spoplb cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	spoplb
Entrez Gene ID	558170
Full Name	speckle-type POZ protein-like b
Synonyms	im:6961637,zgc:153365
General protein information	Preferred Names speckle-type POZ protein-like b Names speckle-type POZ protein-like B HIB homolog 3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001079969.1	NP_001073438.1	speckle-type POZ protein-like B

Pathways from BioSystems

Homologies

Oryza sativa (rice)	Os07g0101400	NP_001058677.1
Xenopus tropicalis (tropical clawed frog)	spopl	XP_004912786.1
Danio rerio (zebrafish)	spoplb	NP_001073438.1
Arabidopsis thaliana (thale cress)	BPM3	NP_030522.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A hedgehog-induced BTB protein modulates hedgehog signaling by degrading Ci/Gli transcription factor.
Zhang Q, Zhang L, Wang B, Ou CY, Chien CT, Jiang J
Developmental cell10(6)719-29(2006 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following spoplb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the spoplb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa38634	NM_001079969.1 Latest version!	Danio rerio speckle type BTB/POZ protein like b (spoplb), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

spoplb ( NM_001079969.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001073438.1 Danio rerio speckle type BTB/POZ protein like b (spoplb), mRNA.

Price & Availability↑

CloneID	ODa38634
Clone ID Related Accession (Same CDS sequence)	NM_001079969.1
Accession Version	NM_001079969.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1143bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-08
Organism	Danio rerio(zebrafish)
Product	speckle-type POZ protein-like B
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125865.1. On Mar 11, 2007 this sequence version replaced XM_681356.2. ##Evidence-Data-START## Transcript exon combination :: BC125865.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGACATCCG GACCTGTGGC GGAGAGCTGG TGTTACACAC AGGTGAAAGT TGTAAAATTT 
TCTTATATGT GGACGATTAA CAACTTCAGC TTCTGTCGGG AGGAGATGGG AGAAGTCGTG 
AGGAGCTCAA CCTTCTCTTC AGGCCCCAAC GACAAGATGA AATGGTGTTT GCGAGTGAAC 
CCAAAGGGTC TGGATGACGA GAGTAAAGAT TACCTCTCAC TGTATTTACT GCTTGTCAGC 
TGCCCAAAAA GCGAAGTAAG AGCAAAGTTC AAGTTTTCTT TACTGAACGC CAAAAGAGAA 
GAAACTAAAG CCATGGAAAG CCAAAGAGCC TACCGCTTCG TCCAGGGAAA GGATTGGGGC 
TTCAAGAAGT TCATTAGGAG AGACTTCTTG CTGGATGAAG CAAACGGACT TCTTCCTGAT 
GACAAGCTCA CTCTGTTCTG TGAGGTGAGC GTGGTTCAAG ACTCTGTGAA CATCTCTGGC 
CAGTCGAACA CAAACATGCT GAAAGTCCCC GAGTGCCAGC TTTCAGATGA TCTGGGCAAT 
CTGTGGGAAG GCTCCAGGTT CACTGACTGC AGTCTGTTTG TTGGAGGACA AGAGTTCAAA 
GCGCACAAAT CCATCCTGGC AGCGAGGTCG CCAGTATTCA ATGCCATGTT TGAACACAAA 
ATGGAGGAGA GTAAAAAAAA CCGTGTAGAC ATCAGTGACG TAGAGCCAGA TGTGTTTCGG 
GAAATGATGG TATTTATTTA CACTGGTAAA GCTCCCAACC TGGAGAAAAT GGCCGACAAC 
CTGTTAGCTG CCGCAGACAA GTACGCTCTG GAGAGACTGA AGGTATTGTG TGAGGAGGCA 
CTGTGTAATA GTCTGTCTGT GGAGAACGTG GCTGATGTCC TCATTCTGGC GGATCTGCAC 
AGCGCAGAGC AGCTCAAAGC ACAAGCCATA GACTTCATCA ACCGATGCAG CGTTCTTCGA 
CAGCTCGGCT GTAAAGATGG CAAGAACTGG AATAGCAATC ACGCCGCAGA CATAATGGAA 
ACGGCAGGCT GGAAAGCCAT GATTCAATCC CATCCTCACT TAGTAGCCGA GGCGTTCCGC 
GCTCTGGCTT CAGCCCAGTG CACACCATTC GGCCTGCCTC GAAAACGCCT AAAACAATCC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001073438.1
CDS	394..1536
Translation	MTSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNMLKVPECQLSDDLGNLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEKMADNLLAAADKYALERLKVLCEEALCNSLSVENVADVLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALASAQCTPFGLPRKRLKQS

Target ORF information:

RefSeq Version	NM_001079969.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio speckle type BTB/POZ protein like b (spoplb), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001079969.1

ORF Insert Sequence:

ATGACATCCG GACCTGTGGC GGAGAGCTGG TGTTACACAC AGGTGAAAGT TGTAAAATTT 
TCTTATATGT GGACGATTAA CAACTTCAGC TTCTGTCGGG AGGAGATGGG AGAAGTCGTG 
AGGAGCTCAA CCTTCTCTTC AGGCCCCAAC GACAAGATGA AATGGTGTTT GCGAGTGAAC 
CCAAAGGGTC TGGATGACGA GAGTAAAGAT TACCTCTCAC TGTATTTACT GCTTGTCAGC 
TGCCCAAAAA GCGAAGTAAG AGCAAAGTTC AAGTTTTCTT TACTGAACGC CAAAAGAGAA 
GAAACTAAAG CCATGGAAAG CCAAAGAGCC TACCGCTTCG TCCAGGGAAA GGATTGGGGC 
TTCAAGAAGT TCATTAGGAG AGACTTCTTG CTGGATGAAG CAAACGGACT TCTTCCTGAT 
GACAAGCTCA CTCTGTTCTG TGAGGTGAGC GTGGTTCAAG ACTCTGTGAA CATCTCTGGC 
CAGTCGAACA CAAACATGCT GAAAGTCCCC GAGTGCCAGC TTTCAGATGA TCTGGGCAAT 
CTGTGGGAAG GCTCCAGGTT CACTGACTGC AGTCTGTTTG TTGGAGGACA AGAGTTCAAA 
GCGCACAAAT CCATCCTGGC AGCGAGGTCG CCAGTATTCA ATGCCATGTT TGAACACAAA 
ATGGAGGAGA GTAAAAAAAA CCGTGTAGAC ATCAGTGACG TAGAGCCAGA TGTGTTTCGG 
GAAATGATGG TATTTATTTA CACTGGTAAA GCTCCCAACC TGGAGAAAAT GGCCGACAAC 
CTGTTAGCTG CCGCAGACAA GTACGCTCTG GAGAGACTGA AGGTATTGTG TGAGGAGGCA 
CTGTGTAATA GTCTGTCTGT GGAGAACGTG GCTGATGTCC TCATTCTGGC GGATCTGCAC 
AGCGCAGAGC AGCTCAAAGC ACAAGCCATA GACTTCATCA ACCGATGCAG CGTTCTTCGA 
CAGCTCGGCT GTAAAGATGG CAAGAACTGG AATAGCAATC ACGCCGCAGA CATAATGGAA 
ACGGCAGGCT GGAAAGCCAT GATTCAATCC CATCCTCACT TAGTAGCCGA GGCGTTCCGC 
GCTCTGGCTT CAGCCCAGTG CACACCATTC GGCCTGCCTC GAAAACGCCT AAAACAATCC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A hedgehog-induced BTB protein modulates hedgehog signaling by degrading Ci/Gli transcription factor.
Developmental cell10(6)719-29(2006 Jun)
Zhang Q,Zhang L,Wang B,Ou CY,Chien CT,Jiang J