegicus (Norway rat) | Mtpap | NP_001100829.1 |
Danio rerio (zebrafish) | LOC563801 | XP_692256.4 |
Bos taurus (cattle) | MTPAP | XP_002692192.2 |
Drosophila melanogaster (fruit fly) | CG11418 | NP_001259129.1 |
Xenopus tropicalis (tropical clawed frog) | mtpap | XP_002940378.2 |
Pan troglodytes (chimpanzee) | MTPAP | XP_001136690.1 |
MTPAP | XP_001083177.1 | |
Gallus gallus (chicken) | MTPAP | XP_418580.4 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003293 | XP_319519.4 |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, N?rnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Doll? P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS biology9(1)e1000582(2011 Jan)
A mitochondrial protein compendium elucidates complex I disease biology.
Pagliarini DJ, Calvo SE, Chang B, Sheth SA, Vafai SB, Ong SE, Walford GA, Sugiana C, Boneh A, Chen WK, Hill DE, Vidal M, Evans JG, Thorburn DR, Carr SA, Mootha VK
Cell134(1)112-23(2008 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Mtpap gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Mtpap cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | NM_001361009.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC138768.3. On Feb 24, 2018 this sequence version replaced XM_006526183.3. Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region and uses a downstream start codon compared to variant 1. It encodes isoform 2 which has a shorter N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK166038.1, AK002680.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001347938.1 |
CDS | 756..1769 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | NM_001361008.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC138768.3. On Feb 24, 2018 this sequence version replaced XM_006526182.3. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region and uses a downstream start codon compared to variant 1. It encodes isoform 2 which has a shorter N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.193038.1, AK036760.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001347937.1 |
CDS | 779..1792 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | XM_006526182.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006526182.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006526245.1 |
CDS | 779..1792 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | XM_006526183.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006526183.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006526246.1 |
CDS | 752..1765 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | XM_006526184.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006526184.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006526247.1 |
CDS | 735..1748 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu54742 | |
Clone ID Related Accession (Same CDS sequence) | XM_006526182.3 , NM_001361009.1 , XM_006526183.3 , XM_006526184.3 , NM_001361008.1 , XM_006526184.4 | |
Accession Version | XM_006526184.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006526184.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006526247.1 |
CDS | 763..1776 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTAG ATCTAGATGA AACTGGAAAA CTTGATGTTC ACAAGAATAC AGGGAATTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu20737 | |
Clone ID Related Accession (Same CDS sequence) | NM_026157.2 , NM_026157.3 | |
Accession Version | NM_026157.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1758bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-19 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK011546.1, AK135537.1 and AK030697.1. On Nov 10, 2006 this sequence version replaced NM_026157.1. ##Evidence-Data-START## Transcript exon combination :: AK135537.1, AK011546.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## |
1 | ATGGCTGCTC GCGGCGTGGG GTTATTGACC CGTTTGCCCG TGTGTTCCCA GAGACGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080433.1 |
CDS | 31..1788 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTC GCGGCGTGGG GTTATTGACC CGTTTGCCCG TGTGTTCCCA GAGACGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu20737 | |
Clone ID Related Accession (Same CDS sequence) | NM_026157.2 , NM_026157.3 | |
Accession Version | NM_026157.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1758bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-26 | |
Organism | Mus musculus(house mouse) | |
Product | poly(A) RNA polymerase, mitochondrial isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC138768.3. On Feb 24, 2018 this sequence version replaced NM_026157.2. Transcript Variant: This variant (1) encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK135537.1, AK011546.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## |
1 | ATGGCTGCTC GCGGCGTGGG GTTATTGACC CGTTTGCCCG TGTGTTCCCA GAGACGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080433.1 |
CDS | 31..1788 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTC GCGGCGTGGG GTTATTGACC CGTTTGCCCG TGTGTTCCCA GAGACGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
A mitochondrial protein compendium elucidates complex I disease biology. |