Gene Symbol | rpusd1 |
Entrez Gene ID | 767786 |
Full Name | RNA pseudouridylate synthase domain containing 1 |
Synonyms | wu:fe26f08,zgc:153465 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » rpusd1 cDNA ORF clone
Gene Symbol | rpusd1 |
Entrez Gene ID | 767786 |
Full Name | RNA pseudouridylate synthase domain containing 1 |
Synonyms | wu:fe26f08,zgc:153465 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017354591.1 | XP_017210080.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 |
XM_009299556.2 | XP_009297831.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 |
NM_001076753.1 | NP_001070221.1 | RNA pseudouridylate synthase domain-containing protein 1 |
XM_017354591.2 | XP_017210080.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 |
Pan troglodytes (chimpanzee) | RPUSD1 | XP_510721.3 |
Canis lupus familiaris (dog) | RPUSD1 | XP_005621794.1 |
Gallus gallus (chicken) | RPUSD1 | XP_003642166.1 |
Mus musculus (house mouse) | Rpusd1 | NP_082285.1 |
Rattus norvegicus (Norway rat) | Rpusd1 | NP_001099244.1 |
Xenopus tropicalis (tropical clawed frog) | rpusd1 | XP_002935894.1 |
Homo sapiens (human) | RPUSD1 | NP_478072.1 |
Bos taurus (cattle) | RPUSD1 | NP_001069342.1 |
Danio rerio (zebrafish) | rpusd1 | NP_001070221.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004401 | XP_313685.5 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following rpusd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rpusd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa38215 | |
Clone ID Related Accession (Same CDS sequence) | NM_001076753.1 | |
Accession Version | NM_001076753.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124362.1. ##Evidence-Data-START## Transcript exon combination :: BC124362.1, AW128657.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGAGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001070221.1 |
CDS | 225..1106 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001076753.1 |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGAGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017354591.1 , XM_009299556.2 , XM_017354591.2 | |
Accession Version | XM_017354591.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017210080.1 |
CDS | 306..1187 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017354591.1 |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017354591.1 , XM_009299556.2 , XM_017354591.2 | |
Accession Version | XM_009299556.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299556.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009297831.1 |
CDS | 277..1158 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299556.2 |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017354591.1 , XM_009299556.2 , XM_017354591.2 | |
Accession Version | XM_017354591.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017354591.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017210080.1 |
CDS | 309..1190 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017354591.2 |
1 | ATGGAGCCTG CGAGCCTGGA AAACCTGTGT GTTTTGTATC AAAGTACAAA CTATATAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
Hematopoietic gene expression profile in zebrafish kidney marrow. |