Rh7 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rh7
Entrez Gene ID	39389
Full Name	Rhodopsin 7
Synonyms	CG5638,DMELRH7,Dmel\CG5638,Rh,anon-WO0170980.34,anon-WO0170980.35,rh7
General protein information	Preferred Names Rhodopsin 7 Names CG5638 gene product from transcript CG5638-RA CG5638-PA Rh7-PA rhodopsin rhodopsin 7
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 68F8-69A1

mRNA and Protein(s)

mRNA	Protein	Name
NM_079311.3	NP_524035.2	rhodopsin 7

Pathways from BioSystems

Homologies

Anopheles gambiae (African malaria mosquito)	GPROP10	XP_308329.4
Drosophila melanogaster (fruit fly)	Rh7	NP_524035.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The demonstration that Rh7 functions in circadian pacemaker neurons represents, to our knowledge, the first role for an opsin in the central brain.
Title: A rhodopsin in the brain functions in circadian photoentrainment in Drosophila.

The following Rh7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rh7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18325	NM_079311.3 Latest version!	Drosophila melanogaster rhodopsin 7 (Rh7), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rh7 ( NM_079311.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524035.2 Drosophila melanogaster rhodopsin 7 (Rh7), mRNA.

Price & Availability↑

CloneID	OFa18325
Clone ID Related Accession (Same CDS sequence)	NM_079311.3
Accession Version	NM_079311.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1452bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	rhodopsin 7
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_079311.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGGCCA TCATCATGAC GACCCTGCCC AACCTGACAA CGGATGCAGG TGACAGCAGC 
TTCTGGCTAA CCGGTGCCCT CTCGCTCTCC GAGATGTTGG CCAACTCGAG CCACAGCCAT 
TCCACTGGGA GCACAACCTC GACGGCTGGG AGTTCGGCCA CCGAATCATC CGCTGTGAAT 
GTAGGCAAGG ACCACGACAA GCACGTGAAT GACAGCGTTT CCACGGGTCT GAGCAATTAC 
AGTAATTACC CCAGCTACAT TCACTACAGG GACAAGTACG ACCTGAGCTA CATTGCCAAG 
GTGAATCCCT TTTGGCTACA GTTCGAGCCA CCTAAGTCGA GCACCTTCCT GATTATGGCC 
GCCCTGTATT GCCTGATTTC GGTGGTGGGA TGTGTGGGCA ATGCGTTCGT CATCTTTATG 
TTTGCCAACC GCAAATCTCT GCGGACTCCT GCCAATATCC TGGTGATGAA TCTGGCCATC 
TGCGACTTTC TGATGCTCAT CAAATGCCCG ATTGCCATTT ACAATAACAT CAAAGAGGGT 
CCAGCTTTAG GAGACATTGC CTGTCGCCTC TATGGATTTG TGGGTGGCCT AAGTGGCACC 
TGTGCCATCG GTACCCTCAC CGCCATCGCT TTGGATCGGT ACAATGTGGT GGTGCATCCA 
CTGCAACCGC TGAGACGCTG CTCCCGCCTG CGATCCTACC TGATCATCCT GCTGATCTGG 
TGCTACAGCT TCCTGTTCGC TGTGATGCCG GCCCTGGATA TCGGACTATC TGTCTATGTG 
CCAGAGGGCT TCCTCACCAC CTGCAGCTTC GATTATCTGA ACAAGGAGAT GCCAGCTCGC 
ATTTTCATGG CACTGTTCTT TGTGGCTGCC TACTGCATTC CACTGACCTC CATTGTGTAC 
TCCTACTTCT ATATACTGAA GGTGGTCTTC ACAGCGAGTC GAATACAATC GAACAAGGAT 
AAGGCCAAGA CGGAGCAGAA GTTGGCCTTC ATTGTGGCGG CTATCATTGG TTTGTGGTTC 
CTGGCCTGGT CACCGTACGC CATCGTTGCC ATGATGGGTG TCTTCGGCCT GGAGAGGCAC 
ATAACGCCAC TGGGATCGAT GATACCCGCG CTCTTCTGCA AGACAGCTGC CTGCGTGGAT 
CCCTACTTGT ATGCGGCCAC CCATCCGCGG TTTCGTGTCG AGGTGCGAAT GCTCTTCTAC 
GGACGCGGAG TGCTGCGAAG GGTCTCCACG ACCAGATCAT CGTACATGAC CCGATCACGA 
TCGTCGTTCA CCCACCGATT GAGGACGAGC ACCACCGGTG AGGGCGGAAT GGGTGATCAC 
CGCATGGAAA ACTATCTGAT GAACAACAAT CTGATGATGG TGCCCGAGGA GACGGAGGAG 
AACGAGGAGA TCGTTGTGGT GGCCGAGATC AACAATTCGA TTAGCAGCGT CATGGAACAG 
AGTAAGTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524035.2
CDS	786..2237
Translation	MEAIIMTTLPNLTTDAGDSSFWLTGALSLSEMLANSSHSHSTGSTTSTAGSSATESSAVNVGKDHDKHVNDSVSTGLSNYSNYPSYIHYRDKYDLSYIAKVNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCIPLTSIVYSYFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHRLRTSTTGEGGMGDHRMENYLMNNNLMMVPEETEENEEIVVVAEINNSISSVMEQSKF

Target ORF information:

RefSeq Version	NM_079311.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster rhodopsin 7 (Rh7), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079311.3

ORF Insert Sequence:

ATGGAGGCCA TCATCATGAC GACCCTGCCC AACCTGACAA CGGATGCAGG TGACAGCAGC 
TTCTGGCTAA CCGGTGCCCT CTCGCTCTCC GAGATGTTGG CCAACTCGAG CCACAGCCAT 
TCCACTGGGA GCACAACCTC GACGGCTGGG AGTTCGGCCA CCGAATCATC CGCTGTGAAT 
GTAGGCAAGG ACCACGACAA GCACGTGAAT GACAGCGTTT CCACGGGTCT GAGCAATTAC 
AGTAATTACC CCAGCTACAT TCACTACAGG GACAAGTACG ACCTGAGCTA CATTGCCAAG 
GTGAATCCCT TTTGGCTACA GTTCGAGCCA CCTAAGTCGA GCACCTTCCT GATTATGGCC 
GCCCTGTATT GCCTGATTTC GGTGGTGGGA TGTGTGGGCA ATGCGTTCGT CATCTTTATG 
TTTGCCAACC GCAAATCTCT GCGGACTCCT GCCAATATCC TGGTGATGAA TCTGGCCATC 
TGCGACTTTC TGATGCTCAT CAAATGCCCG ATTGCCATTT ACAATAACAT CAAAGAGGGT 
CCAGCTTTAG GAGACATTGC CTGTCGCCTC TATGGATTTG TGGGTGGCCT AAGTGGCACC 
TGTGCCATCG GTACCCTCAC CGCCATCGCT TTGGATCGGT ACAATGTGGT GGTGCATCCA 
CTGCAACCGC TGAGACGCTG CTCCCGCCTG CGATCCTACC TGATCATCCT GCTGATCTGG 
TGCTACAGCT TCCTGTTCGC TGTGATGCCG GCCCTGGATA TCGGACTATC TGTCTATGTG 
CCAGAGGGCT TCCTCACCAC CTGCAGCTTC GATTATCTGA ACAAGGAGAT GCCAGCTCGC 
ATTTTCATGG CACTGTTCTT TGTGGCTGCC TACTGCATTC CACTGACCTC CATTGTGTAC 
TCCTACTTCT ATATACTGAA GGTGGTCTTC ACAGCGAGTC GAATACAATC GAACAAGGAT 
AAGGCCAAGA CGGAGCAGAA GTTGGCCTTC ATTGTGGCGG CTATCATTGG TTTGTGGTTC 
CTGGCCTGGT CACCGTACGC CATCGTTGCC ATGATGGGTG TCTTCGGCCT GGAGAGGCAC 
ATAACGCCAC TGGGATCGAT GATACCCGCG CTCTTCTGCA AGACAGCTGC CTGCGTGGAT 
CCCTACTTGT ATGCGGCCAC CCATCCGCGG TTTCGTGTCG AGGTGCGAAT GCTCTTCTAC 
GGACGCGGAG TGCTGCGAAG GGTCTCCACG ACCAGATCAT CGTACATGAC CCGATCACGA 
TCGTCGTTCA CCCACCGATT GAGGACGAGC ACCACCGGTG AGGGCGGAAT GGGTGATCAC 
CGCATGGAAA ACTATCTGAT GAACAACAAT CTGATGATGG TGCCCGAGGA GACGGAGGAG 
AACGAGGAGA TCGTTGTGGT GGCCGAGATC AACAATTCGA TTAGCAGCGT CATGGAACAG 
AGTAAGTTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rh7 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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