Gene Symbol | SEC13 |
Entrez Gene ID | 460167 |
Full Name | SEC13 homolog, nuclear pore and COPII coat complex component |
Synonyms | SEC13L1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » SEC13 cDNA ORF clone
Gene Symbol | SEC13 |
Entrez Gene ID | 460167 |
Full Name | SEC13 homolog, nuclear pore and COPII coat complex component |
Synonyms | SEC13L1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016939876.1 | XP_016795365.1 | protein SEC13 homolog isoform X2 |
NM_001280268.1 | NP_001267197.1 | protein SEC13 homolog |
XM_016939875.1 | XP_016795364.1 | protein SEC13 homolog isoform X2 |
XM_016939877.1 | XP_016795366.1 | protein SEC13 homolog isoform X3 |
XM_024355196.1 | XP_024210964.1 | protein SEC13 homolog isoform X1 |
XM_024355197.1 | XP_024210965.1 | protein SEC13 homolog isoform X3 |
Pan troglodytes (chimpanzee) | SEC13 | XP_516277.3 |
Bos taurus (cattle) | SEC13 | NP_001069033.1 |
Rattus norvegicus (Norway rat) | Sec13 | NP_001006979.1 |
Danio rerio (zebrafish) | sec13 | NP_998500.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003183 | XP_312881.4 |
Caenorhabditis elegans (roundworm) | npp-20 | NP_500086.1 |
Eremothecium gossypii | AGOS_ACR199C | NP_983601.1 |
Arabidopsis thaliana (thale cress) | AT3G01340 | NP_186783.1 |
Mus musculus (house mouse) | Sec13 | NP_077168.2 |
Gallus gallus (chicken) | SEC13 | NP_001264770.1 |
Drosophila melanogaster (fruit fly) | sec13 | NP_651977.1 |
Arabidopsis thaliana (thale cress) | AT2G30050 | NP_180566.1 |
Xenopus tropicalis (tropical clawed frog) | sec13 | NP_988967.1 |
Homo sapiens (human) | SEC13 | NP_001129498.1 |
SEC13 | XP_001089862.2 | |
Saccharomyces cerevisiae (baker's yeast) | SEC13 | NP_013309.1 |
Kluyveromyces lactis | KLLA0C16643g | XP_452944.1 |
Schizosaccharomyces pombe (fission yeast) | sec13 | NP_596692.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_14666 | XP_003718375.1 |
Neurospora crassa | NCU04063 | XP_957678.2 |
Oryza sativa (rice) | Os02g0135800 | NP_001045820.1 |
Canis lupus familiaris (dog) | SEC13 | XP_850437.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SEC13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SEC13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00996 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280268.1 | |
Accession Version | NM_001280268.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-30 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305209.1. On or before Jul 22, 2013 this sequence version replaced XM_516277.4, XM_003309617.2. ##Evidence-Data-START## Transcript exon combination :: AK305209.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGGAAAA TGGTGTCAGT AATTAACACT GTGGATACCT CCCATGAGGA CATGATTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267197.1 |
CDS | 230..1207 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280268.1 |
1 | ATGGGGAAAA TGGTGTCAGT AATTAACACT GTGGATACCT CCCATGAGGA CATGATTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc104418 | |
Clone ID Related Accession (Same CDS sequence) | XM_024355196.1 | |
Accession Version | XM_024355196.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1023bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAGAAG CTGTGCTTAC TTGGGCTTGT GCTGGAAAAG ATGAAATGGG GAAAATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024210964.1 |
CDS | 588..1610 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024355196.1 |
1 | ATGAGAGAAG CTGTGCTTAC TTGGGCTTGT GCTGGAAAAG ATGAAATGGG GAAAATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc81076 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939875.1 | |
Accession Version | XM_016939875.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGTCAG TAATTAACAC TGTGGATACC TCCCATGAGG ACATGATTCA CGACGCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016795364.1 |
CDS | 132..1100 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016939875.1 |
1 | ATGGTGTCAG TAATTAACAC TGTGGATACC TCCCATGAGG ACATGATTCA CGACGCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc81077 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939876.1 , XM_016939877.1 , XM_024355197.1 | |
Accession Version | XM_016939876.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006490.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016795365.1 |
CDS | 235..1161 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016939876.1 |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc81077 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939876.1 , XM_016939877.1 , XM_024355197.1 | |
Accession Version | XM_016939877.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016795366.1 |
CDS | 234..1160 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016939877.1 |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc81077 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939876.1 , XM_016939877.1 , XM_024355197.1 | |
Accession Version | XM_024355197.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | protein SEC13 homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024210965.1 |
CDS | 596..1522 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024355197.1 |
1 | ATGATTCACG ACGCCCAGAT GGACTACTAT GGCACCCGCC TGGCAACCTG CTCATCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |