LOC108701902 cDNA ORF clone, Xenopus laevis(African clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108701902
Entrez Gene ID	108701902
Full Name	E3 ubiquitin-protein ligase TRIM39-like
Gene Type	protein-coding
Organism	Xenopus laevis(African clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018236915.1	XP_018092404.1	E3 ubiquitin-protein ligase TRIM39-like

Pathways from BioSystems
Gene Ontology

The following LOC108701902 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108701902 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAf47146	XM_018236915.1 Latest version!	Xenopus laevis E3 ubiquitin-protein ligase TRIM39-like (LOC108701902), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108701902 ( XM_018236915.1 ) cDNA ORF clone, Xenopus laevis(African clawed frog) -> XP_018092404.1 Xenopus laevis E3 ubiquitin-protein ligase TRIM39-like (LOC108701902), mRNA.

Price & Availability↑

CloneID	OAf47146
Clone ID Related Accession (Same CDS sequence)	XM_018236915.1
Accession Version	XM_018236915.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1557bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-19
Organism	Xenopus laevis(African clawed frog)
Product	E3 ubiquitin-protein ligase TRIM39-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030740.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus laevis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END##

ATGGAGTCTG CTGAGCTGAG AGCGGAGCTA AACTGTTCCA TTTGCCTGTC CATTTATACT 
GATCCTGTAA TGCTGACATG TGGCCATAAC TTCTGCCAGG TGTGTATAGG GAACGTGCTG 
GATGGCCAAG AGGAACAGGG AGTTTATTCC TGCCCGGAAT GCCGTGAAGA GTTCCCCGAG 
CGGCCTGCTC TGCACAGAAA CCTGAAGCTG AGCAACATAG CAGAGCATGT CCTGACGGCT 
CATTCGGAGC AGAGGGAGTC TGGGATATTG TGCACTTACT GTGAATCTGC TGTACCTGCT 
GATAAAACAG GCCTACACTG TGATGCCTCC TTGTGTCACA GTCATTTAAC TGAACCCACC 
ACTTCCTCTG GGATGGGAAA ATGCTCTGTA CACAACGAAA CCCTGATGTA TTACTGCTGC 
GATGATGATG TCTGTATCTG TGCCTCTTGC GGACTGTTTG GGGACCACAG GGGACACCAG 
TTGGAACCAG TAAATAAGGC CTCTGGAAAG AAGAAGCAGA AGCTCAATAC AGTCATGGAT 
CAACTGGTAT CTAAGAAGGA AAATACAGAT AAACAAATCC GGGTGCTGCT GCATCAGATT 
AGAGACATAC AAGAAAAGGC TTTGAGTTTA GCTGGGAGGG TGACCATTCT GTTTAAGGAT 
ATTAATAAAT TGTTAGGGGA TCTAGAGCAT AAAGTCAATG ATGAGATCTT CCGGCAAGAA 
GAACAGGAGT TGCACCGTAT CTCTGACCTT GTACAGCAGC TGGAGACAAA GAAGGATGAG 
ATCTCCAAGA AGATTCTTCA CATTGAGGCA ACACATGATG GCACTGATCC TTTAAGGGTC 
CCACAGGAAA CTTTAGAAGA GAGTGAGATG TTCCAGAGGG ACACAGGAGA TGATTTAAAT 
ACAGTTGGTT GCCTAGATGA GACATCCATC TCATTGATGT TAGACAAAGG CCTTAGAAAC 
TTTGCTGACC AAGTCCTTGA GCTCAGGGCC AAACAGCAGC TTCCAGTGCT GGGGATTCCA 
GATGTATTAC TGGATGTAAC AACTGCAAAT AATTACATCG TTATATCGGA CGATATGAAA 
TCGGCGTCTT TTACATCTAA AAACCAGAGG AGGCCAGACG GCCCGGAGAG GTTCATATCA 
TGTCAGGTCT TAAGCATCGA TGGTTTCTCC TCAGGCCAAC ACTACTGGAA GGTGGATGTG 
AGCAAAGCCA AAGTATGGAA TATAGGGGTG GCCTATGCAA GTATAGAGAG GAAAATAGAC 
GGCCCAGAGT CTTACATTGG CTTTAATAAG AAGTCCTGGA GTCTGGCTTT CCAGAACACA 
TTGGGTGCTC TTCACAAGAA GAAAGGACAG AAGATAATCT ATTGCTCTCC TTTACAGACA 
GTTGGGATTT TCCTGAATTA CGAGGCTGGG CAGCTGTCCT TTTATCAAGA ATCTGACACC 
AAGCGGCACT TGCACACCTT CACTGCCACC TTCACTGAGC CCCTTCATGC TGCTTTTTTT 
ATACCGGAAG ATAGCCACAT AACAGTGTGG GGTGGGAAGG GTATTTATAG TACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018092404.1
CDS	219..1775
Translation	MESAELRAELNCSICLSIYTDPVMLTCGHNFCQVCIGNVLDGQEEQGVYSCPECREEFPERPALHRNLKLSNIAEHVLTAHSEQRESGILCTYCESAVPADKTGLHCDASLCHSHLTEPTTSSGMGKCSVHNETLMYYCCDDDVCICASCGLFGDHRGHQLEPVNKASGKKKQKLNTVMDQLVSKKENTDKQIRVLLHQIRDIQEKALSLAGRVTILFKDINKLLGDLEHKVNDEIFRQEEQELHRISDLVQQLETKKDEISKKILHIEATHDGTDPLRVPQETLEESEMFQRDTGDDLNTVGCLDETSISLMLDKGLRNFADQVLELRAKQQLPVLGIPDVLLDVTTANNYIVISDDMKSASFTSKNQRRPDGPERFISCQVLSIDGFSSGQHYWKVDVSKAKVWNIGVAYASIERKIDGPESYIGFNKKSWSLAFQNTLGALHKKKGQKIIYCSPLQTVGIFLNYEAGQLSFYQESDTKRHLHTFTATFTEPLHAAFFIPEDSHITVWGGKGIYST

Target ORF information:

RefSeq Version	XM_018236915.1
Organism	Xenopus laevis(African clawed frog)
Definition	Xenopus laevis E3 ubiquitin-protein ligase TRIM39-like (LOC108701902), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018236915.1

ORF Insert Sequence:

ATGGAGTCTG CTGAGCTGAG AGCGGAGCTA AACTGTTCCA TTTGCCTGTC CATTTATACT 
GATCCTGTAA TGCTGACATG TGGCCATAAC TTCTGCCAGG TGTGTATAGG GAACGTGCTG 
GATGGCCAAG AGGAACAGGG AGTTTATTCC TGCCCGGAAT GCCGTGAAGA GTTCCCCGAG 
CGGCCTGCTC TGCACAGAAA CCTGAAGCTG AGCAACATAG CAGAGCATGT CCTGACGGCT 
CATTCGGAGC AGAGGGAGTC TGGGATATTG TGCACTTACT GTGAATCTGC TGTACCTGCT 
GATAAAACAG GCCTACACTG TGATGCCTCC TTGTGTCACA GTCATTTAAC TGAACCCACC 
ACTTCCTCTG GGATGGGAAA ATGCTCTGTA CACAACGAAA CCCTGATGTA TTACTGCTGC 
GATGATGATG TCTGTATCTG TGCCTCTTGC GGACTGTTTG GGGACCACAG GGGACACCAG 
TTGGAACCAG TAAATAAGGC CTCTGGAAAG AAGAAGCAGA AGCTCAATAC AGTCATGGAT 
CAACTGGTAT CTAAGAAGGA AAATACAGAT AAACAAATCC GGGTGCTGCT GCATCAGATT 
AGAGACATAC AAGAAAAGGC TTTGAGTTTA GCTGGGAGGG TGACCATTCT GTTTAAGGAT 
ATTAATAAAT TGTTAGGGGA TCTAGAGCAT AAAGTCAATG ATGAGATCTT CCGGCAAGAA 
GAACAGGAGT TGCACCGTAT CTCTGACCTT GTACAGCAGC TGGAGACAAA GAAGGATGAG 
ATCTCCAAGA AGATTCTTCA CATTGAGGCA ACACATGATG GCACTGATCC TTTAAGGGTC 
CCACAGGAAA CTTTAGAAGA GAGTGAGATG TTCCAGAGGG ACACAGGAGA TGATTTAAAT 
ACAGTTGGTT GCCTAGATGA GACATCCATC TCATTGATGT TAGACAAAGG CCTTAGAAAC 
TTTGCTGACC AAGTCCTTGA GCTCAGGGCC AAACAGCAGC TTCCAGTGCT GGGGATTCCA 
GATGTATTAC TGGATGTAAC AACTGCAAAT AATTACATCG TTATATCGGA CGATATGAAA 
TCGGCGTCTT TTACATCTAA AAACCAGAGG AGGCCAGACG GCCCGGAGAG GTTCATATCA 
TGTCAGGTCT TAAGCATCGA TGGTTTCTCC TCAGGCCAAC ACTACTGGAA GGTGGATGTG 
AGCAAAGCCA AAGTATGGAA TATAGGGGTG GCCTATGCAA GTATAGAGAG GAAAATAGAC 
GGCCCAGAGT CTTACATTGG CTTTAATAAG AAGTCCTGGA GTCTGGCTTT CCAGAACACA 
TTGGGTGCTC TTCACAAGAA GAAAGGACAG AAGATAATCT ATTGCTCTCC TTTACAGACA 
GTTGGGATTT TCCTGAATTA CGAGGCTGGG CAGCTGTCCT TTTATCAAGA ATCTGACACC 
AAGCGGCACT TGCACACCTT CACTGCCACC TTCACTGAGC CCCTTCATGC TGCTTTTTTT 
ATACCGGAAG ATAGCCACAT AACAGTGTGG GGTGGGAAGG GTATTTATAG TACATAA