ttc39a cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	ttc39a
Entrez Gene ID	549528
Full Name	tetratricopeptide repeat domain 39A
General protein information	Preferred Names tetratricopeptide repeat domain 39A Names tetratricopeptide repeat protein 39A TPR repeat protein 39A
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001016774.2	NP_001016774.1	tetratricopeptide repeat protein 39A

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	TTC39A	XP_513400.3
Bos taurus (cattle)	TTC39A	XP_002686408.2
Rattus norvegicus (Norway rat)	LOC100910316	XP_006238644.1
Xenopus tropicalis (tropical clawed frog)	ttc39a	NP_001016774.1
Canis lupus familiaris (dog)	TTC39A	XP_003639567.2
Gallus gallus (chicken)	TTC39A	XP_004936841.1
Danio rerio (zebrafish)	ttc39a	XP_005166978.1
Homo sapiens (human)	TTC39A	NP_001073963.1
	TTC39A	XP_001111084.1
Mus musculus (house mouse)	Ttc39a	NP_001139420.1

Gene Ontology

The following ttc39a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ttc39a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OXa24456	NM_001016774.2 Latest version!	Xenopus tropicalis tetratricopeptide repeat domain 39A (ttc39a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ttc39a ( NM_001016774.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001016774.1 Xenopus tropicalis tetratricopeptide repeat domain 39A (ttc39a), mRNA.

Price & Availability↑

CloneID	OXa24456
Clone ID Related Accession (Same CDS sequence)	NM_001016774.2
Accession Version	NM_001016774.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1689bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-22
Organism	Xenopus tropicalis(tropical clawed frog)
Product	tetratricopeptide repeat protein 39A
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR855725.2. On Oct 14, 2005 this sequence version replaced NM_001016774.1. ##Evidence-Data-START## Transcript exon combination :: CR855725.2 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END##

ATGTCTAAAG ACGCAGGCGG AGGGCAGATG AATTCAAACC TAAAAACCTC TCTTTCTGAA 
TGTATGGAGG CCCTTGACTT ATTTCTAAGC AACAACTTCC AGGAGGCATT GGACCAGCTT 
CGGGCAAAGT CAAAAGACAG CATGTACCAT GCCCTTACCT ATGCCACTAT GTTGGAAATG 
CAGGCGATGA TGACCTTTGA TCCACAGGAC ATACTGAATG CTGGGAACAC CATGAAGGAG 
GCTCAGGCAG TTTGTCAGAG GTATAGAAGG AAATCCACGG TGGTAGACTC TTTCAACAGC 
TTAGTCCATA AACAGAGTCT TGATCAGTTC ACTGAAGAGG AGATCCACGC AGAAGTGTGT 
TATGCAGAGT GCCTACTTCA GAGAGCGGCG CTAACTTTTC TGCAGGACGA GAATATGGTC 
AGTTTTATTA AAGGAGGAAT CAAGGTCAGG AACAGCTATC AGACATACAA AGAGCTTCAC 
AGCCTGCAGC AATGTGCAAA CTATGCCAAA GGAGAGAGTC ATTGTCACTT TGAAGGTGGA 
GTGAAGCTGG GCGTAGGAGC TTTTAACCTG ACCATCTCTA TGTTGCCTAC AAGAATTTTA 
CGGCTACTAG AATTTGTTGG ATTTTCAGGA AATAAGGATT ATGGGTTGTC ACAACTGCAG 
GAGGGAACCA CAGTGCACAG TTTCCGGGCC CTACTCTGCA CCCTTCTGCT CCTGTGTTAT 
CACACTTTCC TGAGGTTTGT GCTTGGGACA GGCAGTGGAA ACATTGAGGA AGCAGAAAAG 
CTCTTGGAAC CATATCTAAA GCGATACCCA AAGGGAGCAA TATTTCTGTT TTTTGCTGGA 
AGAATTGAGG AAATTAAAGG CAACATTGAT GAGGCCATAA GCAGATTCGA GGAGTGCTGT 
GAGTCCCAGC AGAATTGGAA GCAGTTTCAC CATATGTGCT ACTGGCAGCT GATGTGGTGT 
TTCACATACA AGCAGCACTG GAAAATGGCA TATTTCTATG CTGATCTCCT TAGTAAGGAG 
AATTCCTGGT CTAAGGCCAC ATACATGTAC ATGAAAGCCG CCTACCTCAG CATGTTTGCA 
GAAGACGACT GTAAACCATT TGGGGATGAT GAAGTACAGA TCTTCAGACT TGTCCCAAGT 
TTAAAACTCA AGATAGCTGG AAAATCTCTT CCCACTGAGA AATTTGCAAT TCGAAAATCC 
CGAAGATATC TTGCACAGAA ACTTGTGCCG CTACCAGTTC CTCCATTGGA AATGATGTAT 
ATTTGGAATG GCTATGCAGT GATTGGAAAG CATCAAGATT TGACGGAAGC AATGCTGCAA 
ACACTGGTCC GGGCTGAGAA ATCTTTGGAA GGAGTCACAG CCTCTGAATT CTTGATAGAT 
GATCGGTGTG TGGTCAAGCT GCTGAAAGGC CTTTGCTACA AATATCTGGG CCGAATCCCA 
GAGGCAGTGG AGAGTTTCAG CTACATACAA CTCAATGAGA AAAGGATTAA ATACGACCAT 
TACCTCGTTC CCAATGCCAT GCTGGAGCTG GCTCTTCTGT ATCTTCAGTT GGAAAAGAAG 
GAGGAGGCCC TTCGACTTCT GGAAAATGCC AAGAACAACT ACAAGAATTA CTCCATGGAA 
TCCCGCACAC ATTTCAGGAT TCAGGATGCC CTGCAACAAG CAAAATCTCT CCCACAAAAT 
GGCTGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001016774.1
CDS	106..1794
Translation	MSKDAGGGQMNSNLKTSLSECMEALDLFLSNNFQEALDQLRAKSKDSMYHALTYATMLEMQAMMTFDPQDILNAGNTMKEAQAVCQRYRRKSTVVDSFNSLVHKQSLDQFTEEEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELHSLQQCANYAKGESHCHFEGGVKLGVGAFNLTISMLPTRILRLLEFVGFSGNKDYGLSQLQEGTTVHSFRALLCTLLLLCYHTFLRFVLGTGSGNIEEAEKLLEPYLKRYPKGAIFLFFAGRIEEIKGNIDEAISRFEECCESQQNWKQFHHMCYWQLMWCFTYKQHWKMAYFYADLLSKENSWSKATYMYMKAAYLSMFAEDDCKPFGDDEVQIFRLVPSLKLKIAGKSLPTEKFAIRKSRRYLAQKLVPLPVPPLEMMYIWNGYAVIGKHQDLTEAMLQTLVRAEKSLEGVTASEFLIDDRCVVKLLKGLCYKYLGRIPEAVESFSYIQLNEKRIKYDHYLVPNAMLELALLYLQLEKKEEALRLLENAKNNYKNYSMESRTHFRIQDALQQAKSLPQNGC

Target ORF information:

RefSeq Version	NM_001016774.2
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis tetratricopeptide repeat domain 39A (ttc39a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001016774.2

ORF Insert Sequence:

ATGTCTAAAG ACGCAGGCGG AGGGCAGATG AATTCAAACC TAAAAACCTC TCTTTCTGAA 
TGTATGGAGG CCCTTGACTT ATTTCTAAGC AACAACTTCC AGGAGGCATT GGACCAGCTT 
CGGGCAAAGT CAAAAGACAG CATGTACCAT GCCCTTACCT ATGCCACTAT GTTGGAAATG 
CAGGCGATGA TGACCTTTGA TCCACAGGAC ATACTGAATG CTGGGAACAC CATGAAGGAG 
GCTCAGGCAG TTTGTCAGAG GTATAGAAGG AAATCCACGG TGGTAGACTC TTTCAACAGC 
TTAGTCCATA AACAGAGTCT TGATCAGTTC ACTGAAGAGG AGATCCACGC AGAAGTGTGT 
TATGCAGAGT GCCTACTTCA GAGAGCGGCG CTAACTTTTC TGCAGGACGA GAATATGGTC 
AGTTTTATTA AAGGAGGAAT CAAGGTCAGG AACAGCTATC AGACATACAA AGAGCTTCAC 
AGCCTGCAGC AATGTGCAAA CTATGCCAAA GGAGAGAGTC ATTGTCACTT TGAAGGTGGA 
GTGAAGCTGG GCGTAGGAGC TTTTAACCTG ACCATCTCTA TGTTGCCTAC AAGAATTTTA 
CGGCTACTAG AATTTGTTGG ATTTTCAGGA AATAAGGATT ATGGGTTGTC ACAACTGCAG 
GAGGGAACCA CAGTGCACAG TTTCCGGGCC CTACTCTGCA CCCTTCTGCT CCTGTGTTAT 
CACACTTTCC TGAGGTTTGT GCTTGGGACA GGCAGTGGAA ACATTGAGGA AGCAGAAAAG 
CTCTTGGAAC CATATCTAAA GCGATACCCA AAGGGAGCAA TATTTCTGTT TTTTGCTGGA 
AGAATTGAGG AAATTAAAGG CAACATTGAT GAGGCCATAA GCAGATTCGA GGAGTGCTGT 
GAGTCCCAGC AGAATTGGAA GCAGTTTCAC CATATGTGCT ACTGGCAGCT GATGTGGTGT 
TTCACATACA AGCAGCACTG GAAAATGGCA TATTTCTATG CTGATCTCCT TAGTAAGGAG 
AATTCCTGGT CTAAGGCCAC ATACATGTAC ATGAAAGCCG CCTACCTCAG CATGTTTGCA 
GAAGACGACT GTAAACCATT TGGGGATGAT GAAGTACAGA TCTTCAGACT TGTCCCAAGT 
TTAAAACTCA AGATAGCTGG AAAATCTCTT CCCACTGAGA AATTTGCAAT TCGAAAATCC 
CGAAGATATC TTGCACAGAA ACTTGTGCCG CTACCAGTTC CTCCATTGGA AATGATGTAT 
ATTTGGAATG GCTATGCAGT GATTGGAAAG CATCAAGATT TGACGGAAGC AATGCTGCAA 
ACACTGGTCC GGGCTGAGAA ATCTTTGGAA GGAGTCACAG CCTCTGAATT CTTGATAGAT 
GATCGGTGTG TGGTCAAGCT GCTGAAAGGC CTTTGCTACA AATATCTGGG CCGAATCCCA 
GAGGCAGTGG AGAGTTTCAG CTACATACAA CTCAATGAGA AAAGGATTAA ATACGACCAT 
TACCTCGTTC CCAATGCCAT GCTGGAGCTG GCTCTTCTGT ATCTTCAGTT GGAAAAGAAG 
GAGGAGGCCC TTCGACTTCT GGAAAATGCC AAGAACAACT ACAAGAATTA CTCCATGGAA 
TCCCGCACAC ATTTCAGGAT TCAGGATGCC CTGCAACAAG CAAAATCTCT CCCACAAAAT 
GGCTGCTGA