Gene Symbol |
PARD6A |
Entrez Gene ID |
524653 |
Full Name |
par-6 family cell polarity regulator alpha |
General protein information |
- Preferred Names
par-6 family cell polarity regulator alpha
Names
partitioning defective 6 homolog alpha
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_024978302.1 |
XP_024834070.1 |
partitioning defective 6 homolog alpha isoform X1 |
NM_001046274.1 |
NP_001039739.1 |
partitioning defective 6 homolog alpha |
Canis lupus familiaris (dog) |
PARD6A |
XP_546876.5 |
Mus musculus (house mouse) |
Pard6a |
NP_062669.2 |
Gallus gallus (chicken) |
PARD6A |
XP_004944104.1 |
Danio rerio (zebrafish) |
pard6a |
NP_001093521.2 |
|
PARD6A |
XP_001092684.1 |
Bos taurus (cattle) |
PARD6A |
NP_001039739.1 |
Homo sapiens (human) |
PARD6A |
NP_058644.1 |
Pan troglodytes (chimpanzee) |
PARD6A |
XP_511037.2 |
Rattus norvegicus (Norway rat) |
Pard6a |
NP_001003653.1 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PARD6A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PARD6A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa39646 |
Clone ID Related Accession (Same CDS sequence) |
NM_001046274.1
|
Accession Version |
NM_001046274.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1035bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-13 |
Organism |
Bos taurus(cattle) |
Product |
partitioning defective 6 homolog alpha |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC113337.1. On or before Sep 7, 2006 this sequence version replaced XM_602983.2, XM_878020.1, XM_878063.1, XM_878109.1.
##Evidence-Data-START##
Transcript exon combination :: BC113337.1, CB449497.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145415 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGCCAGGC CACAGAGGAC TCCAGCACGC AGTCCCGACA GCATCGTCGA GGTGAAGAGC AAATTTGATG CTGAGTTCCG ACGCTTTGCT CTGCCTCGCG CTTCAGTGAG CGGCTTCCAG GAGTTTTCTC GGTTGCTGCG TGCAGTACAC CAGATCCCGG GCCTGGACGT GCTGCTTGGC TATACTGATG CTCACGGCGA CCTACTACCC CTCACCAACG ACGACAGCCT GCACCGGGCC CTGTCCAGCG GGCCCCCACC ACTGCGCCTG CTAGTGCAGA AGCGGGCAGA AGCTGATTCC AGTGGCCTGG CCTTTGCCTC CAACTCTCTG CAACGGCGCA AGAAAGGGCT CCTACTTCGG CCAGTGGCAC CCCTGCGCAC CCGGCCACCG CTACTGATCA GCCTGCCACA AGATTTCCGC CAGGTTTCTT CAGTCATAGA TGTGGACCTA CTGCCTGAGA CCCATCGACG GGTGCGGCTA CATAAGCATG GTTCCGACCG CCCCCTGGGT TTCTACATCC GAGATGGCAT GAGCGTGCGA GTAGCTCCCC AGGGCCTGGA ACGGGTTCCA GGCATCTTCA TCTCCCGCCT GGTACGAGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCA GTCAGTGATG AGATCCTCGA GGTCAATGGC ATTGAGGTAG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATTG TCACTGTCAA GCCAGCCAAT CAGCGCAATA ATGTGGTGCG TGGGGCATCT GGGCGTCTGG CAGGGCCTCC TTCTGCTGGG CCTGCTGAGC CTGACAGCGA TGATGACAGC AGCGATCTGG TCATTGAGAA CCGCCAGCCT CCCTGTTCCA ATGGGCTGTC TCAAGGGCCT CCATGCTGGG ACCTGCACAC TAGCCACCTA CTTCCTGCTG CCCGCAGCTC TCTGCCCTCC CTGGATGATC GGGAGCAGGC CAGCTCTGGT TGGGGGAGTA GCATTCGAGG AGATGGTAGT GGCTTCAGCC TCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001039739.1 |
CDS | 189..1223 |
Translation | |
Target ORF information:
RefSeq Version | NM_001046274.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus par-6 family cell polarity regulator alpha (PARD6A), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001046274.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGCCAGGC CACAGAGGAC TCCAGCACGC AGTCCCGACA GCATCGTCGA GGTGAAGAGC AAATTTGATG CTGAGTTCCG ACGCTTTGCT CTGCCTCGCG CTTCAGTGAG CGGCTTCCAG GAGTTTTCTC GGTTGCTGCG TGCAGTACAC CAGATCCCGG GCCTGGACGT GCTGCTTGGC TATACTGATG CTCACGGCGA CCTACTACCC CTCACCAACG ACGACAGCCT GCACCGGGCC CTGTCCAGCG GGCCCCCACC ACTGCGCCTG CTAGTGCAGA AGCGGGCAGA AGCTGATTCC AGTGGCCTGG CCTTTGCCTC CAACTCTCTG CAACGGCGCA AGAAAGGGCT CCTACTTCGG CCAGTGGCAC CCCTGCGCAC CCGGCCACCG CTACTGATCA GCCTGCCACA AGATTTCCGC CAGGTTTCTT CAGTCATAGA TGTGGACCTA CTGCCTGAGA CCCATCGACG GGTGCGGCTA CATAAGCATG GTTCCGACCG CCCCCTGGGT TTCTACATCC GAGATGGCAT GAGCGTGCGA GTAGCTCCCC AGGGCCTGGA ACGGGTTCCA GGCATCTTCA TCTCCCGCCT GGTACGAGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCA GTCAGTGATG AGATCCTCGA GGTCAATGGC ATTGAGGTAG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATTG TCACTGTCAA GCCAGCCAAT CAGCGCAATA ATGTGGTGCG TGGGGCATCT GGGCGTCTGG CAGGGCCTCC TTCTGCTGGG CCTGCTGAGC CTGACAGCGA TGATGACAGC AGCGATCTGG TCATTGAGAA CCGCCAGCCT CCCTGTTCCA ATGGGCTGTC TCAAGGGCCT CCATGCTGGG ACCTGCACAC TAGCCACCTA CTTCCTGCTG CCCGCAGCTC TCTGCCCTCC CTGGATGATC GGGAGCAGGC CAGCTCTGGT TGGGGGAGTA GCATTCGAGG AGATGGTAGT GGCTTCAGCC TCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa225053 |
Clone ID Related Accession (Same CDS sequence) |
XM_024978302.1
|
Accession Version |
XM_024978302.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
partitioning defective 6 homolog alpha isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGCCAGGC CACAGAGGAC TCCAGCACGC AGTCCCGACA GCATCGTCGA GGTGAAGAGC AAATTTGATG CTGAGTTCCG ACGCTTTGCT CTGCCTCGCG CTTCAGTGAG CGGCTTCCAG GAGTTTTCTC GGTTGCTGCG TGCAGTACAC CAGATCCCGG GCCTGGACGT GCTGCTTGGC TATACTGATG CTCACGGCGA CCTACTACCC CTCACCAACG ACGACAGCCT GCACCGGGCC CTGTCCAGCG GGCCCCCACC ACTGCGCCTG CTAGTGCAGA AGCGGGAAGC TGATTCCAGT GGCCTGGCCT TTGCCTCCAA CTCTCTGCAA CGGCGCAAGA AAGGGCTCCT ACTTCGGCCA GTGGCACCCC TGCGCACCCG GCCACCGCTA CTGATCAGCC TGCCACAAGA TTTCCGCCAG GTTTCTTCAG TCATAGATGT GGACCTACTG CCTGAGACCC ATCGACGGGT GCGGCTACAT AAGCATGGTT CCGACCGCCC CCTGGGTTTC TACATCCGAG ATGGCATGAG CGTGCGAGTA GCTCCCCAGG GCCTGGAACG GGTTCCAGGC ATCTTCATCT CCCGCCTGGT ACGAGGGGGC CTGGCTGAGA GTACAGGGCT GCTGGCAGTC AGTGATGAGA TCCTCGAGGT CAATGGCATT GAGGTAGCCG GGAAGACCTT GGACCAAGTG ACGGACATGA TGGTCGCCAA CAGCCACAAC CTCATTGTCA CTGTCAAGCC AGCCAATCAG CGCAATAATG TGGTGCGTGG GGCATCTGGG CGTCTGGCAG GGCCTCCTTC TGCTGGGCCT GCTGAGCCTG ACAGCGATGA TGACAGCAGC GATCTGGTCA TTGAGAACCG CCAGCCTCCC TGTTCCAATG GGCTGTCTCA AGGGCCTCCA TGCTGGGACC TGCACACTAG CCGCCTACTT CCTGCTGCCC GCAGCTCTCT GCCCTCCCTG GATGATCGGG AGCAGGCCAG CTCTGGTTGG GGGAGTAGCA TTCGAGGAGA TGGTAGTGGC TTCAGCCTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024834070.1 |
CDS | 73..1104 |
Translation | |
Target ORF information:
RefSeq Version | XM_024978302.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus par-6 family cell polarity regulator alpha (PARD6A), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024978302.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021
| ATGGCCAGGC CACAGAGGAC TCCAGCACGC AGTCCCGACA GCATCGTCGA GGTGAAGAGC AAATTTGATG CTGAGTTCCG ACGCTTTGCT CTGCCTCGCG CTTCAGTGAG CGGCTTCCAG GAGTTTTCTC GGTTGCTGCG TGCAGTACAC CAGATCCCGG GCCTGGACGT GCTGCTTGGC TATACTGATG CTCACGGCGA CCTACTACCC CTCACCAACG ACGACAGCCT GCACCGGGCC CTGTCCAGCG GGCCCCCACC ACTGCGCCTG CTAGTGCAGA AGCGGGAAGC TGATTCCAGT GGCCTGGCCT TTGCCTCCAA CTCTCTGCAA CGGCGCAAGA AAGGGCTCCT ACTTCGGCCA GTGGCACCCC TGCGCACCCG GCCACCGCTA CTGATCAGCC TGCCACAAGA TTTCCGCCAG GTTTCTTCAG TCATAGATGT GGACCTACTG CCTGAGACCC ATCGACGGGT GCGGCTACAT AAGCATGGTT CCGACCGCCC CCTGGGTTTC TACATCCGAG ATGGCATGAG CGTGCGAGTA GCTCCCCAGG GCCTGGAACG GGTTCCAGGC ATCTTCATCT CCCGCCTGGT ACGAGGGGGC CTGGCTGAGA GTACAGGGCT GCTGGCAGTC AGTGATGAGA TCCTCGAGGT CAATGGCATT GAGGTAGCCG GGAAGACCTT GGACCAAGTG ACGGACATGA TGGTCGCCAA CAGCCACAAC CTCATTGTCA CTGTCAAGCC AGCCAATCAG CGCAATAATG TGGTGCGTGG GGCATCTGGG CGTCTGGCAG GGCCTCCTTC TGCTGGGCCT GCTGAGCCTG ACAGCGATGA TGACAGCAGC GATCTGGTCA TTGAGAACCG CCAGCCTCCC TGTTCCAATG GGCTGTCTCA AGGGCCTCCA TGCTGGGACC TGCACACTAG CCGCCTACTT CCTGCTGCCC GCAGCTCTCT GCCCTCCCTG GATGATCGGG AGCAGGCCAG CTCTGGTTGG GGGAGTAGCA TTCGAGGAGA TGGTAGTGGC TTCAGCCTCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |