ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_7180 cDNA ORF clone

THAPS_7180 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_7180 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_7180 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09042 XM_002295892.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $629.30
$899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_7180 ( XM_002295892.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295928.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09042
    Clone ID Related Accession (Same CDS sequence) XM_002295892.1
    Accession Version XM_002295892.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3084bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012070). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    ATGGTGAAGA CCCGTCGTCG CCATAAGTTA GACGTCTTGG ACAAGATTGA CGTTATTAGC 
    CTAGTGGACA CTGATGAGAG TGGTTCTGAA GCATCAGCGC CATCACCAAA GCAGATTCAT 
    GATGTGGGTG ATATTGAAGA TATGAAGAGA CTGGCCTTGA TGGATGATGG CGGGGTGGAG 
    CCAATGTCTA ACAGGGGAGA CGGACCTACT GCATTGCATC AGAAGAAACA TGCTACTGCC 
    AACAAATCAA CCGGTAGCCG TGATGCCATC AGTGGCAAGA CGGCAGAGAG ACCTCCTCCC 
    GTCAACAGCA GCTACTGCGT CCAACCGGAC GGTGTAGTGT CATCCATCAA TGCACAATCA 
    TGCGTACCAC TCTTCGACGA GAATGACTAC AGAGATCTTC ATCAACGATA CCTAACACCA 
    CGAGTACGAG AAAAGGCTCA GCTTCCCGGA GGAATGACTC TACGAAGACA GTGCAGATCA 
    AGAATCATTG ATCAAAAAAC ACCAGGGTAT CGCAAACTAC GGCACAGAGT AGATGCATTG 
    CTAAAGAAGA ATAATCACCC TGACGTGTAT AGATTGCTAT GTCAACTGCG AGATTTTGAG 
    CTAGATCCAC GTAAGGTGCC GGAGATATTC CGAGAGGAGA AGACTGGCAA CGATGATAAT 
    GATGACGACG ATGGATTCTT GGAATACGTT GATCTAACGA ATGACAACGA GGATAGATTT 
    ATCGATGTGG ATGAATGCAT AACTGATCTG TTGCTTGTGA ACGTGAAATC AAAATCAGGA 
    CAGACCAACA GCAAGCGTCC AGATAGGATA GGATCCGGCG AATCAAATAC AGTCGAGCAT 
    ATGAAAAATC AACTTCAGGG AGTGTATAGA GTTGAGAATT GTGGAGTGAT CGCAATAGAG 
    AAGTTCTTGG ATGCATTAAT CATGAATGTT GCGAAAGAGT CTGTCACGAG TGATGCCACA 
    GGTGTACCGG ATGTTGCCGG CAGTGGTGAA GTGATCGTCC AGCGAAAGAT GGAACCGAGT 
    GCATCTGAGG CAATGGAGGC TGGATTTGAT ACTCTCCTCC TAGCTCTATT GAACAAAGAA 
    GTGCCACCAT TATCAAAGGC TAAAGACAGC AAAGCAAGAA GCCAAACTGA AGACGGCACT 
    AGCGAAAGAC GAACCTCACG GCGTCTATGG ATAGCCACCA AGACAGACGC GTTAAAGTAC 
    CTCGACAAAG TGAAAGAACG TTTTGTATCT TGTCCAGCAA TCTTCATCAA GTTCAGCGAA 
    CTAATCCTCT CCTTCCAACA GGGGAGGGAT ATCGGAGAAG TCGCCGACGA TGTATCAGCA 
    TTGCTTGCTG GTCACGATGA TTTACGGGAG GAATTTTCAC ACTGGTTGCC AGCCGGAGTG 
    CAGGTTGCGA AGAAAGTCGT CAGTAATAAG TCAATGCCCA AACGCGTAAT GCGTGAGCTG 
    AAGGTTGACC CTAGTTCTTC TTCTTCAGTT GCAGCAGCGA AACAGCCTCG ACCTCGTTTC 
    TCAGGCTTAG ACTTTGGCTT CTCGTCAATT CAAAGCGACA TATTGTGCCT TCAGAATGCC 
    TGCGGTGGCA TCGTCGTTGG TAACTGGAAT CGTTTGCAGC AGACGAGAGG AGCGTCGTCG 
    TCGGAAGGAT ACACCTACAC CTCTGTTTTT GCTTCTTATC AAATACCAAT GCAGACTCTC 
    CAATCAGTGC AGAGGAACTC AATTAGCTTT CAACCAACAA TTGCACAACA ACTCCCCAAG 
    GCAAAAGGTA GCAACATCGA AGTTCAGAAT GGCTGTGTTA TACCGTCTCG AAGAACTGTT 
    CTTCCTCCTC GCAAACCGTC ACAAATATCG CTTGCAGATG AGTGGAGGCA ACAGAACCGA 
    AAAAGGAGAA AGAAGGAATG GACACCAAAC GGCCATTTAA CTGGACGTTG GAAAGCTCCG 
    AAGTGGGCTA ATGGAATAAG CGATAACTCA CCGGTGAAAT ATGCGACTTG CAGACGGTCC 
    TTGCTTCCAC AGCTTGAAAG CCTGGTGGAC GAGTTTGTCT CACTTGCTAC CAAGACTGAT 
    GCAGTTGCAC AGGTATCTAC GAGGAAGGTG TTATGCAATG AGGTTATTCG TGCAAATCAG 
    CAAAAGAAGT CACCGGTTTC GCTAAGGGAG ATAGTCTGTC CCCTCTACGT CACACCAGAC 
    CTCATAACTC TTTTCAATGC TCATCAAGCT CTTGGTCGAC TGCTACCAAA AAGTGATTTG 
    GAGAGCTTTG ACGTGCTCAA TATTGCAAGA CGATACTACG ATCACTGGCG CCCCCCCCAA 
    ACTCGTGTCA TCCTACTTGC AGAGTCACAT GCTTTTACCG AGACGGAACG AGCACTGAAA 
    GGCCCAGGTC TGGACAGAAG CTTGCTCGAG AGATACACTG GTCCTCGGGA GCATCTCAGA 
    TTAGTGTACT CACTGACGTA TGGTGAAAAG GAAGCATTAT CATGTCCTGA CGACGACGCA 
    AACAAGGGTA CTCCTCAATT CTGGACACTT TTTGCTGCAT GTTCCAGAGG AGTTGAGTTC 
    GTGCCTGACA TAGACGATAC CAAACAAAAC GGCCGGTTTA CGTCAAAGTT TGCTTTGGAT 
    CTATTAAAAG GAGGGCGGTT ATCTGTCGAA GATAGGTTGG AAGCAAAGCT CAGAGTGTTA 
    GAGGATATGA AACGCCGTGG TATCTGGCTG TTGGATGCAA GCATATTTGG TTGGTACATA 
    TCGCAACCGC AACAGTACGC ACGATCGTCA GTTAGCAACG AAATCCACCG AGTGGCGAAG 
    CAGAGACCTC CGAAAGATCT GAAGTCTCCT TCACTTGTGC TGTCATGGGA ATTATTCACA 
    AAACATTTGA TACGAGACGT TGCGAACGAT GGCTATCTCA AACTATTGAT TCCTATTGGC 
    AAAGAAGTGG ATCAATCAAT TACTCGGGAA AGAATTGAAG ACGCAGTAAA GTCACCTTTT 
    GTAGATAGCA AATCCCATGC ACGTGTAGAG GACACGTTTC CGGCTCCAAA TGCTTGGATT 
    CCCGGAGGAT ATGGCCCTTT CTACGAAAAG CTTGCAGCAT TGGTGAACGA GGCAGCGCCA 
    GTTGTAAAGA GCGAGCCTGA GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295928.1
    CDS1..3084
    Translation

    Target ORF information:

    RefSeq Version XM_002295892.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295892.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    ATGGTGAAGA CCCGTCGTCG CCATAAGTTA GACGTCTTGG ACAAGATTGA CGTTATTAGC 
    CTAGTGGACA CTGATGAGAG TGGTTCTGAA GCATCAGCGC CATCACCAAA GCAGATTCAT 
    GATGTGGGTG ATATTGAAGA TATGAAGAGA CTGGCCTTGA TGGATGATGG CGGGGTGGAG 
    CCAATGTCTA ACAGGGGAGA CGGACCTACT GCATTGCATC AGAAGAAACA TGCTACTGCC 
    AACAAATCAA CCGGTAGCCG TGATGCCATC AGTGGCAAGA CGGCAGAGAG ACCTCCTCCC 
    GTCAACAGCA GCTACTGCGT CCAACCGGAC GGTGTAGTGT CATCCATCAA TGCACAATCA 
    TGCGTACCAC TCTTCGACGA GAATGACTAC AGAGATCTTC ATCAACGATA CCTAACACCA 
    CGAGTACGAG AAAAGGCTCA GCTTCCCGGA GGAATGACTC TACGAAGACA GTGCAGATCA 
    AGAATCATTG ATCAAAAAAC ACCAGGGTAT CGCAAACTAC GGCACAGAGT AGATGCATTG 
    CTAAAGAAGA ATAATCACCC TGACGTGTAT AGATTGCTAT GTCAACTGCG AGATTTTGAG 
    CTAGATCCAC GTAAGGTGCC GGAGATATTC CGAGAGGAGA AGACTGGCAA CGATGATAAT 
    GATGACGACG ATGGATTCTT GGAATACGTT GATCTAACGA ATGACAACGA GGATAGATTT 
    ATCGATGTGG ATGAATGCAT AACTGATCTG TTGCTTGTGA ACGTGAAATC AAAATCAGGA 
    CAGACCAACA GCAAGCGTCC AGATAGGATA GGATCCGGCG AATCAAATAC AGTCGAGCAT 
    ATGAAAAATC AACTTCAGGG AGTGTATAGA GTTGAGAATT GTGGAGTGAT CGCAATAGAG 
    AAGTTCTTGG ATGCATTAAT CATGAATGTT GCGAAAGAGT CTGTCACGAG TGATGCCACA 
    GGTGTACCGG ATGTTGCCGG CAGTGGTGAA GTGATCGTCC AGCGAAAGAT GGAACCGAGT 
    GCATCTGAGG CAATGGAGGC TGGATTTGAT ACTCTCCTCC TAGCTCTATT GAACAAAGAA 
    GTGCCACCAT TATCAAAGGC TAAAGACAGC AAAGCAAGAA GCCAAACTGA AGACGGCACT 
    AGCGAAAGAC GAACCTCACG GCGTCTATGG ATAGCCACCA AGACAGACGC GTTAAAGTAC 
    CTCGACAAAG TGAAAGAACG TTTTGTATCT TGTCCAGCAA TCTTCATCAA GTTCAGCGAA 
    CTAATCCTCT CCTTCCAACA GGGGAGGGAT ATCGGAGAAG TCGCCGACGA TGTATCAGCA 
    TTGCTTGCTG GTCACGATGA TTTACGGGAG GAATTTTCAC ACTGGTTGCC AGCCGGAGTG 
    CAGGTTGCGA AGAAAGTCGT CAGTAATAAG TCAATGCCCA AACGCGTAAT GCGTGAGCTG 
    AAGGTTGACC CTAGTTCTTC TTCTTCAGTT GCAGCAGCGA AACAGCCTCG ACCTCGTTTC 
    TCAGGCTTAG ACTTTGGCTT CTCGTCAATT CAAAGCGACA TATTGTGCCT TCAGAATGCC 
    TGCGGTGGCA TCGTCGTTGG TAACTGGAAT CGTTTGCAGC AGACGAGAGG AGCGTCGTCG 
    TCGGAAGGAT ACACCTACAC CTCTGTTTTT GCTTCTTATC AAATACCAAT GCAGACTCTC 
    CAATCAGTGC AGAGGAACTC AATTAGCTTT CAACCAACAA TTGCACAACA ACTCCCCAAG 
    GCAAAAGGTA GCAACATCGA AGTTCAGAAT GGCTGTGTTA TACCGTCTCG AAGAACTGTT 
    CTTCCTCCTC GCAAACCGTC ACAAATATCG CTTGCAGATG AGTGGAGGCA ACAGAACCGA 
    AAAAGGAGAA AGAAGGAATG GACACCAAAC GGCCATTTAA CTGGACGTTG GAAAGCTCCG 
    AAGTGGGCTA ATGGAATAAG CGATAACTCA CCGGTGAAAT ATGCGACTTG CAGACGGTCC 
    TTGCTTCCAC AGCTTGAAAG CCTGGTGGAC GAGTTTGTCT CACTTGCTAC CAAGACTGAT 
    GCAGTTGCAC AGGTATCTAC GAGGAAGGTG TTATGCAATG AGGTTATTCG TGCAAATCAG 
    CAAAAGAAGT CACCGGTTTC GCTAAGGGAG ATAGTCTGTC CCCTCTACGT CACACCAGAC 
    CTCATAACTC TTTTCAATGC TCATCAAGCT CTTGGTCGAC TGCTACCAAA AAGTGATTTG 
    GAGAGCTTTG ACGTGCTCAA TATTGCAAGA CGATACTACG ATCACTGGCG CCCCCCCCAA 
    ACTCGTGTCA TCCTACTTGC AGAGTCACAT GCTTTTACCG AGACGGAACG AGCACTGAAA 
    GGCCCAGGTC TGGACAGAAG CTTGCTCGAG AGATACACTG GTCCTCGGGA GCATCTCAGA 
    TTAGTGTACT CACTGACGTA TGGTGAAAAG GAAGCATTAT CATGTCCTGA CGACGACGCA 
    AACAAGGGTA CTCCTCAATT CTGGACACTT TTTGCTGCAT GTTCCAGAGG AGTTGAGTTC 
    GTGCCTGACA TAGACGATAC CAAACAAAAC GGCCGGTTTA CGTCAAAGTT TGCTTTGGAT 
    CTATTAAAAG GAGGGCGGTT ATCTGTCGAA GATAGGTTGG AAGCAAAGCT CAGAGTGTTA 
    GAGGATATGA AACGCCGTGG TATCTGGCTG TTGGATGCAA GCATATTTGG TTGGTACATA 
    TCGCAACCGC AACAGTACGC ACGATCGTCA GTTAGCAACG AAATCCACCG AGTGGCGAAG 
    CAGAGACCTC CGAAAGATCT GAAGTCTCCT TCACTTGTGC TGTCATGGGA ATTATTCACA 
    AAACATTTGA TACGAGACGT TGCGAACGAT GGCTATCTCA AACTATTGAT TCCTATTGGC 
    AAAGAAGTGG ATCAATCAAT TACTCGGGAA AGAATTGAAG ACGCAGTAAA GTCACCTTTT 
    GTAGATAGCA AATCCCATGC ACGTGTAGAG GACACGTTTC CGGCTCCAAA TGCTTGGATT 
    CCCGGAGGAT ATGGCCCTTT CTACGAAAAG CTTGCAGCAT TGGTGAACGA GGCAGCGCCA 
    GTTGTAAAGA GCGAGCCTGA GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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