Gene Symbol | Sfswap |
Entrez Gene ID | 304431 |
Full Name | splicing factor SWAP |
Synonyms | Sfrs8,Srsf8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Sfswap cDNA ORF clone
Gene Symbol | Sfswap |
Entrez Gene ID | 304431 |
Full Name | splicing factor SWAP |
Synonyms | Sfrs8,Srsf8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006249270.3 | XP_006249332.1 | splicing factor, suppressor of white-apricot homolog isoform X4 |
XM_008769199.2 | XP_008767421.1 | splicing factor, suppressor of white-apricot homolog isoform X7 |
XM_006249269.3 | XP_006249331.1 | splicing factor, suppressor of white-apricot homolog isoform X2 |
XM_008769197.2 | XP_008767419.1 | splicing factor, suppressor of white-apricot homolog isoform X3 |
XM_006249271.3 | XP_006249333.1 | splicing factor, suppressor of white-apricot homolog isoform X5 |
XM_006249273.3 | XP_006249335.1 | splicing factor, suppressor of white-apricot homolog isoform X6 |
XM_008769196.2 | XP_008767418.1 | splicing factor, suppressor of white-apricot homolog isoform X1 |
NM_001034924.1 | NP_001030096.1 | splicing factor, suppressor of white-apricot homolog |
Mus musculus (house mouse) | Sfswap | NP_758480.2 |
Danio rerio (zebrafish) | sfswap | NP_957462.2 |
Canis lupus familiaris (dog) | SFSWAP | XP_534636.2 |
Bos taurus (cattle) | SFSWAP | NP_001179248.1 |
Rattus norvegicus (Norway rat) | Sfswap | NP_001030096.1 |
Homo sapiens (human) | SFSWAP | NP_004583.2 |
Xenopus tropicalis (tropical clawed frog) | sfswap | XP_004910608.1 |
Tau exon 10, whose missplicing causes frontotemporal dementia, is regulated by an intricate interplay of cis elements and trans factors.
Wang J, Gao QS, Wang Y, Lafyatis R, Stamm S, Andreadis A
Journal of neurochemistry88(5)1078-90(2004 Mar)
The mammalian homolog of suppressor-of-white-apricot regulates alternative mRNA splicing of CD45 exon 4 and fibronectin IIICS.
Sarkissian M, Winne A, Lafyatis R
The Journal of biological chemistry271(49)31106-14(1996 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sfswap gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sfswap cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa13722 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034924.1 | |
Accession Version | NM_001034924.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2376bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-10 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC105868.1. On Oct 21, 2005 this sequence version replaced XM_222111.3. ##Evidence-Data-START## Transcript exon combination :: BC105868.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAGAGAG AGGAAGAATA CAAAAGATTG AGTGAAGCGC TGGCGGAGGA TGGGAACTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001030096.1 |
CDS | 435..2810 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001034924.1 |
1 | ATGAAGAGAG AGGAAGAATA CAAAAGATTG AGTGAAGCGC TGGCGGAGGA TGGGAACTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34846 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249269.3 | |
Accession Version | XM_006249269.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2991bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249269.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249331.1 |
CDS | 154..3144 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249269.3 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34847 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249270.3 | |
Accession Version | XM_006249270.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2874bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249270.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249332.1 |
CDS | 154..3027 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249270.3 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34848 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249271.3 | |
Accession Version | XM_006249271.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2838bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249271.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249333.1 |
CDS | 154..2991 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249271.3 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34850 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249273.3 | |
Accession Version | XM_006249273.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2754bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249273.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249335.1 |
CDS | 154..2907 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249273.3 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46143 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769197.2 | |
Accession Version | XM_008769197.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2943bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769197.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767419.1 |
CDS | 155..3097 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769197.2 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46144 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769199.2 | |
Accession Version | XM_008769199.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2649bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769199.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAGAG AGGAAGAATA CAAAAGATTG AGTGAAGCGC TGGCGGAGGA TGGGAACTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767421.1 |
CDS | 485..3133 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769199.2 |
1 | ATGAAGAGAG AGGAAGAATA CAAAAGATTG AGTGAAGCGC TGGCGGAGGA TGGGAACTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46142 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769196.2 | |
Accession Version | XM_008769196.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3027bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | splicing factor, suppressor of white-apricot homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769196.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767418.1 |
CDS | 154..3180 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769196.2 |
1 | ATGTACGGTG CCGGCGGGGG CCGCGCCAAG GCGGAGAGGA AAGGCGGAGT GAAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Tau exon 10, whose missplicing causes frontotemporal dementia, is regulated by an intricate interplay of cis elements and trans factors. |
The mammalian homolog of suppressor-of-white-apricot regulates alternative mRNA splicing of CD45 exon 4 and fibronectin IIICS. |