ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_23561 cDNA ORF clone

THAPS_23561 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_23561 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_23561 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09038 XM_002295886.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $510.30
$729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_23561 ( XM_002295886.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295922.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09038
    Clone ID Related Accession (Same CDS sequence) XM_002295886.1
    Accession Version XM_002295886.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2916bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012070). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    ATGATGCAGA CAAGGGCAGC GTCGGTTGCT GCTGGAATTG CAGCTCTGAC AATCTGCGGC 
    TTCCCCACAT ACACATCTGC CAAACTAGCC GATCGAAGCA GAGTTCAAAA AGCACGGAAA 
    GGATCCAACA ATAATTATCG ACCAATTGAA GGACCTCGCT ACAGAAACAA TCGAAGCAAA 
    GACGCCAAAA GAGAGGGAGC TAGACTCGTT GCATCGTCAT CATCATCTGC TGCAACTGCA 
    CAACAACGAT CGAGCTCGGC ATCGTCGCCT GTGGGAGTTC GAGGTGCCAA AGTCTTGTCG 
    CAGAGTGACA ACTTCGACGT CAGAATGAAC ACAGACCCAG AATCATTCCG GCGTCATCTA 
    TCCTCTCAGC TCACGGGATG CTGCACCAAC TACATTTCCT ACTCGGCTGC CGATATGTGT 
    GCTCTCTATG GACAAGACTG TGAGACTGGA GAACAACCTT CACACGATTC TGGAGACGAA 
    GATTGTTCGC AGGCAGGTCT TTCCTTCATC GGAATTAGTT TTTCTGTGAA TACAGCTCTG 
    GGAAATCCTC TGTCTTATCA ACTGTGTGAT CAGTTTGCAA TGGAGAACAT TATTGATAGG 
    AACTATGACT ACGTTATGAG CATGGACGAG GACGGTTGGC TTGTTGGCGG AGGATATAAG 
    AGTTTTGACT ACTCTGGAAA GATGCCCTAC ATTGACTCGT CACACACTGA ATTGCTTCGC 
    ATTGGCAGTC TAGATCCTGA GTTCGGAGGA ACGTCTATTT CTCAAGTTTA TGATGCAATG 
    GACTCGCTCA ACTTTGCCCC ATTCTCTATC TTTCCCGAAT ACGTGAAAGG TGGAGGGGGA 
    CATCACTCGG GTGACGACGG TGACAAAGGC GTACCATCTT GTGATGTTAC TCTCATCGTC 
    AGTGTCGTAG ATACGTACGA AGACAATCAA TCTTACTCCA CATACGACGA GTTCTTGGAC 
    GATCTGTTTG ATGCATTGGA CGCTATGGGA GGTGGCCCTT GTATGGACGA TCATGATACG 
    GATCCTCACG TTTCAATGTC TCGTGGTGTC AAGTTCAAGA GTTCCTACCA CCAGCAACAG 
    TACTTTTACA AAGCCAACCT CGAGGTTGCC GTTTGGCAAG CAATGTACCC GAAGGGAGTT 
    GTTATCGGAA GCAAAGGCTA TGCATCGTTC CCACCGAACT CTGGTTCCAA AAACAGGATA 
    TATGTTGGAT ACGGGAACTT GTACTTCTTC TTTGACAGAG CAAACATTAC CAAAGCGTTC 
    ACACCTTACA GAGACCTCAC CGAGACGGAA TCTCACTACG CCACAATATA CTCCAGTGGT 
    CAATCTGATT CGTATTATGA ATCTACAACC AAAATTAGCT TCAACTACAA CAAAGGATCT 
    GGGTCACAAG ATAACAACCA GCAAGAATAT TACGAACACA ATCCGTACGG GTGGAATGCG 
    CAAATGGCAA AGCATGATAT GACAGATGGT TGGGATCTGC CGCCTAATTG CCAACAGGAA 
    GGCGAGACTT TCTTTGGGAT TCCTCTATCC AGAACATCTG ACTCAAAATT GCTGTCTACC 
    ACCAGTTTTC AGAATCAATT CGACTTTGAG TATCTGGTCG ATCGTAACTT CACCTACATG 
    CAAAAGTTTG GTACCAATCA TGGTTGGTTG GTGGGAGAAA CGCTTGACAA CGGTGCAGGA 
    TCTATCGTCG ACAAGGACAC TGCTCATATT CCCATCTTTT ACACGGGGTC AACAAATCCC 
    GAAATGGGAG GATTATCTTT GGAGAATCTA ATCAAAGTGG GAAAGAAGAT TGACTTTGGG 
    ACTCTGTACA TCAAACCAGC TTTTGTGTTC CAAGACGACG ATGGCAGTAT CAAGATGCAA 
    TTTGAAGCCG ATCCCAACTC TGCTCTCGGA TATCTTTACA GCAGTCTTTG TCAGATGATT 
    GGAATCTCAT GGAACTACGA CACTCCATAC AATGATCTTG GACTATACAC AAATTGTGCC 
    ATGCATGCAG CAGGCGATAG AGCCAAGTAT GGTTGTGGAC CAGAGAATGG TAGCAGTGGA 
    GGCTTCTGTC CTCAAATGAC GCTTGCCTAC CGAGTATCAT TTCAGTCTGA TGAACATGCT 
    GCTGCCTACC TCAATCGATG CAACAACTAT GTGGATTATT GGCGCAGCTT GTACCCATCT 
    GGAGTTGCCG TCGGAACTAC GTCATTCTGC CCAGACGGTG GCTGTCTCGC TCTCTTCTTG 
    AATCGTTACG ACGTCTTTTA CGTTTTCAAG CCCGACTTGG CAGGTTCGTG GGTCGAGTTC 
    ATGGGTGGAA CTGTTGCTCC GACAATATCA CCAGCACCAA CATACGAAGG AGGATGCGAC 
    AACCCTCACA ATTTGCACCT AGACTCTTGC TTTAGAAAAA AACACGTCCG TAAAGCCTCC 
    TCGGTCGCTT GGGATTCTCT TGGCACCGTT GGACAACTCT CGGTATTCCT TCTAGTCTTT 
    ATGGCATCGA CTCTCACGGT GTCAATCTTT CTCGCACGTG CCAAGCGGCG GCGTAGAGAC 
    GGAGAATCAT ATCTTGCGTT TCTATTTCGT GATATGCGAG GAAGCAAAAA GAAACGCAAG 
    AAGCTTCTAC GAAAGAGGAT GGGCAAAGGT ACGCTAGATG AAGATCTTCT GAGCGATGAC 
    GAAGGGTTCC GCAGTGTGCC TGCTCGCCCC GGAAGATCCG ATAGATCTGT CTACTCCAAA 
    TCATCAAGAC GTTCCAAACG TAGCAAGTCA AAATCTTCGA AGCGTAGCAA GTCAACAGAA 
    GATGAAGATG CCTCGATGAT TTCCGAGTCC AAATCTACTA GATCTCGTTC CAAGAGCAGA 
    ACCAGAGCTC GCTCTCGGTC GAGAAGTGCC AATCGGAATC TTCCTTCTAA AAAGTCGGAG 
    GACGAAGATG GACCCACAAG AAGGCAACTC GTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295922.1
    CDS1..2916
    Translation

    Target ORF information:

    RefSeq Version XM_002295886.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295886.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    ATGATGCAGA CAAGGGCAGC GTCGGTTGCT GCTGGAATTG CAGCTCTGAC AATCTGCGGC 
    TTCCCCACAT ACACATCTGC CAAACTAGCC GATCGAAGCA GAGTTCAAAA AGCACGGAAA 
    GGATCCAACA ATAATTATCG ACCAATTGAA GGACCTCGCT ACAGAAACAA TCGAAGCAAA 
    GACGCCAAAA GAGAGGGAGC TAGACTCGTT GCATCGTCAT CATCATCTGC TGCAACTGCA 
    CAACAACGAT CGAGCTCGGC ATCGTCGCCT GTGGGAGTTC GAGGTGCCAA AGTCTTGTCG 
    CAGAGTGACA ACTTCGACGT CAGAATGAAC ACAGACCCAG AATCATTCCG GCGTCATCTA 
    TCCTCTCAGC TCACGGGATG CTGCACCAAC TACATTTCCT ACTCGGCTGC CGATATGTGT 
    GCTCTCTATG GACAAGACTG TGAGACTGGA GAACAACCTT CACACGATTC TGGAGACGAA 
    GATTGTTCGC AGGCAGGTCT TTCCTTCATC GGAATTAGTT TTTCTGTGAA TACAGCTCTG 
    GGAAATCCTC TGTCTTATCA ACTGTGTGAT CAGTTTGCAA TGGAGAACAT TATTGATAGG 
    AACTATGACT ACGTTATGAG CATGGACGAG GACGGTTGGC TTGTTGGCGG AGGATATAAG 
    AGTTTTGACT ACTCTGGAAA GATGCCCTAC ATTGACTCGT CACACACTGA ATTGCTTCGC 
    ATTGGCAGTC TAGATCCTGA GTTCGGAGGA ACGTCTATTT CTCAAGTTTA TGATGCAATG 
    GACTCGCTCA ACTTTGCCCC ATTCTCTATC TTTCCCGAAT ACGTGAAAGG TGGAGGGGGA 
    CATCACTCGG GTGACGACGG TGACAAAGGC GTACCATCTT GTGATGTTAC TCTCATCGTC 
    AGTGTCGTAG ATACGTACGA AGACAATCAA TCTTACTCCA CATACGACGA GTTCTTGGAC 
    GATCTGTTTG ATGCATTGGA CGCTATGGGA GGTGGCCCTT GTATGGACGA TCATGATACG 
    GATCCTCACG TTTCAATGTC TCGTGGTGTC AAGTTCAAGA GTTCCTACCA CCAGCAACAG 
    TACTTTTACA AAGCCAACCT CGAGGTTGCC GTTTGGCAAG CAATGTACCC GAAGGGAGTT 
    GTTATCGGAA GCAAAGGCTA TGCATCGTTC CCACCGAACT CTGGTTCCAA AAACAGGATA 
    TATGTTGGAT ACGGGAACTT GTACTTCTTC TTTGACAGAG CAAACATTAC CAAAGCGTTC 
    ACACCTTACA GAGACCTCAC CGAGACGGAA TCTCACTACG CCACAATATA CTCCAGTGGT 
    CAATCTGATT CGTATTATGA ATCTACAACC AAAATTAGCT TCAACTACAA CAAAGGATCT 
    GGGTCACAAG ATAACAACCA GCAAGAATAT TACGAACACA ATCCGTACGG GTGGAATGCG 
    CAAATGGCAA AGCATGATAT GACAGATGGT TGGGATCTGC CGCCTAATTG CCAACAGGAA 
    GGCGAGACTT TCTTTGGGAT TCCTCTATCC AGAACATCTG ACTCAAAATT GCTGTCTACC 
    ACCAGTTTTC AGAATCAATT CGACTTTGAG TATCTGGTCG ATCGTAACTT CACCTACATG 
    CAAAAGTTTG GTACCAATCA TGGTTGGTTG GTGGGAGAAA CGCTTGACAA CGGTGCAGGA 
    TCTATCGTCG ACAAGGACAC TGCTCATATT CCCATCTTTT ACACGGGGTC AACAAATCCC 
    GAAATGGGAG GATTATCTTT GGAGAATCTA ATCAAAGTGG GAAAGAAGAT TGACTTTGGG 
    ACTCTGTACA TCAAACCAGC TTTTGTGTTC CAAGACGACG ATGGCAGTAT CAAGATGCAA 
    TTTGAAGCCG ATCCCAACTC TGCTCTCGGA TATCTTTACA GCAGTCTTTG TCAGATGATT 
    GGAATCTCAT GGAACTACGA CACTCCATAC AATGATCTTG GACTATACAC AAATTGTGCC 
    ATGCATGCAG CAGGCGATAG AGCCAAGTAT GGTTGTGGAC CAGAGAATGG TAGCAGTGGA 
    GGCTTCTGTC CTCAAATGAC GCTTGCCTAC CGAGTATCAT TTCAGTCTGA TGAACATGCT 
    GCTGCCTACC TCAATCGATG CAACAACTAT GTGGATTATT GGCGCAGCTT GTACCCATCT 
    GGAGTTGCCG TCGGAACTAC GTCATTCTGC CCAGACGGTG GCTGTCTCGC TCTCTTCTTG 
    AATCGTTACG ACGTCTTTTA CGTTTTCAAG CCCGACTTGG CAGGTTCGTG GGTCGAGTTC 
    ATGGGTGGAA CTGTTGCTCC GACAATATCA CCAGCACCAA CATACGAAGG AGGATGCGAC 
    AACCCTCACA ATTTGCACCT AGACTCTTGC TTTAGAAAAA AACACGTCCG TAAAGCCTCC 
    TCGGTCGCTT GGGATTCTCT TGGCACCGTT GGACAACTCT CGGTATTCCT TCTAGTCTTT 
    ATGGCATCGA CTCTCACGGT GTCAATCTTT CTCGCACGTG CCAAGCGGCG GCGTAGAGAC 
    GGAGAATCAT ATCTTGCGTT TCTATTTCGT GATATGCGAG GAAGCAAAAA GAAACGCAAG 
    AAGCTTCTAC GAAAGAGGAT GGGCAAAGGT ACGCTAGATG AAGATCTTCT GAGCGATGAC 
    GAAGGGTTCC GCAGTGTGCC TGCTCGCCCC GGAAGATCCG ATAGATCTGT CTACTCCAAA 
    TCATCAAGAC GTTCCAAACG TAGCAAGTCA AAATCTTCGA AGCGTAGCAA GTCAACAGAA 
    GATGAAGATG CCTCGATGAT TTCCGAGTCC AAATCTACTA GATCTCGTTC CAAGAGCAGA 
    ACCAGAGCTC GCTCTCGGTC GAGAAGTGCC AATCGGAATC TTCCTTCTAA AAAGTCGGAG 
    GACGAAGATG GACCCACAAG AAGGCAACTC GTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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