Gene Symbol | Fastkd1 |
Entrez Gene ID | 311112 |
Full Name | FAST kinase domains 1 |
Synonyms | RGD1563531 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Fastkd1 cDNA ORF clone
Gene Symbol | Fastkd1 |
Entrez Gene ID | 311112 |
Full Name | FAST kinase domains 1 |
Synonyms | RGD1563531 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001191738.1 | NP_001178667.1 | FAST kinase domain-containing protein 1, mitochondrial |
XM_017591689.1 | XP_017447178.1 | FAST kinase domain-containing protein 1, mitochondrial isoform X1 |
Homo sapiens (human) | FASTKD1 | NP_078898.3 |
Pan troglodytes (chimpanzee) | FASTKD1 | XP_515885.2 |
LOC706154 | XP_002808048.1 | |
Canis lupus familiaris (dog) | FASTKD1 | XP_005640459.1 |
Danio rerio (zebrafish) | fastkd1 | NP_991192.2 |
Mus musculus (house mouse) | Fastkd1 | NP_796218.2 |
Gallus gallus (chicken) | FASTKD1 | XP_004942825.1 |
Xenopus tropicalis (tropical clawed frog) | fastkd1 | NP_001039188.1 |
Bos taurus (cattle) | FASTKD1 | NP_001095501.1 |
Rattus norvegicus (Norway rat) | Fastkd1 | NP_001178667.1 |
FASTKD1 and FASTKD4 have opposite effects on expression of specific mitochondrial RNAs, depending upon their endonuclease-like RAP domain.
Boehm E, Zaganelli S, Maundrell K, Jourdain AA, Thore S, Martinou JC
Nucleic acids research45(10)6135-6146(2017 Jun)
Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells.
Han S, Udeshi ND, Deerinck TJ, Svinkina T, Ellisman MH, Carr SA, Ting AY
Cell chemical biology24(3)404-414(2017 Mar)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration.
Simarro M, Gimenez-Cassina A, Kedersha N, Lazaro JB, Adelmant GO, Marto JA, Rhee K, Tisdale S, Danial N, Benarafa C, Ordu?a A, Anderson P
Biochemical and biophysical research communications401(3)440-6(2010 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Fastkd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Fastkd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa07525 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191738.1 | |
Accession Version | NM_001191738.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2499bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-10 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FAST kinase domain-containing protein 1, mitochondrial | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07072867.1 and AABR07052473.1. On Jul 17, 2010 this sequence version replaced XM_230003.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01906353 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTCCGTC TACGAGGCGT CTCTCTACTC TCTTGGAGAG CGTTTCCGTT CCGCCCCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178667.1 |
CDS | 1005..3503 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191738.1 |
1 | ATGTTCCGTC TACGAGGCGT CTCTCTACTC TCTTGGAGAG CGTTTCCGTT CCGCCCCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25935 | |
Clone ID Related Accession (Same CDS sequence) | XM_017591689.1 | |
Accession Version | XM_017591689.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2025bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FAST kinase domain-containing protein 1, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAAAAA TAGCTGACAT TGTGAATAGG AAACTGGAAG CCATACAGGA CTTAAGGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017447178.1 |
CDS | 218..2242 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017591689.1 |
1 | ATGGGAAAAA TAGCTGACAT TGTGAATAGG AAACTGGAAG CCATACAGGA CTTAAGGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
FASTKD1 and FASTKD4 have opposite effects on expression of specific mitochondrial RNAs, depending upon their endonuclease-like RAP domain. |
Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells. |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration. |