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PCDHA2 cDNA ORF clone, Homo sapiens(human)

Summary

Gene Symbol PCDHA2
Entrez Gene ID 56146
Full Name protocadherin alpha 2
Synonyms PCDH-ALPHA2
General protein information
Preferred Names

protocadherin alpha 2

Names

protocadherin alpha-2
KIAA0345-like 12
Gene Type protein-coding
Organism Homo sapiens(human)
Genome

5

5q31.3
Summary This gene is a member of the protocadherin alpha gene cluster, one of three related gene clusters tandemly linked on chromosome five that demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The alpha gene cluster is composed of 15 cadherin superfamily genes related to the mouse CNR genes and consists of 13 highly similar and 2 more distantly related coding sequences. The tandem array of 15 N-terminal exons, or variable exons, are followed by downstream C-terminal exons, or constant exons, which are shared by all genes in the cluster. The large, uninterrupted N-terminal exons each encode six cadherin ectodomains while the C-terminal exons encode the cytoplasmic domain. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been observed and additional variants have been suggested but their full-length nature has yet to be determined. [provided by RefSeq, Jul 2008].
Disorder MIM:

606308


Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_031496.1 NP_113684.1 protocadherin alpha-2 isoform 3 precursor
NM_018905.2 NP_061728.1 protocadherin alpha-2 isoform 1 precursor
NM_031495.2 NP_113683.1 protocadherin alpha-2 isoform 2 precursor
NM_031496.2 NP_113684.1 protocadherin alpha-2 isoform 3 precursor
NM_031495.1 NP_113683.1 protocadherin alpha-2 isoform 2 precursor
NM_018905.3 NP_061728.1 protocadherin alpha-2 isoform 1 precursor

Pathways from BioSystems


Homologies


LOC698874 XP_002804600.1
Gallus gallus (chicken) PCDHA7 NP_001104607.1
Gallus gallus (chicken) PCDHA9 NP_001104609.1
Gallus gallus (chicken) PCDHA3 NP_001104603.1
Homo sapiens (human) PCDHA2 NP_061728.1
Pan troglodytes (chimpanzee) PCDHA2 NP_001076052.1
Mus musculus (house mouse) Pcdha2 NP_932785.1
Gallus gallus (chicken) PCDHA11 NP_001104598.1
Gallus gallus (chicken) PCDHA4 NP_001104604.1
Gallus gallus (chicken) PCDHA12 NP_001104599.1
Rattus norvegicus (Norway rat) Pcdha2 NP_955798.1
Gallus gallus (chicken) PCDHA2 NP_001104602.1
Gallus gallus (chicken) PCDHA6 NP_001104606.1

Gene Ontology


Bibliography

Related articles in PubMed

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Fox CS, Liu Y, White CC, Feitosa M, Smith AV, Heard-Costa N, Lohman K, , , , Johnson AD, Foster MC, Greenawalt DM, Griffin P, Ding J, Newman AB, Tylavsky F, Miljkovic I, Kritchevsky SB, Launer L, Garcia M, Eiriksdottir G, Carr JJ, Gudnason V, Harris TB, Cupples LA, Borecki IB
PLoS genetics8(5)e1002695(2012)

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.
Wu C, Ma MH, Brown KR, Geisler M, Li L, Tzeng E, Jia CY, Jurisica I, Li SS
Proteomics7(11)1775-85(2007 Jun)

Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.
Gevaert K, Goethals M, Martens L, Van Damme J, Staes A, Thomas GR, Vandekerckhove J
Nature biotechnology21(5)566-9(2003 May)

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.
Wu Q, Zhang T, Cheng JF, Kim Y, Grimwood J, Schmutz J, Dickson M, Noonan JP, Zhang MQ, Myers RM, Maniatis T
Genome research11(3)389-404(2001 Mar)

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.
Nollet F, Kools P, van Roy F
Journal of molecular biology299(3)551-72(2000 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Provides evidence for a 22 aa signal peptide.
Title: Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.

The following PCDHA2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PCDHA2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHu29353 NM_031496.2
Latest version!		 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $391.30
$559.00
OHu00408 NM_031495.2
Latest version!		 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $580.30
$829.00
OHu03143 NM_018905.3
Latest version!		 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $475.30
$679.00
View Old Accession Versions >>
OHu29353 NM_031496.1 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $391.30
$559.00
OHu00408 NM_031495.1 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $580.30
$829.00
OHu03143 NM_018905.2 Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $475.30
$679.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OHu29353
Clone ID Related Accession (Same CDS sequence) NM_031496.1 , NM_031496.2
Accession Version NM_031496.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2427bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-15
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 3 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BC003126.1. On or before Aug 31, 2013 this sequence version replaced XM_005268491.1, XM_005278372.1. Transcript Variant: This variant (3) splices the large, first exon into a unique exon contained within the intron between PCDHA3 and PCDHA4. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC003126.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGAT ATGGAACTTC 
AATCTTCAAA TCCAGCTTGC CTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_113684.1
CDS107..2533
Translation

Target ORF information:

RefSeq Version NM_031496.1
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_031496.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGAT ATGGAACTTC 
AATCTTCAAA TCCAGCTTGC CTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu29353
Clone ID Related Accession (Same CDS sequence) NM_031496.1 , NM_031496.2
Accession Version NM_031496.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2427bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-07-06
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 3 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC005609.1 and BC003126.1. On May 31, 2019 this sequence version replaced NM_031496.1. Transcript Variant: This variant (3) splices the large, first exon into a unique exon contained within the intron between PCDHA3 and PCDHA4. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC003126.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGAT ATGGAACTTC 
AATCTTCAAA TCCAGCTTGC CTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_113684.1
CDS114..2540
Translation

Target ORF information:

RefSeq Version NM_031496.2
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_031496.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGAT ATGGAACTTC 
AATCTTCAAA TCCAGCTTGC CTCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu00408
Clone ID Related Accession (Same CDS sequence) NM_031495.2 , NM_031495.1
Accession Version NM_031495.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2475bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-07-06
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 2 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC005609.1, BC003126.1 and AF152480.1. On Jun 1, 2019 this sequence version replaced NM_031495.1. Transcript Variant: This variant (2) utilizes the large, first exon then continues into the downstream intron 1 sequence before terminating. This one-exon transcript encodes a shorter isoform (2), compared to isoform 1. This short variant is represented based on data in PMID:10380929. ##Evidence-Data-START## Transcript is intronless :: AF152480.1, SRR1803611.86205.1 [ECO:0000345] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGGT GAGTCTTTTA 
CTTTTTCTTG CCAATTCTAA AATTGTTCTT TTTAAAAAAT TCTATATGAT TTCTACTAGT 
TATTTAGATT CATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_113683.1
CDS114..2588
Translation

Target ORF information:

RefSeq Version NM_031495.2
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_031495.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGGT GAGTCTTTTA 
CTTTTTCTTG CCAATTCTAA AATTGTTCTT TTTAAAAAAT TCTATATGAT TTCTACTAGT 
TATTTAGATT CATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu00408
Clone ID Related Accession (Same CDS sequence) NM_031495.2 , NM_031495.1
Accession Version NM_031495.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2475bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-15
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 2 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BC003126.1 and AF152480.1. Transcript Variant: This variant (2) utilizes the large, first exon then continues into the downstream intron 1 sequence before terminating. This one-exon transcript encodes a shorter isoform (2), compared to isoform 1. This short variant is represented based on data in PMID:10380929. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGGT GAGTCTTTTA 
CTTTTTCTTG CCAATTCTAA AATTGTTCTT TTTAAAAAAT TCTATATGAT TTCTACTAGT 
TATTTAGATT CATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_113683.1
CDS107..2581
Translation

Target ORF information:

RefSeq Version NM_031495.1
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_031495.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGGT GAGTCTTTTA 
CTTTTTCTTG CCAATTCTAA AATTGTTCTT TTTAAAAAAT TCTATATGAT TTCTACTAGT 
TATTTAGATT CATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu03143
Clone ID Related Accession (Same CDS sequence) NM_018905.2 , NM_018905.3
Accession Version NM_018905.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2847bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-09-30
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 1 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BC003126.1 and AF152310.1. This sequence is a reference standard in the RefSeqGene project. On May 22, 2001 this sequence version replaced NM_018905.1. Transcript Variant: This variant (1) includes the constant region exons and encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: AF152310.1, SRR1660809.11757.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2142670, SAMEA2144333 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGCC ACGACAGCCC 
AACCCTGACT GGCGTTACTC TGCCTCCCTG AGAGCAGGCA TGCACAGCTC TGTGCACCTA 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC AGAGGCAGGA GAAGTGTCCC CTCCAGTCGG TGCGGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAATC CGGTCCCGGT 
GAGTTGCCCG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTACTAACA GCCAAATTGA CAAAAGTGAC TTCATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACTG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_061728.1
CDS107..2953
Translation

Target ORF information:

RefSeq Version NM_018905.2
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_018905.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGCC ACGACAGCCC 
AACCCTGACT GGCGTTACTC TGCCTCCCTG AGAGCAGGCA TGCACAGCTC TGTGCACCTA 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC AGAGGCAGGA GAAGTGTCCC CTCCAGTCGG TGCGGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAATC CGGTCCCGGT 
GAGTTGCCCG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTACTAACA GCCAAATTGA CAAAAGTGAC TTCATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACTG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu03143
Clone ID Related Accession (Same CDS sequence) NM_018905.2 , NM_018905.3
Accession Version NM_018905.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2847bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-21
Organism Homo sapiens(human)
Product protocadherin alpha-2 isoform 1 precursor
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC005609.1, BC003126.1, AF152310.1 and AC010223.6. This sequence is a reference standard in the RefSeqGene project. On Nov 23, 2018 this sequence version replaced NM_018905.2. Transcript Variant: This variant (1) includes the constant region exons and encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: SRR1660809.156560.1, AF152310.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2142670, SAMEA2144333 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000526136.2/ ENSP00000431748.1 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGCC ACGACAGCCC 
AACCCTGACT GGCGTTACTC TGCCTCCCTG AGAGCAGGCA TGCACAGCTC TGTGCACCTA 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC AGAGGCAGGA GAAGTGTCCC CTCCAGTCGG TGCGGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAATC CGGTCCCGGT 
GAGTTGCCCG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTACTAACA GCCAAATTGA CAAAAGTGAC TTCATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACTG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_061728.1
CDS114..2960
Translation

Target ORF information:

RefSeq Version NM_018905.3
Organism Homo sapiens(human)
Definition Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_018905.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
ATGGCGTCTT CTATCAGAAG GGGCCGAGGG GCCTGGACAC GGCTGCTCTC GCTTCTGCTC 
CTCGCAGCCT GGGAGGTGGG GAGCGGCCAG CTCCGCTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGA GGAGCTGGTG 
CCGCGCCTGT TCCGGGTGGC GTCCAAAAGA CACGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAATGTAGCA TCCACGTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGGAA 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCAATATTTC CAATGACAGT AAAGACTATC 
CGGTTTCCCG AATCAAGGCT GCTTGATTCT CGGTTTCCTC TAGAGGGAGC ATCTGATGCA 
GATATAGGAG TAAATGCTCT TCTCTCCTAC AAGCTCAGCT CCAGTGAGTT TTTCTTCCTA 
GATATACAGG CAAATGATGA ACTAAGCGAA TCTTTGTCTC TCGTGCTGGG GAAATCGCTG 
GACAGAGAGG AAACTGCTGA GGTTAATTTG TTACTGGTGG CTACTGATGG GGGCAAACCT 
GAGCTCACGG GCACCGTTCA AATACTTATT AAGGTATTAG ATGTAAATGA CAATGAACCA 
ACTTTTGCCC AATCAGTTTA CAAAGTAAAA TTGTTAGAGA ATACGGCAAA TGGGACCTTA 
GTGGTTAAGT TAAACGCTTC TGATGCAGAT GAAGGACCGA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCCTC CACTATACAG ACTAAGTTTA CCATAGATCC CATCTCAGGG 
GAAATCAGAA CTAAGGGAAA ATTAGATTAT GAAGAAGCAA AGTCCTACGA GATTCAGGTC 
ACTGCAACTG ACAAAGGAAC CCCTTCAATG TCAGGACATT GTAAAATTTC ATTAAAACTT 
GTGGACATCA ATGATAACAC ACCAGAAGTC TCAATAACGT CTCTCTCACT TCCCATCTCA 
GAGAACGCTT CCCTGGGCAC TGTCATTGCT CTCATCACGG TGTCGGATCG CGACTCTGGT 
ACGAATGGAC ATGTCACCTG CTCCCTGACG CCCCACGTCC CTTTCAAGCT GGTGTCCACC 
TTCAAGAATT ACTACTCGTT GGTGCTGGAC AGCGCCCTGG ACCGCGAGAG CGTGTCAGCC 
TATGAGCTGG TGGTGACCGC ACGGGACGGG GGCTCGCCTT CACTGTGGGC CACCACCAGC 
GTGTCCATCG AGGTGGCCGA CGTGAACGAC AACGCGCCGG CGTTCGCACA GCCTGAGTAC 
ACAGTATTCG TGAAGGAGAA CAACCCGCCG GGCTGCCACA TCTTCACGGT GTCAGCGTGG 
GATGCGGACG CGCAGGAGAA CGCGCTGGTG TCCTACTCGC TGGTGGAGCG GCGGGTGGGC 
GAGCGCGCGT TGTCGAGCTA CGTTTCGGTG CACGCGGAGA GCGGCAAGGT GTACGCGCTG 
CAGCCGCTGG ACCACGAGGA AGTGGAGCTG CTGCAGTTCC AGGTGAGCGC GCGGGATGCG 
GGCGTGCCGC CTCTGGGCAG CAACGTGACG CTGCAGGTGT TCGTGCTGGA CGAGAACGAC 
AACGCGCCGG CACTGTTGGC GCCTAGGGCT GGCACCGCTG CTGGCGCAGT GAGTGAGCTG 
GTGCCGTGGT CGGTGGGTGC AGGGCACGTG GTGGCGAAGG TGCGCGCAGT GGACGCTGAC 
TCAGGCTACA ACGCGTGGCT TTCGTACGAG CTTCAGCTGG GTACTGGCAG CGCTCGCATC 
CCGTTCCGCG TGGGGCTATA CACGGGTGAG ATCAGCACGA CACGTGCCCT AGACGAGGCT 
GACTCCCCTC GACACCGCCT ACTCGTGCTG GTGAAGGACC ACGGCGAACC AGCGTTGACA 
GCCACGGCCA CCGTGTTAGT GTCGTTGGTG GAAAGTGGCC AGGCACCCAA GGCCTCGTCG 
CGGGCGTGGG TGGGCGCCGC GGGCTCAGAG GCTACGCTGG TGGATGTCAA CGTGTACCTG 
ATCATCGCCA TCTGCGCGGT ATCCAGCCTG TTGGTGCTCA CGGTGCTGCT GTACACTGCG 
CTGCGGTGCT CGGTGCCACC CACCGAGGGT GCGCGCGCGC CAGGAAAGCC CACGCTGGTG 
TGCTCCAGCG CCGTGGGGAG CTGGTCTTAC TCGCAGCAGA GGCGGCAGAG GGTGTGCTCT 
GGGGAGGACC CCCCCAAGAC GGACCTCATG GCCTTCAGCC CTAGCTTATC TCAAGGTCCA 
GACTCCGCAG AAGAGAAACA GCTCTCAGAA TCAGAATACG TAGGAAAGCC ACGACAGCCC 
AACCCTGACT GGCGTTACTC TGCCTCCCTG AGAGCAGGCA TGCACAGCTC TGTGCACCTA 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC AGAGGCAGGA GAAGTGTCCC CTCCAGTCGG TGCGGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAATC CGGTCCCGGT 
GAGTTGCCCG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTACTAACA GCCAAATTGA CAAAAGTGAC TTCATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACTG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
PLoS genetics8(5)e1002695(2012)
Fox CS,Liu Y,White CC,Feitosa M,Smith AV,Heard-Costa N,Lohman K,,,,Johnson AD,Foster MC,Greenawalt DM,Griffin P,Ding J,Newman AB,Tylavsky F,Miljkovic I,Kritchevsky SB,Launer L,Garcia M,Eiriksdottir G,Carr JJ,Gudnason V,Harris TB,Cupples LA,Borecki IB


book

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.
Proteomics7(11)1775-85(2007 Jun)
Wu C,Ma MH,Brown KR,Geisler M,Li L,Tzeng E,Jia CY,Jurisica I,Li SS


book

Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.
Nature biotechnology21(5)566-9(2003 May)
Gevaert K,Goethals M,Martens L,Van Damme J,Staes A,Thomas GR,Vandekerckhove J


book

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.
Genome research11(3)389-404(2001 Mar)
Wu Q,Zhang T,Cheng JF,Kim Y,Grimwood J,Schmutz J,Dickson M,Noonan JP,Zhang MQ,Myers RM,Maniatis T


book

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.
Journal of molecular biology299(3)551-72(2000 Jun)
Nollet F,Kools P,van Roy F