HLH3B cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	HLH3B
Entrez Gene ID	31249
Full Name	Helix loop helix protein 3B
Synonyms	CG2655,Dmel\CG2655,DroSCL,EG:155E2.2,HLH3b,bHLHa20
General protein information	Preferred Names Helix loop helix protein 3B Names CG2655 gene product from transcript CG2655-RA CG2655-PA HLH3B-PA helix loop helix protein 3B
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 3B1-3B1

mRNA and Protein(s)

mRNA	Protein	Name
NM_080316.2	NP_525055.1	helix loop helix protein 3B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following HLH3B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HLH3B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa00627	NM_080316.2 Latest version!	Drosophila melanogaster helix loop helix protein 3B (HLH3B), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HLH3B ( NM_080316.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_525055.1 Drosophila melanogaster helix loop helix protein 3B (HLH3B), mRNA.

Price & Availability↑

CloneID	OFa00627
Clone ID Related Accession (Same CDS sequence)	NM_080316.2
Accession Version	NM_080316.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1131bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	helix loop helix protein 3B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Dec 17, 2009 this sequence version replaced NM_080316.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTGGC TACCGAGCAG CTCGAACGGA GCGGATAACG CGGACGAACG GAGCACCGCC 
TCGAGCGGAT CCTCCGGCCA CAGCCAGACC AACGAGTCAC CGCGATCCGG GCACCTGAAC 
GGTAATGGTA GCATGCGGGA CACTGCCGCT GGCAGGCATC CGCCCGCCCT GCTCCGACAT 
GCCACGCCCC ACCTGCAGCC CAAGACGGAG TCCATATCCG ATGGAGACGG TGACGCGGAG 
CTTTCCGACT TCTCGCTCAA CGACACGGAG GAGGACGAGG AGGATCTTCG CGATTACATC 
GTTCTGAATG GCAACCAGGC GGATGCGAAT CGCTCACTGT CCAGTTCGCC GCGCAGTCAC 
TCCCGCAACG GACTGCTGAC CGCGCCGGCC AGCTCCGGAA GCTCAGTCGG CGGTAGCGGC 
GGTGGTGGAG GCAATGGCTC CGGCGGCAAT GCATCCAGTG GCGGCGGCAG CGGCGTAGGA 
GCCACCGGCG GTGTGCGCAA GGTGTTCACC AACACAAGGG AGCGATGGCG CCAGCAGAAC 
GTGTCCGGTG CCTTTGCAGA GCTGCGCAAG CTGGTGCCCA CACATCCGCC GGACAAGAAG 
CTATCGAAGA ACGAGATCCT GCGCTCGGCC ATTAAGTACA TTAAGCTGCT GACGGGCATC 
CTCGAGTGGC AGCAGCGGCA GGCGCCCTCG CATCCGATCA GGGCTCAAAT GGAGCCGAAC 
AACAACGACA ATAGGATGGC CAATGGCCAT GCGGCGGACG GGGAGAATCT GGAGAATCCA 
GATGTTCCGC CTGTACGGCA CATCAAGTGT GAACGCACCG ACGGGCAGAT GCACAGGAAT 
GGCATTGGGC ACGGACATGC CAACGGAAAC GCTGGCAACG ACCTGCTGAT GATTGCCCCG 
GGAGCCGTTG TCAAAAGCGA GCTTCTCCTG GAGTCTACAC TCCCACTTGG GCATCCGTTA 
AACGGCCCAC CCCTGCCGTT GACCACTGCT CCGCTGGCCA TGGCCGAGAC TCAGCGAATC 
AGTGGCACCG TATCCGGTGT AAAATCGGCC AGCGGACGGA GTAGCAAGCG ACGCCTCAAG 
CCGGAAGGCG GAGCCACCGA TCTCAGTCTG GGCAAACGGC GCAGGACGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_525055.1
CDS	66..1196
Translation	MAWLPSSSNGADNADERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPHLQPKTESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCERTDGQMHRNGIGHGHANGNAGNDLLMIAPGAVVKSELLLESTLPLGHPLNGPPLPLTTAPLAMAETQRISGTVSGVKSASGRSSKRRLKPEGGATDLSLGKRRRT

Target ORF information:

RefSeq Version	NM_080316.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster helix loop helix protein 3B (HLH3B), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_080316.2

ORF Insert Sequence:

ATGGCCTGGC TACCGAGCAG CTCGAACGGA GCGGATAACG CGGACGAACG GAGCACCGCC 
TCGAGCGGAT CCTCCGGCCA CAGCCAGACC AACGAGTCAC CGCGATCCGG GCACCTGAAC 
GGTAATGGTA GCATGCGGGA CACTGCCGCT GGCAGGCATC CGCCCGCCCT GCTCCGACAT 
GCCACGCCCC ACCTGCAGCC CAAGACGGAG TCCATATCCG ATGGAGACGG TGACGCGGAG 
CTTTCCGACT TCTCGCTCAA CGACACGGAG GAGGACGAGG AGGATCTTCG CGATTACATC 
GTTCTGAATG GCAACCAGGC GGATGCGAAT CGCTCACTGT CCAGTTCGCC GCGCAGTCAC 
TCCCGCAACG GACTGCTGAC CGCGCCGGCC AGCTCCGGAA GCTCAGTCGG CGGTAGCGGC 
GGTGGTGGAG GCAATGGCTC CGGCGGCAAT GCATCCAGTG GCGGCGGCAG CGGCGTAGGA 
GCCACCGGCG GTGTGCGCAA GGTGTTCACC AACACAAGGG AGCGATGGCG CCAGCAGAAC 
GTGTCCGGTG CCTTTGCAGA GCTGCGCAAG CTGGTGCCCA CACATCCGCC GGACAAGAAG 
CTATCGAAGA ACGAGATCCT GCGCTCGGCC ATTAAGTACA TTAAGCTGCT GACGGGCATC 
CTCGAGTGGC AGCAGCGGCA GGCGCCCTCG CATCCGATCA GGGCTCAAAT GGAGCCGAAC 
AACAACGACA ATAGGATGGC CAATGGCCAT GCGGCGGACG GGGAGAATCT GGAGAATCCA 
GATGTTCCGC CTGTACGGCA CATCAAGTGT GAACGCACCG ACGGGCAGAT GCACAGGAAT 
GGCATTGGGC ACGGACATGC CAACGGAAAC GCTGGCAACG ACCTGCTGAT GATTGCCCCG 
GGAGCCGTTG TCAAAAGCGA GCTTCTCCTG GAGTCTACAC TCCCACTTGG GCATCCGTTA 
AACGGCCCAC CCCTGCCGTT GACCACTGCT CCGCTGGCCA TGGCCGAGAC TCAGCGAATC 
AGTGGCACCG TATCCGGTGT AAAATCGGCC AGCGGACGGA GTAGCAAGCG ACGCCTCAAG 
CCGGAAGGCG GAGCCACCGA TCTCAGTCTG GGCAAACGGC GCAGGACGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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HLH3B cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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