Gene Symbol | Fchsd1 |
Entrez Gene ID | 307482 |
Full Name | FCH and double SH3 domains 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Fchsd1 cDNA ORF clone
Gene Symbol | Fchsd1 |
Entrez Gene ID | 307482 |
Full Name | FCH and double SH3 domains 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001109881.1 | NP_001103351.1 | F-BAR and double SH3 domains protein 1 isoform 1 |
NM_001107392.1 | NP_001100862.2 | F-BAR and double SH3 domains protein 1 isoform 2 |
XM_006254635.3 | XP_006254697.1 | F-BAR and double SH3 domains protein 1 isoform X1 |
NM_001109881.2 | NP_001103351.1 | F-BAR and double SH3 domains protein 1 |
Bos taurus (cattle) | FCHSD1 | NP_001193178.1 |
Gallus gallus (chicken) | FCHSD1 | XP_425188.4 |
Homo sapiens (human) | FCHSD1 | NP_258260.1 |
Rattus norvegicus (Norway rat) | Fchsd1 | NP_001103351.1 |
Pan troglodytes (chimpanzee) | FCHSD1 | XP_517998.4 |
Mus musculus (house mouse) | Fchsd1 | NP_783615.2 |
Xenopus tropicalis (tropical clawed frog) | fchsd1 | XP_002940037.2 |
Canis lupus familiaris (dog) | FCHSD1 | XP_005617364.1 |
Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck.
Becalska AN, Kelley CF, Berciu C, Stanishneva-Konovalova TB, Fu X, Wang S, Sokolova OS, Nicastro D, Rodal AA
Molecular biology of the cell24(15)2406-18(2013 Aug)
FCHSD1 and FCHSD2 are expressed in hair cell stereocilia and cuticular plate and regulate actin polymerization in vitro.
Cao H, Yin X, Cao Y, Jin Y, Wang S, Kong Y, Chen Y, Gao J, Heller S, Xu Z
PloS one8(2)e56516(2013)
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Fchsd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Fchsd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa05314 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107392.1 | |
Accession Version | NM_001107392.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1713bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-08-11 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | F-BAR and double SH3 domains protein 1 isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473974.1. On or before Oct 4, 2007 this sequence version replaced XM_001066113.1, XM_225999.4. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGCAGCG AGAGCGAGTG TGGGCCTTGG CACAGGAGAA GGCAGCCGAT GTCCAGGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100862.2 |
CDS | 579..2291 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107392.1 |
1 | ATGGGCAGCG AGAGCGAGTG TGGGCCTTGG CACAGGAGAA GGCAGCCGAT GTCCAGGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa00660 | |
Clone ID Related Accession (Same CDS sequence) | NM_001109881.1 , NM_001109881.2 | |
Accession Version | NM_001109881.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2073bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-08-11 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | F-BAR and double SH3 domains protein 1 isoform 1 | |
Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from CH473974.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103351.1 |
CDS | 45..2117 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001109881.1 |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa00660 | |
Clone ID Related Accession (Same CDS sequence) | NM_001109881.1 , NM_001109881.2 | |
Accession Version | NM_001109881.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2073bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | F-BAR and double SH3 domains protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07031738.1. On Jan 18, 2018 this sequence version replaced NM_001109881.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103351.1 |
CDS | 26..2098 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001109881.2 |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa38333 | |
Clone ID Related Accession (Same CDS sequence) | XM_006254635.3 | |
Accession Version | XM_006254635.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | F-BAR and double SH3 domains protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006254635.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006254697.1 |
CDS | 88..2154 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006254635.3 |
1 | ATGCAGCCGC CGCCCCGAAA AGTGAAGCCA GCCCAGGAGG TGAAACTTCG CTTTTTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck. |
FCHSD1 and FCHSD2 are expressed in hair cell stereocilia and cuticular plate and regulate actin polymerization in vitro. |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |