| Gene Symbol | IDP628 |
| Entrez Gene ID | 100193317 |
| Full Name | uncharacterized LOC100193317 |
| Synonyms | GRMZM2G156748 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » IDP628 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_008682910.2 | XP_008681132.1 | cycloartenol synthase isoform X2 |
| XM_008682911.2 | XP_008681133.1 | cycloartenol synthase isoform X3 |
| XM_008682912.2 | XP_008681134.1 | cycloartenol synthase isoform X5 |
| XM_020553064.1 | XP_020408653.1 | cycloartenol synthase isoform X6 |
| NM_001138454.2 | NP_001131926.2 | uncharacterized protein LOC100193317 |
| XM_020553063.1 | XP_020408652.1 | cycloartenol synthase isoform X4 |
| XM_008682909.2 | XP_008681131.1 | cycloartenol synthase isoform X1 |
The B73 maize genome: complexity, diversity, and dynamics.
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following IDP628 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IDP628 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa23908 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008682912.2 | |
| Accession Version | XM_008682912.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1902bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008682912.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008681134.1 |
| CDS | 39..1940 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008682912.2 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa23909 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001138454.2 | |
| Accession Version | NM_001138454.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2271bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-03-13 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100193317 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01001663.1, BT035549.1 and BM073941.1. On or before Apr 30, 2015 this sequence version replaced XM_008682908.1, NM_001138454.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EU956813.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001131926.2 |
| CDS | 45..2315 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001138454.2 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa23905 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008682909.2 | |
| Accession Version | XM_008682909.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008682909.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008681131.1 |
| CDS | 39..2210 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008682909.2 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa23906 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008682910.2 | |
| Accession Version | XM_008682910.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2157bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008682910.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008681132.1 |
| CDS | 39..2195 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008682910.2 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa23907 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008682911.2 | |
| Accession Version | XM_008682911.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008682911.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008681133.1 |
| CDS | 39..2186 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008682911.2 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa61338 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553063.1 | |
| Accession Version | XM_020553063.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2082bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020408652.1 |
| CDS | 39..2120 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020553063.1 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa61339 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553064.1 | |
| Accession Version | XM_020553064.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1734bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-12-17 | |
| Organism | Zea mays | |
| Product | cycloartenol synthase isoform X6 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024463.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020408653.1 |
| CDS | 39..1772 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020553064.1 |
1 | ATGTGGAGGC TAAAGATCGG CGAGAGGCCA AGCAACCCGC TGCTTCGCTC GCCCAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The B73 maize genome: complexity, diversity, and dynamics. |