Gene Symbol | Yipf6 |
Entrez Gene ID | 363476 |
Full Name | Yip1 domain family, member 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Yipf6 cDNA ORF clone
Gene Symbol | Yipf6 |
Entrez Gene ID | 363476 |
Full Name | Yip1 domain family, member 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006257077.3 | XP_006257139.1 | protein YIPF6 isoform X1 |
NM_001025747.1 | NP_001020918.1 | protein YIPF6 |
Homo sapiens (human) | YIPF6 | NP_776195.2 |
Canis lupus familiaris (dog) | YIPF6 | XP_549051.2 |
Danio rerio (zebrafish) | yipf6 | NP_001002096.1 |
Xenopus tropicalis (tropical clawed frog) | yipf6 | NP_001015932.1 |
Rattus norvegicus (Norway rat) | Yipf6 | NP_001020918.1 |
Gallus gallus (chicken) | YIPF6 | XP_420160.3 |
Drosophila melanogaster (fruit fly) | CG3652 | NP_608828.2 |
Bos taurus (cattle) | YIPF6 | NP_001094676.1 |
Mus musculus (house mouse) | Yipf6 | NP_997516.1 |
Oryza sativa (rice) | Os05g0437500 | NP_001055653.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008226 | XP_317244.3 |
Caenorhabditis elegans (roundworm) | W02D9.2 | NP_001251924.1 |
Schizosaccharomyces pombe (fission yeast) | SPAC644.13c | NP_593881.1 |
Arabidopsis thaliana (thale cress) | AT2G18840 | NP_565442.1 |
Pan troglodytes (chimpanzee) | YIPF6 | XP_521102.1 |
LOC713477 | XP_001102832.2 | |
Arabidopsis thaliana (thale cress) | AT4G30260 | NP_567843.1 |
Oryza sativa (rice) | Os01g0867700 | NP_001044915.1 |
YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi network-localized Yip domain family proteins, which play a role in the Golgi reassembly and glycan synthesis.
Soonthornsit J, Sakai N, Sasaki Y, Watanabe R, Osako S, Nakamura N
Experimental cell research353(2)100-108(2017 04)
Yip1 domain family, member 6 (Yipf6) mutation induces spontaneous intestinal inflammation in mice.
Brandl K, Tomisato W, Li X, Neppl C, Pirie E, Falk W, Xia Y, Moresco EM, Baccala R, Theofilopoulos AN, Schnabl B, Beutler B
Proceedings of the National Academy of Sciences of the United States of America109(31)12650-5(2012 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Yipf6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Yipf6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa07648 | |
Clone ID Related Accession (Same CDS sequence) | XM_006257077.3 , NM_001025747.1 | |
Accession Version | NM_001025747.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIPF6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097987.1. On Jul 22, 2005 this sequence version replaced XM_343795.2. ##Evidence-Data-START## Transcript exon combination :: BC097987.1, FQ103556.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGAAG CGGAGGACTC TCCTGGAGAG CAGGAGGCAA CGTCATCTAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020918.1 |
CDS | 6..716 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025747.1 |
1 | ATGGCGGAAG CGGAGGACTC TCCTGGAGAG CAGGAGGCAA CGTCATCTAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa07648 | |
Clone ID Related Accession (Same CDS sequence) | XM_006257077.3 , NM_001025747.1 | |
Accession Version | XM_006257077.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIPF6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005120.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006257077.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGAAG CGGAGGACTC TCCTGGAGAG CAGGAGGCAA CGTCATCTAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006257139.1 |
CDS | 174..884 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006257077.3 |
1 | ATGGCGGAAG CGGAGGACTC TCCTGGAGAG CAGGAGGCAA CGTCATCTAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi network-localized Yip domain family proteins, which play a role in the Golgi reassembly and glycan synthesis. |
Yip1 domain family, member 6 (Yipf6) mutation induces spontaneous intestinal inflammation in mice. |