Tapdelta cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tapdelta
Entrez Gene ID	45680
Full Name	Translocon-associated protein delta
Synonyms	BcDNA:GM12291,CG9035,Dmel\CG9035,TRAPdelta,l(2)k17005
General protein information	Preferred Names Translocon-associated protein delta Names CG9035 gene product from transcript CG9035-RB CG9035-PA CG9035-PB Tapdelta-PA Tapdelta-PB
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 47F7-47F7

mRNA and Protein(s)

mRNA	Protein	Name
NM_001299386.1	NP_001286315.1	Translocon-associated protein delta, isoform B
NM_136835.4	NP_610679.1	Translocon-associated protein delta, isoform A

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	ssr4	NP_001002082.1
Xenopus tropicalis (tropical clawed frog)	ssr4	XP_002937920.2
Canis lupus familiaris (dog)	SSR4	NP_001191685.1
Bos taurus (cattle)	SSR4	NP_001033592.1
Rattus norvegicus (Norway rat)	Ssr4	NP_058895.1
Drosophila melanogaster (fruit fly)	Tapdelta	NP_610679.1
Caenorhabditis elegans (roundworm)	trap-4	NP_499554.1
Homo sapiens (human)	SSR4	NP_001191455.1
Pan troglodytes (chimpanzee)	SSR4	XP_521325.3
	SSR4	XP_001086913.2
Mus musculus (house mouse)	Ssr4	NP_033305.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tapdelta gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tapdelta cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa12712	NM_136835.4 Latest version!	Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa12712	NM_001299386.1 Latest version!	Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tapdelta ( NM_001299386.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286315.1 Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa12712
Clone ID Related Accession (Same CDS sequence)	NM_001299386.1 , NM_136835.4
Accession Version	NM_001299386.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 501bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Translocon-associated protein delta, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCCGTC AACTGTTCGC CATTTGCCTG ATTGCCGCCG TTTGTGCGTC CGGCGTCTAC 
GGTAGCTGCA AGGCCACCGT GAGCTCTTTC AGCACCCAGG ATGCCACGAT TCTGACCCAG 
CTGGCCCATG TGGGCGAGTT CACGCTGCAG TGCAGCGGAG CCGCTCCCGC CAGCCTGTTC 
GCCGAGTTCC CCTGCGGCAA GGTGGTGCCG GTGGCCAAGG TGGGCGACAA CAAGTACCAG 
GTGAGCTGGG TGGAGGATAT CAAGCAGGGC AGCAGCGGCA ATGTTCAGGT GCGTCTCTTC 
GACGAGGATG GCTATGCCAA TGTGCGCAAG GCCCAGCGGG ATGGCGACAA GGTTTCATCG 
GTGAAGTCGC TGCTCGACAT TTCCGTGCCC ACCAAGGGTG CCTACAAGGG TCCCTGGATC 
AAGGCTGAGC TTTTGGCCGC CTTCTTGGTC GGCGGATTCG CATACTTCGC CTTCACCACC 
AAGGGCAAGG TGCAGTCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286315.1
CDS	324..824
Translation	MSRQLFAICLIAAVCASGVYGSCKATVSSFSTQDATILTQLAHVGEFTLQCSGAAPASLFAEFPCGKVVPVAKVGDNKYQVSWVEDIKQGSSGNVQVRLFDEDGYANVRKAQRDGDKVSSVKSLLDISVPTKGAYKGPWIKAELLAAFLVGGFAYFAFTTKGKVQS

Target ORF information:

RefSeq Version	NM_001299386.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299386.1

ORF Insert Sequence:

ATGTCCCGTC AACTGTTCGC CATTTGCCTG ATTGCCGCCG TTTGTGCGTC CGGCGTCTAC 
GGTAGCTGCA AGGCCACCGT GAGCTCTTTC AGCACCCAGG ATGCCACGAT TCTGACCCAG 
CTGGCCCATG TGGGCGAGTT CACGCTGCAG TGCAGCGGAG CCGCTCCCGC CAGCCTGTTC 
GCCGAGTTCC CCTGCGGCAA GGTGGTGCCG GTGGCCAAGG TGGGCGACAA CAAGTACCAG 
GTGAGCTGGG TGGAGGATAT CAAGCAGGGC AGCAGCGGCA ATGTTCAGGT GCGTCTCTTC 
GACGAGGATG GCTATGCCAA TGTGCGCAAG GCCCAGCGGG ATGGCGACAA GGTTTCATCG 
GTGAAGTCGC TGCTCGACAT TTCCGTGCCC ACCAAGGGTG CCTACAAGGG TCCCTGGATC 
AAGGCTGAGC TTTTGGCCGC CTTCTTGGTC GGCGGATTCG CATACTTCGC CTTCACCACC 
AAGGGCAAGG TGCAGTCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Tapdelta ( NM_136835.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_610679.1 Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa12712
Clone ID Related Accession (Same CDS sequence)	NM_001299386.1 , NM_136835.4
Accession Version	NM_136835.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 501bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Translocon-associated protein delta, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_136835.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCCGTC AACTGTTCGC CATTTGCCTG ATTGCCGCCG TTTGTGCGTC CGGCGTCTAC 
GGTAGCTGCA AGGCCACCGT GAGCTCTTTC AGCACCCAGG ATGCCACGAT TCTGACCCAG 
CTGGCCCATG TGGGCGAGTT CACGCTGCAG TGCAGCGGAG CCGCTCCCGC CAGCCTGTTC 
GCCGAGTTCC CCTGCGGCAA GGTGGTGCCG GTGGCCAAGG TGGGCGACAA CAAGTACCAG 
GTGAGCTGGG TGGAGGATAT CAAGCAGGGC AGCAGCGGCA ATGTTCAGGT GCGTCTCTTC 
GACGAGGATG GCTATGCCAA TGTGCGCAAG GCCCAGCGGG ATGGCGACAA GGTTTCATCG 
GTGAAGTCGC TGCTCGACAT TTCCGTGCCC ACCAAGGGTG CCTACAAGGG TCCCTGGATC 
AAGGCTGAGC TTTTGGCCGC CTTCTTGGTC GGCGGATTCG CATACTTCGC CTTCACCACC 
AAGGGCAAGG TGCAGTCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_610679.1
CDS	152..652
Translation	MSRQLFAICLIAAVCASGVYGSCKATVSSFSTQDATILTQLAHVGEFTLQCSGAAPASLFAEFPCGKVVPVAKVGDNKYQVSWVEDIKQGSSGNVQVRLFDEDGYANVRKAQRDGDKVSSVKSLLDISVPTKGAYKGPWIKAELLAAFLVGGFAYFAFTTKGKVQS

Target ORF information:

RefSeq Version	NM_136835.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Translocon-associated protein delta (Tapdelta), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_136835.4

ORF Insert Sequence:

ATGTCCCGTC AACTGTTCGC CATTTGCCTG ATTGCCGCCG TTTGTGCGTC CGGCGTCTAC 
GGTAGCTGCA AGGCCACCGT GAGCTCTTTC AGCACCCAGG ATGCCACGAT TCTGACCCAG 
CTGGCCCATG TGGGCGAGTT CACGCTGCAG TGCAGCGGAG CCGCTCCCGC CAGCCTGTTC 
GCCGAGTTCC CCTGCGGCAA GGTGGTGCCG GTGGCCAAGG TGGGCGACAA CAAGTACCAG 
GTGAGCTGGG TGGAGGATAT CAAGCAGGGC AGCAGCGGCA ATGTTCAGGT GCGTCTCTTC 
GACGAGGATG GCTATGCCAA TGTGCGCAAG GCCCAGCGGG ATGGCGACAA GGTTTCATCG 
GTGAAGTCGC TGCTCGACAT TTCCGTGCCC ACCAAGGGTG CCTACAAGGG TCCCTGGATC 
AAGGCTGAGC TTTTGGCCGC CTTCTTGGTC GGCGGATTCG CATACTTCGC CTTCACCACC 
AAGGGCAAGG TGCAGTCCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Tapdelta cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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