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Sft2d1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Sft2d1
Entrez Gene ID 292305
Full Name SFT2 domain containing 1
General protein information
Preferred Names

SFT2 domain containing 1

Names

vesicle transport protein SFT2A
SFT2 domain-containing protein 1
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

1

1q12

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001008302.1 NP_001008303.1 vesicle transport protein SFT2A

Pathways from BioSystems


Homologies


Drosophila melanogaster (fruit fly) CG5104 NP_649241.1
Homo sapiens (human) SFT2D1 NP_660152.1
Gallus gallus (chicken) SFT2D1 XP_001232143.1
Danio rerio (zebrafish) sft2d1 NP_956666.1
Arabidopsis thaliana (thale cress) AT5G24170 NP_197805.2
Xenopus tropicalis (tropical clawed frog) sft2d1 NP_001005146.2
Bos taurus (cattle) SFT2D1 NP_001029723.1
Rattus norvegicus (Norway rat) Sft2d1 NP_001008303.1
Pan troglodytes (chimpanzee) SFT2D1 XP_518851.2
Canis lupus familiaris (dog) SFT2D1 XP_533472.2
Mus musculus (house mouse) Sft2d1 NP_598875.2
Oryza sativa (rice) Os01g0219100 NP_001042417.2

Gene Ontology


Bibliography

Related articles in PubMed

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Sft2d1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sft2d1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa11232 NM_001008302.1
Latest version!		 Rattus norvegicus SFT2 domain containing 1 (Sft2d1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa11232
Clone ID Related Accession (Same CDS sequence) NM_001008302.1
Accession Version NM_001008302.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 480bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-16
Organism Rattus norvegicus(Norway rat)
Product vesicle transport protein SFT2A
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085346.1. On Dec 16, 2004 this sequence version replaced XM_214768.2. ##Evidence-Data-START## Transcript exon combination :: BC085346.1, CO387327.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
ATGGAGAAGC TACGGCGCGT CCTGAGCGGC CAAGACGACG AGGAGCAAGG CCTGACGGCA 
CAGGTCCTGG ATGCCTCATC CCTGAGTTTC AACACCAGGT TGAAGTGGTT TGTCATATGC 
TTTGTTGCTG GCATTTTCTT TTCAATCCTT GGAACTGGGT TGCTATGGCT TCCCAATGGC 
GTGAAGCTCT TTGCAGTATT TTATACCCTT GGAAACCTTG CTGCATTGGC CAGTACGTGC 
TTTTTAATGG GACCTGTGAA GCAACTGAAG AAAATGTTTG AAACAACAAG ATTGCTTGCA 
ACAATTATTA TGCTGTTGTG CCTGGTGTTT ACCCTGTGTG CTGCTCTCTG GTGGCGGAAG 
AAGGGGCTGG CCTTACTCTT CTGCATATTG CAGTTCTTGT CAATGACCTG GTATAGTCTG 
TCCTACATCC CGTATGCAAG GGACGCGGTG CTCAAGTGCT GCTCCTCCAT CCTGAGTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001008303.1
CDS66..545
Translation

Target ORF information:

RefSeq Version NM_001008302.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus SFT2 domain containing 1 (Sft2d1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001008302.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGAGAAGC TACGGCGCGT CCTGAGCGGC CAAGACGACG AGGAGCAAGG CCTGACGGCA 
CAGGTCCTGG ATGCCTCATC CCTGAGTTTC AACACCAGGT TGAAGTGGTT TGTCATATGC 
TTTGTTGCTG GCATTTTCTT TTCAATCCTT GGAACTGGGT TGCTATGGCT TCCCAATGGC 
GTGAAGCTCT TTGCAGTATT TTATACCCTT GGAAACCTTG CTGCATTGGC CAGTACGTGC 
TTTTTAATGG GACCTGTGAA GCAACTGAAG AAAATGTTTG AAACAACAAG ATTGCTTGCA 
ACAATTATTA TGCTGTTGTG CCTGGTGTTT ACCCTGTGTG CTGCTCTCTG GTGGCGGAAG 
AAGGGGCTGG CCTTACTCTT CTGCATATTG CAGTTCTTGT CAATGACCTG GTATAGTCTG 
TCCTACATCC CGTATGCAAG GGACGCGGTG CTCAAGTGCT GCTCCTCCAT CCTGAGTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Briefings in bioinformatics12(5)449-62(2011 Sep)
Gaudet P,Livstone MS,Lewis SE,Thomas PD