Gene Symbol |
BASP1 |
Entrez Gene ID |
286842 |
Full Name |
brain abundant membrane attached signal protein 1 |
Synonyms |
NAP22 |
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_174780.3 |
NP_777205.1 |
brain acid soluble protein 1 |
XM_024981215.1 |
XP_024836983.1 |
brain acid soluble protein 1 isoform X1 |
XM_024981216.1 |
XP_024836984.1 |
brain acid soluble protein 1 isoform X1 |
XM_024981217.1 |
XP_024836985.1 |
brain acid soluble protein 1 isoform X1 |
XM_024981218.1 |
XP_024836986.1 |
brain acid soluble protein 1 isoform X1 |
XM_024981219.1 |
XP_024836987.1 |
brain acid soluble protein 1 isoform X1 |
Homo sapiens (human) |
BASP1 |
NP_001258535.1 |
Pan troglodytes (chimpanzee) |
BASP1 |
XP_003310683.1 |
|
LOC700114 |
XP_001087717.1 |
Mus musculus (house mouse) |
Basp1 |
NP_081671.1 |
Canis lupus familiaris (dog) |
BASP1 |
XP_005619479.1 |
Bos taurus (cattle) |
BASP1 |
NP_777205.1 |
Rattus norvegicus (Norway rat) |
LOC100910172 |
XP_003750663.2 |
Related articles in PubMed
Ion channel activity of brain abundant protein BASP1 in planar lipid bilayers.
Ostroumova OS, Schagina LV, Mosevitsky MI, Zakharov VV
The FEBS journal278(3)461-9(2011 Feb)
Oligomeric structure of brain abundant proteins GAP-43 and BASP1.
Zakharov VV, Mosevitsky MI
Journal of structural biology170(3)470-83(2010 Jun)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marçais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of bovine and human cDNAs encoding NAP-22 (22 kDa neuronal tissue-enriched acidic protein) homologs.
Park S, Kim YI, Kim B, Seong C, Oh Y, Baek K, Yoon J
Molecules and cells8(4)471-7(1998 Aug)
The BASP1 family of myristoylated proteins abundant in axonal termini. Primary structure analysis and physico-chemical properties.
Mosevitsky MI, Capony JP, Skladchikova GYu, Novitskaya VA, Plekhanov AYu, Zakharov VV
Biochimie79(6)373-84(1997 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BASP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BASP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_777205.1 |
CDS | 190..873 |
Translation | |
Target ORF information:
RefSeq Version | NM_174780.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_174780.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42119 |
Clone ID Related Accession (Same CDS sequence) |
NM_174780.3
, XM_024981215.1
, XM_024981216.1
, XM_024981217.1
, XM_024981218.1
, XM_024981219.1
|
Accession Version |
XM_024981215.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
brain acid soluble protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037347.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024836983.1 |
CDS | 293..976 |
Translation | |
Target ORF information:
RefSeq Version | XM_024981215.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024981215.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42119 |
Clone ID Related Accession (Same CDS sequence) |
NM_174780.3
, XM_024981215.1
, XM_024981216.1
, XM_024981217.1
, XM_024981218.1
, XM_024981219.1
|
Accession Version |
XM_024981216.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
brain acid soluble protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037347.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024836984.1 |
CDS | 130..813 |
Translation | |
Target ORF information:
RefSeq Version | XM_024981216.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024981216.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42119 |
Clone ID Related Accession (Same CDS sequence) |
NM_174780.3
, XM_024981215.1
, XM_024981216.1
, XM_024981217.1
, XM_024981218.1
, XM_024981219.1
|
Accession Version |
XM_024981217.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
brain acid soluble protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037347.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024836985.1 |
CDS | 139..822 |
Translation | |
Target ORF information:
RefSeq Version | XM_024981217.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024981217.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42119 |
Clone ID Related Accession (Same CDS sequence) |
NM_174780.3
, XM_024981215.1
, XM_024981216.1
, XM_024981217.1
, XM_024981218.1
, XM_024981219.1
|
Accession Version |
XM_024981218.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
brain acid soluble protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037347.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024836986.1 |
CDS | 51..734 |
Translation | |
Target ORF information:
RefSeq Version | XM_024981218.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024981218.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa42119 |
Clone ID Related Accession (Same CDS sequence) |
NM_174780.3
, XM_024981215.1
, XM_024981216.1
, XM_024981217.1
, XM_024981218.1
, XM_024981219.1
|
Accession Version |
XM_024981219.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1-C-(k)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
brain acid soluble protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037347.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024836987.1 |
CDS | 83..766 |
Translation | |
Target ORF information:
RefSeq Version | XM_024981219.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus brain abundant membrane attached signal protein 1 (BASP1), transcript variant X5, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024981219.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGGAGGCA AACTGAGCAA GAAGAAGAAG GGGTACAATG TGAATGATGA GAAGGCCAAG GACAAAGACA AGAAGGCTGA AGGGGCTGGG ACAGAAGAGG AGGGAACCCC AAAGGAGAAT GAGGCCCAGG CTGCTGCCGA GACCCCAGAG GTGAAGGAGG GCAAAGAGGA GAAGCCGGAG AAGGATGCCC AGGACACCAC CAAGCCCGAA GACAAGGAAG GCGAGAAAGA TGCCGAGGCA GCCAAGGAAG ATGCCCCGAA GGCAGAGCCT GAGCCGACGG AGGGGGCCGA GGGCAAGCCA GAGCCCCCCA AAGATGCTGA GCAGGAGCCG GCGGCTGCCT CAGGCCCCTC CACTGGCGGC GACGCCCCCA AAGCTTCGGA GGCTGAGGCA GCAGAGCCTG CGGCCCCCAC CAAGGATGAC AAGAGCAAGG AGGGAGGGGA CGCCACAAAG ACTGAGGCTC CCGCCGCTCC TGCCGCGCAG GAGACGAAAA GTGACGGGGC CCCAGCTTCA GACTCAAAAC CCAGCAGCAC TGAGGCTGCC CCATCCTCCA AGGAGACGCC GGCAGCCACG GAAGCGCCGA GTTCCACGCC CAAGGCTCAG GCCCCCGCAG CCCCCGCAGA CGAGGTCAAA CCTGCCGAGA CCCCGGCAGC TAATTCCGAT CAAACCGTAG CAGTGAAAGA GTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Marçais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |