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ATG16L1 cDNA ORF clone, Homo sapiens(human)

Summary

Gene Symbol ATG16L1
Entrez Gene ID 55054
Full Name autophagy related 16 like 1
Synonyms APG16L,ATG16A,ATG16L,IBD10,WDR30
General protein information
Preferred Names

autophagy related 16 like 1

Names

autophagy-related protein 16-1
APG16L beta
ATG16 autophagy related 16-like 1
WD repeat domain 30
Gene Type protein-coding
Organism Homo sapiens(human)
Genome

2

2q37.1
Summary The protein encoded by this gene is part of a large protein complex that is necessary for autophagy, the major process by which intracellular components are targeted to lysosomes for degradation. Defects in this gene are a cause of susceptibility to inflammatory bowel disease type 10 (IBD10). Several transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Jun 2010].
Disorder MIM:

610767

Disorder Html: {Inflammatory bowel disease (Crohn disease) 10}, 611081 (3)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006712608.2 XP_006712671.1 autophagy-related protein 16-1 isoform X2
XM_005246084.2 XP_005246141.1 autophagy-related protein 16-1 isoform X3
NM_001190266.1 NP_001177195.1 autophagy-related protein 16-1 isoform 4
XM_005246082.2 XP_005246139.1 autophagy-related protein 16-1 isoform X1
NM_030803.6 NP_110430.5 autophagy-related protein 16-1 isoform 1
NM_198890.2 NP_942593.2 autophagy-related protein 16-1 isoform 3
NM_017974.3 NP_060444.3 autophagy-related protein 16-1 isoform 2
XM_005246086.2 XP_005246143.1 autophagy-related protein 16-1 isoform X4
NM_001190267.1 NP_001177196.1 autophagy-related protein 16-1 isoform 5

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) ATG16L1 XP_850664.1
Drosophila melanogaster (fruit fly) CG31033 NP_733313.2
Bos taurus (cattle) ATG16L1 NP_001178318.1
Rattus norvegicus (Norway rat) Atg16l1 NP_001102279.2
Xenopus tropicalis (tropical clawed frog) atg16l1 NP_001017343.1
Pan troglodytes (chimpanzee) ATG16L1 XP_001150112.1
Gallus gallus (chicken) ATG16L1 XP_004936997.1
Arabidopsis thaliana (thale cress) AT5G50230 NP_199834.2
Oryza sativa (rice) Os03g0746600 NP_001051251.1
Homo sapiens (human) ATG16L1 NP_110430.5
ATG16L1 XP_001114814.1
Mus musculus (house mouse) Atg16l1 NP_084122.2
Danio rerio (zebrafish) atg16l1 NP_001017854.1

Gene Ontology


Bibliography

Related articles in PubMed

Structure of the WD40-domain of human ATG16L1.
Bajagic M, Archna A, B?sing P, Scrima A
Protein science : a publication of the Protein Society26(9)1828-1837(2017 Sep)

Trimethylamine N-oxide prime NLRP3 inflammasome via inhibiting ATG16L1-induced autophagy in colonic epithelial cells.
Yue C, Yang X, Li J, Chen X, Zhao X, Chen Y, Wen Y
Biochemical and biophysical research communications490(2)541-551(2017 08)

Genetic analysis of the ATG16L1 gene promoter in sporadic Parkinson's disease.
Wang L, Huang J, Pang S, Qin X, Qi Z, Hawley RG, Yan B
Neuroscience letters64630-35(2017 Apr)

MicroRNA-410 regulates autophagy-related gene ATG16L1 expression and enhances chemosensitivity via autophagy inhibition in osteosarcoma.
Chen R, Li X, He B, Hu W
Molecular medicine reports15(3)1326-1334(2017 Mar)

Association of ATG16L1 gene haplotype with inflammatory bowel disease in Indians.
Pugazhendhi S, Baskaran K, Santhanam S, Ramakrishna BS
PloS one12(5)e0178291(2017)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Identified and present structure of the predicted WD40 domain boundaries of the autophagy-related protein 16-1 (ATG16L1).
Title: Structure of the WD40-domain of human ATG16L1.

The present results support the hypothesis that Trimethylamine N-oxide may be involved in the pathogenesis of inflammatory bowel disease by impacting ATG16L1-induced autophagy and activating NLRP3 inflammasome.
Title: Trimethylamine N-oxide prime NLRP3 inflammasome via inhibiting ATG16L1-induced autophagy in colonic epithelial cells.

the data suggested that genetic variants within the ATG16L1 gene promoter were not a risk factor for sporadic Parkinson's disease development
Title: Genetic analysis of the ATG16L1 gene promoter in sporadic Parkinson's disease.

MicroRNA-410 regulates autophagy-related gene ATG16L1 expression and enhances chemosensitivity via autophagy inhibition in osteosarcoma.(
Title: MicroRNA-410 regulates autophagy-related gene ATG16L1 expression and enhances chemosensitivity via autophagy inhibition in osteosarcoma.

Polymorphism in ATG16L1 gene is associated withinflammatory bowel disease.
Title: Association of ATG16L1 gene haplotype with inflammatory bowel disease in Indians.

The following ATG16L1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATG16L1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHu14570 NM_001190267.1
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK		 $204.50-$286.30
$409.00
OHu14614 NM_001190266.1
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK		 $219.50-$307.30
$439.00
OHu26895 NM_030803.6
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector
in pcDNA3.1+/C-(K)DYK		 $254.50-$356.30
$509.00
OHu15253 NM_198890.2
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $265.30
$379.00
OHu27102 NM_017974.3
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OHu36383 XM_005246082.2
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $307.30
$439.00
OHu36384 XM_006712608.2
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $307.30
$439.00
OHu36385 XM_005246084.2
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00
OHu36386 XM_005246086.2
Latest version!		 Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $223.30
$319.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OHu14570
Clone ID Related Accession (Same CDS sequence) NM_001190267.1
Accession Version NM_001190267.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1476bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags COA
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2017-12-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform 5
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB084962.1, AC013726.7, BC006253.2, BC000061.2, BC071846.1 and AA809053.1. Transcript Variant: This variant (5) uses an alternate splice junction at the 5' end of a coding exon compared to variant 1, that causes a frameshift. The resulting isoform (5) is shorter at the N-terminus compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## CDS exon combination :: SRR1660807.67529.1, SRR1803615.237511.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGCGGA AGGACAGGGA GATGCAGATG AATGAAGCAA AAATTGCAGA ATGTTTGCAG 
ACTATCTCTG ACCTGGAGAC GGAGTGCCTA GACCTGCGCA CTAAGCTTTG TGACCTTGAA 
AGAGCCAACC AGACCCTGAA GGATGAATAT GATGCCCTGC AGATCACTTT TACTGCCTTG 
GAGGGAAAAC TGAGGAAAAC TACGGAAGAG AACCAGGAGC TGGTCACCAG ATGGATGGCT 
GAGAAAGCCC AGGAAGCCAA TCGGCTTAAT GCAGAGAATG AAAAAGACTC CAGGAGGCGG 
CAAGCCCGGC TGCAGAAAGA GCTTGCAGAA GCAGCAAAGG AACCTCTACC AGTCGAACAG 
GATGATGACA TTGAGGTCAT TGTGGATGAA ACTTCTGATC ACACAGAAGA GACCTCTCCT 
GTGCGAGCCA TCAGCAGAGC AGCCACTAAG CGACTCTCGC AGCCTGCTGG AGGCCTTCTG 
GATTCTATCA CTAATATCTT TGGGAGACGC TCTGTCTCTT CCTTCCCAGT CCCCCAGGAC 
AATGTGGATA CTCATCCTGG TTCTGGTAAA GAAGTGAGGG TACCAGCTAC TGCCTTGTGT 
GTCTTCGATG CACATGATGG GGAAGTCAAC GCTGTGCAGT TCAGTCCAGG TTCCCGGTTA 
CTGGCCACTG GAGGCATGGA CCGCAGGGTT AAGCTTTGGG AAGTATTTGG AGAAAAATGT 
GAGTTCAAGG GTTCCCTATC TGGCAGTAAT GCAGGAATTA CAAGCATTGA ATTTGATAGT 
GCTGGATCTT ACCTCTTAGC AGCTTCAAAT GATTTTGCAA GCCGAATCTG GACTGTGGAT 
GATTATCGAT TACGGCACAC ACTCACGGGA CACAGTGGGA AAGTGCTGTC TGCTAAGTTC 
CTGCTGGACA ATGCGCGGAT TGTCTCAGGA AGTCACGACC GGACTCTCAA ACTCTGGGAT 
CTACGCAGCA AAGTCTGCAT AAAGACAGTG TTTGCAGGAT CCAGTTGCAA TGATATTGTC 
TGCACAGAGC AATGTGTAAT GAGTGGACAT TTTGACAAGA AAATTCGTTT CTGGGACATT 
CGATCAGAGA GCATAGTTCG AGAGATGGAG CTGTTGGGAA AGATTACTGC CCTGGACTTA 
AACCCAGAAA GGACTGAGCT CCTGAGCTGC TCCCGTGATG ACTTGCTAAA AGTTATTGAT 
CTCCGAACAA ATGCTATCAA GCAGACATTC AGTGCACCTG GGTTCAAGTG CGGCTCTGAC 
TGGACCAGAG TTGTCTTCAG CCCTGATGGC AGTTACGTGG CGGCAGGCTC TGCTGAGGGC 
TCTCTGTATA TCTGGAGTGT GCTCACAGGG AAAGTGGAAA AGGTTCTTTC AAAGCAGCAC 
AGCTCATCCA TCAATGCGGT GGCGTGGTCG CCCTCTGGCT CGCACGTTGT CAGTGTGGAC 
AAAGGATGCA AAGCTGTGCT GTGGGCACAG TACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001177196.1
CDS602..2077
Misc Feature(1)548..550
Misc Feature(2)<602..931
Misc Feature(3)1196..2068
Misc Feature(4)<1196..1972
Misc Feature(5)order(1214..1216,1268..1270,1280..1282,1298..1303,1343..1348,1400..1402,1412..1414,1430..1435,1469..1474,1523..1525,1538..1540,1556..1561,1622..1624,1655..1657,1673..1678,1712..1714,1766..1768,1778..1780,1796..1801,1835..1840,1901..1903,1916..1918,1934..1939,1976..1981,2033..2035,2045..2047,2063..2068)
Misc Feature(6)1232..1345
Misc Feature(7)1361..1471
Misc Feature(8)1484..1597
Misc Feature(9)1619..1711
Misc Feature(10)1724..1834
Misc Feature(11)1862..1972
Misc Feature(12)1991..2065
Exon (1)1..372
Exon (2)373..466
Exon (3)467..572
Exon (4)573..642
Exon (5)643..894
Exon (6)895..960
Exon (7)961..1047
Exon (8)1048..1104
Exon (9)1105..1207
Exon (10)1208..1313
Exon (11)1314..1384
Exon (12)1385..1456
Exon (13)1457..1577
Exon (14)1578..1683
Exon (15)1684..1833
Exon (16)1834..1881
Exon (17)1882..1983
Exon (18)1984..3401
Translation

Target ORF information:

RefSeq Version NM_001190267.1
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001190267.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCAGCGGA AGGACAGGGA GATGCAGATG AATGAAGCAA AAATTGCAGA ATGTTTGCAG 
ACTATCTCTG ACCTGGAGAC GGAGTGCCTA GACCTGCGCA CTAAGCTTTG TGACCTTGAA 
AGAGCCAACC AGACCCTGAA GGATGAATAT GATGCCCTGC AGATCACTTT TACTGCCTTG 
GAGGGAAAAC TGAGGAAAAC TACGGAAGAG AACCAGGAGC TGGTCACCAG ATGGATGGCT 
GAGAAAGCCC AGGAAGCCAA TCGGCTTAAT GCAGAGAATG AAAAAGACTC CAGGAGGCGG 
CAAGCCCGGC TGCAGAAAGA GCTTGCAGAA GCAGCAAAGG AACCTCTACC AGTCGAACAG 
GATGATGACA TTGAGGTCAT TGTGGATGAA ACTTCTGATC ACACAGAAGA GACCTCTCCT 
GTGCGAGCCA TCAGCAGAGC AGCCACTAAG CGACTCTCGC AGCCTGCTGG AGGCCTTCTG 
GATTCTATCA CTAATATCTT TGGGAGACGC TCTGTCTCTT CCTTCCCAGT CCCCCAGGAC 
AATGTGGATA CTCATCCTGG TTCTGGTAAA GAAGTGAGGG TACCAGCTAC TGCCTTGTGT 
GTCTTCGATG CACATGATGG GGAAGTCAAC GCTGTGCAGT TCAGTCCAGG TTCCCGGTTA 
CTGGCCACTG GAGGCATGGA CCGCAGGGTT AAGCTTTGGG AAGTATTTGG AGAAAAATGT 
GAGTTCAAGG GTTCCCTATC TGGCAGTAAT GCAGGAATTA CAAGCATTGA ATTTGATAGT 
GCTGGATCTT ACCTCTTAGC AGCTTCAAAT GATTTTGCAA GCCGAATCTG GACTGTGGAT 
GATTATCGAT TACGGCACAC ACTCACGGGA CACAGTGGGA AAGTGCTGTC TGCTAAGTTC 
CTGCTGGACA ATGCGCGGAT TGTCTCAGGA AGTCACGACC GGACTCTCAA ACTCTGGGAT 
CTACGCAGCA AAGTCTGCAT AAAGACAGTG TTTGCAGGAT CCAGTTGCAA TGATATTGTC 
TGCACAGAGC AATGTGTAAT GAGTGGACAT TTTGACAAGA AAATTCGTTT CTGGGACATT 
CGATCAGAGA GCATAGTTCG AGAGATGGAG CTGTTGGGAA AGATTACTGC CCTGGACTTA 
AACCCAGAAA GGACTGAGCT CCTGAGCTGC TCCCGTGATG ACTTGCTAAA AGTTATTGAT 
CTCCGAACAA ATGCTATCAA GCAGACATTC AGTGCACCTG GGTTCAAGTG CGGCTCTGAC 
TGGACCAGAG TTGTCTTCAG CCCTGATGGC AGTTACGTGG CGGCAGGCTC TGCTGAGGGC 
TCTCTGTATA TCTGGAGTGT GCTCACAGGG AAAGTGGAAA AGGTTCTTTC AAAGCAGCAC 
AGCTCATCCA TCAATGCGGT GGCGTGGTCG CCCTCTGGCT CGCACGTTGT CAGTGTGGAC 
AAAGGATGCA AAGCTGTGCT GTGGGCACAG TACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu14614
Clone ID Related Accession (Same CDS sequence) NM_001190266.1
Accession Version NM_001190266.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1572bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags COA
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2017-12-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform 4
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB084962.1, AC013726.7, BC000061.2, BC071846.1 and AA809053.1. Transcript Variant: This variant (4) uses an alternate splice junction at the 3' end of a coding exon compared to variant 1, that causes a frameshift. The resulting isoform (4) is shorter at the N-terminus compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC000061.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCCCAAC TGAGGATTAA GCACCAAGAG GAACTGACTG AATTACACAA GAAACGTGGG 
GAGTTAGCTC AACTGGTGAT TGACCTGAAT AACCAAATGC AGCGGAAGGA CAGGGAGATG 
CAGATGAATG AAGCAAAAAT TGCAGAATGT TTGCAGACTA TCTCTGACCT GGAGACGGAG 
TGCCTAGACC TGCGCACTAA GCTTTGTGAC CTTGAAAGAG CCAACCAGAC CCTGAAGGAT 
GAATATGATG CCCTGCAGAT CACTTTTACT GCCTTGGAGG GAAAACTGAG GAAAACTACG 
GAAGAGAACC AGGAGCTGGT CACCAGATGG ATGGCTGAGA AAGCCCAGGA AGCCAATCGG 
CTTAATGCAG AGAATGAAAA AGACTCCAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGG 
AGACGCTCTG TCTCTTCCTT CCCAGTCCCC CAGGACAATG TGGATACTCA TCCTGGTTCT 
GGTAAAGAAG TGAGGGTACC AGCTACTGCC TTGTGTGTCT TCGATGCACA TGATGGGGAA 
GTCAACGCTG TGCAGTTCAG TCCAGGTTCC CGGTTACTGG CCACTGGAGG CATGGACCGC 
AGGGTTAAGC TTTGGGAAGT ATTTGGAGAA AAATGTGAGT TCAAGGGTTC CCTATCTGGC 
AGTAATGCAG GAATTACAAG CATTGAATTT GATAGTGCTG GATCTTACCT CTTAGCAGCT 
TCAAATGATT TTGCAAGCCG AATCTGGACT GTGGATGATT ATCGATTACG GCACACACTC 
ACGGGACACA GTGGGAAAGT GCTGTCTGCT AAGTTCCTGC TGGACAATGC GCGGATTGTC 
TCAGGAAGTC ACGACCGGAC TCTCAAACTC TGGGATCTAC GCAGCAAAGT CTGCATAAAG 
ACAGTGTTTG CAGGATCCAG TTGCAATGAT ATTGTCTGCA CAGAGCAATG TGTAATGAGT 
GGACATTTTG ACAAGAAAAT TCGTTTCTGG GACATTCGAT CAGAGAGCAT AGTTCGAGAG 
ATGGAGCTGT TGGGAAAGAT TACTGCCCTG GACTTAAACC CAGAAAGGAC TGAGCTCCTG 
AGCTGCTCCC GTGATGACTT GCTAAAAGTT ATTGATCTCC GAACAAATGC TATCAAGCAG 
ACATTCAGTG CACCTGGGTT CAAGTGCGGC TCTGACTGGA CCAGAGTTGT CTTCAGCCCT 
GATGGCAGTT ACGTGGCGGC AGGCTCTGCT GAGGGCTCTC TGTATATCTG GAGTGTGCTC 
ACAGGGAAAG TGGAAAAGGT TCTTTCAAAG CAGCACAGCT CATCCATCAA TGCGGTGGCG 
TGGTCGCCCT CTGGCTCGCA CGTTGTCAGT GTGGACAAAG GATGCAAAGC TGTGCTGTGG 
GCACAGTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001177195.1
CDS508..2079
Misc Feature(1)319..321
Misc Feature(2)<511..873
Misc Feature(3)1198..2070
Misc Feature(4)order(1216..1218,1270..1272,1282..1284,1300..1305,1345..1350,1402..1404,1414..1416,1432..1437,1471..1476,1525..1527,1540..1542,1558..1563,1624..1626,1657..1659,1675..1680,1714..1716,1768..1770,1780..1782,1798..1803,1837..1842,1903..1905,1918..1920,1936..1941,1978..1983,2035..2037,2047..2049,2065..2070)
Misc Feature(5)1234..1347
Misc Feature(6)1363..1473
Misc Feature(7)1486..1599
Misc Feature(8)1621..1713
Misc Feature(9)1726..1836
Misc Feature(10)1864..1974
Misc Feature(11)1993..2067
Exon (1)1..370
Exon (2)371..464
Exon (3)465..570
Exon (4)571..644
Exon (5)645..896
Exon (6)897..962
Exon (7)963..1049
Exon (8)1050..1106
Exon (9)1107..1209
Exon (10)1210..1315
Exon (11)1316..1386
Exon (12)1387..1458
Exon (13)1459..1579
Exon (14)1580..1685
Exon (15)1686..1835
Exon (16)1836..1883
Exon (17)1884..1985
Exon (18)1986..3403
Translation

Target ORF information:

RefSeq Version NM_001190266.1
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001190266.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCCCAAC TGAGGATTAA GCACCAAGAG GAACTGACTG AATTACACAA GAAACGTGGG 
GAGTTAGCTC AACTGGTGAT TGACCTGAAT AACCAAATGC AGCGGAAGGA CAGGGAGATG 
CAGATGAATG AAGCAAAAAT TGCAGAATGT TTGCAGACTA TCTCTGACCT GGAGACGGAG 
TGCCTAGACC TGCGCACTAA GCTTTGTGAC CTTGAAAGAG CCAACCAGAC CCTGAAGGAT 
GAATATGATG CCCTGCAGAT CACTTTTACT GCCTTGGAGG GAAAACTGAG GAAAACTACG 
GAAGAGAACC AGGAGCTGGT CACCAGATGG ATGGCTGAGA AAGCCCAGGA AGCCAATCGG 
CTTAATGCAG AGAATGAAAA AGACTCCAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGG 
AGACGCTCTG TCTCTTCCTT CCCAGTCCCC CAGGACAATG TGGATACTCA TCCTGGTTCT 
GGTAAAGAAG TGAGGGTACC AGCTACTGCC TTGTGTGTCT TCGATGCACA TGATGGGGAA 
GTCAACGCTG TGCAGTTCAG TCCAGGTTCC CGGTTACTGG CCACTGGAGG CATGGACCGC 
AGGGTTAAGC TTTGGGAAGT ATTTGGAGAA AAATGTGAGT TCAAGGGTTC CCTATCTGGC 
AGTAATGCAG GAATTACAAG CATTGAATTT GATAGTGCTG GATCTTACCT CTTAGCAGCT 
TCAAATGATT TTGCAAGCCG AATCTGGACT GTGGATGATT ATCGATTACG GCACACACTC 
ACGGGACACA GTGGGAAAGT GCTGTCTGCT AAGTTCCTGC TGGACAATGC GCGGATTGTC 
TCAGGAAGTC ACGACCGGAC TCTCAAACTC TGGGATCTAC GCAGCAAAGT CTGCATAAAG 
ACAGTGTTTG CAGGATCCAG TTGCAATGAT ATTGTCTGCA CAGAGCAATG TGTAATGAGT 
GGACATTTTG ACAAGAAAAT TCGTTTCTGG GACATTCGAT CAGAGAGCAT AGTTCGAGAG 
ATGGAGCTGT TGGGAAAGAT TACTGCCCTG GACTTAAACC CAGAAAGGAC TGAGCTCCTG 
AGCTGCTCCC GTGATGACTT GCTAAAAGTT ATTGATCTCC GAACAAATGC TATCAAGCAG 
ACATTCAGTG CACCTGGGTT CAAGTGCGGC TCTGACTGGA CCAGAGTTGT CTTCAGCCCT 
GATGGCAGTT ACGTGGCGGC AGGCTCTGCT GAGGGCTCTC TGTATATCTG GAGTGTGCTC 
ACAGGGAAAG TGGAAAAGGT TCTTTCAAAG CAGCACAGCT CATCCATCAA TGCGGTGGCG 
TGGTCGCCCT CTGGCTCGCA CGTTGTCAGT GTGGACAAAG GATGCAAAGC TGTGCTGTGG 
GCACAGTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu26895
Clone ID Related Accession (Same CDS sequence) NM_030803.6
Accession Version NM_030803.6 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1824bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags COA
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2017-12-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform 1
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB084962.1, AC013726.7, AY398617.1, BC117337.1 and AA809053.1. This sequence is a reference standard in the RefSeqGene project. On Jan 29, 2007 this sequence version replaced NM_030803.5. Transcript Variant: This variant (1) encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.67529.1, SRR1803615.237511.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACTAAGCG ACTCTCGCAG CCTGCTGGAG GCCTTCTGGA TTCTATCACT 
AATATCTTTG GGAGACGCTC TGTCTCTTCC TTCCCAGTCC CCCAGGACAA TGTGGATACT 
CATCCTGGTT CTGGTAAAGA AGTGAGGGTA CCAGCTACTG CCTTGTGTGT CTTCGATGCA 
CATGATGGGG AAGTCAACGC TGTGCAGTTC AGTCCAGGTT CCCGGTTACT GGCCACTGGA 
GGCATGGACC GCAGGGTTAA GCTTTGGGAA GTATTTGGAG AAAAATGTGA GTTCAAGGGT 
TCCCTATCTG GCAGTAATGC AGGAATTACA AGCATTGAAT TTGATAGTGC TGGATCTTAC 
CTCTTAGCAG CTTCAAATGA TTTTGCAAGC CGAATCTGGA CTGTGGATGA TTATCGATTA 
CGGCACACAC TCACGGGACA CAGTGGGAAA GTGCTGTCTG CTAAGTTCCT GCTGGACAAT 
GCGCGGATTG TCTCAGGAAG TCACGACCGG ACTCTCAAAC TCTGGGATCT ACGCAGCAAA 
GTCTGCATAA AGACAGTGTT TGCAGGATCC AGTTGCAATG ATATTGTCTG CACAGAGCAA 
TGTGTAATGA GTGGACATTT TGACAAGAAA ATTCGTTTCT GGGACATTCG ATCAGAGAGC 
ATAGTTCGAG AGATGGAGCT GTTGGGAAAG ATTACTGCCC TGGACTTAAA CCCAGAAAGG 
ACTGAGCTCC TGAGCTGCTC CCGTGATGAC TTGCTAAAAG TTATTGATCT CCGAACAAAT 
GCTATCAAGC AGACATTCAG TGCACCTGGG TTCAAGTGCG GCTCTGACTG GACCAGAGTT 
GTCTTCAGCC CTGATGGCAG TTACGTGGCG GCAGGCTCTG CTGAGGGCTC TCTGTATATC 
TGGAGTGTGC TCACAGGGAA AGTGGAAAAG GTTCTTTCAA AGCAGCACAG CTCATCCATC 
AATGCGGTGG CGTGGTCGCC CTCTGGCTCG CACGTTGTCA GTGTGGACAA AGGATGCAAA 
GCTGTGCTGT GGGCACAGTA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_110430.5
CDS258..2081
Misc Feature(1)234..236
Misc Feature(2)294..386
Misc Feature(3)348..875
Misc Feature(4)<606..923
Misc Feature(5)672..674
Misc Feature(6)876..947
Misc Feature(7)945..983
Misc Feature(8)1062..1064
Misc Feature(9)1116..1118
Misc Feature(10)1143..1154
Misc Feature(11)1200..2072
Misc Feature(12)<1200..1976
Misc Feature(13)1215..1334
Misc Feature(14)order(1218..1220,1272..1274,1284..1286,1302..1307,1347..1352,1404..1406,1416..1418,1434..1439,1473..1478,1527..1529,1542..1544,1560..1565,1626..1628,1659..1661,1677..1682,1716..1718,1770..1772,1782..1784,1800..1805,1839..1844,1905..1907,1920..1922,1938..1943,1980..1985,2037..2039,2049..2051,2067..2072)
Misc Feature(15)1236..1349
Misc Feature(16)1347..1466
Misc Feature(17)1365..1475
Misc Feature(18)1473..1592
Misc Feature(19)1488..1601
Misc Feature(20)1596..1709
Misc Feature(21)1623..1715
Misc Feature(22)1713..1832
Misc Feature(23)1728..1838
Misc Feature(24)1851..1976
Misc Feature(25)1866..1976
Misc Feature(26)1980..2078
Misc Feature(27)1995..2069
Exon (1)1..372
Exon (2)373..466
Exon (3)467..572
Exon (4)573..646
Exon (5)647..898
Exon (6)899..964
Exon (7)965..1051
Exon (8)1052..1108
Exon (9)1109..1211
Exon (10)1212..1317
Exon (11)1318..1388
Exon (12)1389..1460
Exon (13)1461..1581
Exon (14)1582..1687
Exon (15)1688..1837
Exon (16)1838..1885
Exon (17)1886..1987
Exon (18)1988..3405
Translation

Target ORF information:

RefSeq Version NM_030803.6
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_030803.6

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACTAAGCG ACTCTCGCAG CCTGCTGGAG GCCTTCTGGA TTCTATCACT 
AATATCTTTG GGAGACGCTC TGTCTCTTCC TTCCCAGTCC CCCAGGACAA TGTGGATACT 
CATCCTGGTT CTGGTAAAGA AGTGAGGGTA CCAGCTACTG CCTTGTGTGT CTTCGATGCA 
CATGATGGGG AAGTCAACGC TGTGCAGTTC AGTCCAGGTT CCCGGTTACT GGCCACTGGA 
GGCATGGACC GCAGGGTTAA GCTTTGGGAA GTATTTGGAG AAAAATGTGA GTTCAAGGGT 
TCCCTATCTG GCAGTAATGC AGGAATTACA AGCATTGAAT TTGATAGTGC TGGATCTTAC 
CTCTTAGCAG CTTCAAATGA TTTTGCAAGC CGAATCTGGA CTGTGGATGA TTATCGATTA 
CGGCACACAC TCACGGGACA CAGTGGGAAA GTGCTGTCTG CTAAGTTCCT GCTGGACAAT 
GCGCGGATTG TCTCAGGAAG TCACGACCGG ACTCTCAAAC TCTGGGATCT ACGCAGCAAA 
GTCTGCATAA AGACAGTGTT TGCAGGATCC AGTTGCAATG ATATTGTCTG CACAGAGCAA 
TGTGTAATGA GTGGACATTT TGACAAGAAA ATTCGTTTCT GGGACATTCG ATCAGAGAGC 
ATAGTTCGAG AGATGGAGCT GTTGGGAAAG ATTACTGCCC TGGACTTAAA CCCAGAAAGG 
ACTGAGCTCC TGAGCTGCTC CCGTGATGAC TTGCTAAAAG TTATTGATCT CCGAACAAAT 
GCTATCAAGC AGACATTCAG TGCACCTGGG TTCAAGTGCG GCTCTGACTG GACCAGAGTT 
GTCTTCAGCC CTGATGGCAG TTACGTGGCG GCAGGCTCTG CTGAGGGCTC TCTGTATATC 
TGGAGTGTGC TCACAGGGAA AGTGGAAAAG GTTCTTTCAA AGCAGCACAG CTCATCCATC 
AATGCGGTGG CGTGGTCGCC CTCTGGCTCG CACGTTGTCA GTGTGGACAA AGGATGCAAA 
GCTGTGCTGT GGGCACAGTA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu15253
Clone ID Related Accession (Same CDS sequence) NM_198890.2
Accession Version NM_198890.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1335bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2017-12-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform 3
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB084962.1, AC013726.7, EF079890.1, BC071846.1 and AA809053.1. On Jun 12, 2010 this sequence version replaced NM_198890.1. Transcript Variant: This variant (3) lacks an alternate in-frame segment and an alternate in-frame exon compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803613.17512.1, SRR1660803.65787.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968968 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACGAGACGCT CTGTCTCTTC CTTCCCAGTC CCCCAGGACA ATGTGGATAC TCATCCTGGT 
TCTGGTAAAG AAGTGAGGGT ACCAGCTACT GCCTTGTGTG TCTTCGATGC ACATGATGGG 
GAAGTCAACG CTGTGCAGTT CAGTCCAGGT TCCCGGTTAC TGGCCACTGG AGGCATGGAC 
CGCAGGGTTA AGCTTTGGGA AGTATTTGGA GAAAAATGTG AGTTCAAGGG TTCCCTATCT 
GGCAGTAATG CAGGAATTAC AAGCATTGAA TTTGATAGTG CTGGATCTTA CCTCTTAGCA 
GCTTCAAATG ATTTTGCAAG CCGAATCTGG ACTGTGGATG ATTATCGATT ACGGCACACA 
CTCACGGGAC ACAGTGGGAA AGTGCTGTCT GCTAAGTTCC TGCTGGACAA TGCGCGGATT 
GTCTCAGGAA GTCACGACCG GACTCTCAAA CTCTGGGATC TACGCAGCAA AGTCTGCATA 
AAGACAGTGT TTGCAGGATC CAGTTGCAAT GATATTGTCT GCACAGAGCA ATGTGTAATG 
AGTGGACATT TTGACAAGAA AATTCGTTTC TGGGACATTC GATCAGAGAG CATAGTTCGA 
GAGATGGAGC TGTTGGGAAA GATTACTGCC CTGGACTTAA ACCCAGAAAG GACTGAGCTC 
CTGAGCTGCT CCCGTGATGA CTTGCTAAAA GTTATTGATC TCCGAACAAA TGCTATCAAG 
CAGACATTCA GTGCACCTGG GTTCAAGTGC GGCTCTGACT GGACCAGAGT TGTCTTCAGC 
CCTGATGGCA GTTACGTGGC GGCAGGCTCT GCTGAGGGCT CTCTGTATAT CTGGAGTGTG 
CTCACAGGGA AAGTGGAAAA GGTTCTTTCA AAGCAGCACA GCTCATCCAT CAATGCGGTG 
GCGTGGTCGC CCTCTGGCTC GCACGTTGTC AGTGTGGACA AAGGATGCAA AGCTGTGCTG 
TGGGCACAGT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_942593.2
CDS258..1592
Misc Feature(1)234..236
Misc Feature(2)294..386
Misc Feature(3)711..1583
Misc Feature(4)<711..1487
Misc Feature(5)order(729..731,783..785,795..797,813..818,858..863,915..917,927..929,945..950,984..989,1038..1040,1053..1055,1071..1076,1137..1139,1170..1172,1188..1193,1227..1229,1281..1283,1293..1295,1311..1316,1350..1355,1416..1418,1431..1433,1449..1454,1491..1496,1548..1550,1560..1562,1578..1583)
Misc Feature(6)747..860
Misc Feature(7)876..986
Misc Feature(8)999..1112
Misc Feature(9)1134..1226
Misc Feature(10)1239..1349
Misc Feature(11)1377..1487
Misc Feature(12)1506..1580
Exon (1)1..372
Exon (2)373..466
Exon (3)467..532
Exon (4)533..619
Exon (5)620..722
Exon (6)723..828
Exon (7)829..899
Exon (8)900..971
Exon (9)972..1092
Exon (10)1093..1198
Exon (11)1199..1348
Exon (12)1349..1396
Exon (13)1397..1498
Exon (14)1499..2916
Translation

Target ORF information:

RefSeq Version NM_198890.2
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_198890.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACGAGACGCT CTGTCTCTTC CTTCCCAGTC CCCCAGGACA ATGTGGATAC TCATCCTGGT 
TCTGGTAAAG AAGTGAGGGT ACCAGCTACT GCCTTGTGTG TCTTCGATGC ACATGATGGG 
GAAGTCAACG CTGTGCAGTT CAGTCCAGGT TCCCGGTTAC TGGCCACTGG AGGCATGGAC 
CGCAGGGTTA AGCTTTGGGA AGTATTTGGA GAAAAATGTG AGTTCAAGGG TTCCCTATCT 
GGCAGTAATG CAGGAATTAC AAGCATTGAA TTTGATAGTG CTGGATCTTA CCTCTTAGCA 
GCTTCAAATG ATTTTGCAAG CCGAATCTGG ACTGTGGATG ATTATCGATT ACGGCACACA 
CTCACGGGAC ACAGTGGGAA AGTGCTGTCT GCTAAGTTCC TGCTGGACAA TGCGCGGATT 
GTCTCAGGAA GTCACGACCG GACTCTCAAA CTCTGGGATC TACGCAGCAA AGTCTGCATA 
AAGACAGTGT TTGCAGGATC CAGTTGCAAT GATATTGTCT GCACAGAGCA ATGTGTAATG 
AGTGGACATT TTGACAAGAA AATTCGTTTC TGGGACATTC GATCAGAGAG CATAGTTCGA 
GAGATGGAGC TGTTGGGAAA GATTACTGCC CTGGACTTAA ACCCAGAAAG GACTGAGCTC 
CTGAGCTGCT CCCGTGATGA CTTGCTAAAA GTTATTGATC TCCGAACAAA TGCTATCAAG 
CAGACATTCA GTGCACCTGG GTTCAAGTGC GGCTCTGACT GGACCAGAGT TGTCTTCAGC 
CCTGATGGCA GTTACGTGGC GGCAGGCTCT GCTGAGGGCT CTCTGTATAT CTGGAGTGTG 
CTCACAGGGA AAGTGGAAAA GGTTCTTTCA AAGCAGCACA GCTCATCCAT CAATGCGGTG 
GCGTGGTCGC CCTCTGGCTC GCACGTTGTC AGTGTGGACA AAGGATGCAA AGCTGTGCTG 
TGGGCACAGT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu27102
Clone ID Related Accession (Same CDS sequence) NM_017974.3
Accession Version NM_017974.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1767bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2017-12-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform 2
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB084962.1, DB474638.1, AK001690.1, BC117337.1, AC013726.7 and AA809053.1. On Jan 29, 2007 this sequence version replaced NM_017974.2. Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803616.158169.1, SRR1803611.206964.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACGAGACG CTCTGTCTCT TCCTTCCCAG TCCCCCAGGA CAATGTGGAT 
ACTCATCCTG GTTCTGGTAA AGAAGTGAGG GTACCAGCTA CTGCCTTGTG TGTCTTCGAT 
GCACATGATG GGGAAGTCAA CGCTGTGCAG TTCAGTCCAG GTTCCCGGTT ACTGGCCACT 
GGAGGCATGG ACCGCAGGGT TAAGCTTTGG GAAGTATTTG GAGAAAAATG TGAGTTCAAG 
GGTTCCCTAT CTGGCAGTAA TGCAGGAATT ACAAGCATTG AATTTGATAG TGCTGGATCT 
TACCTCTTAG CAGCTTCAAA TGATTTTGCA AGCCGAATCT GGACTGTGGA TGATTATCGA 
TTACGGCACA CACTCACGGG ACACAGTGGG AAAGTGCTGT CTGCTAAGTT CCTGCTGGAC 
AATGCGCGGA TTGTCTCAGG AAGTCACGAC CGGACTCTCA AACTCTGGGA TCTACGCAGC 
AAAGTCTGCA TAAAGACAGT GTTTGCAGGA TCCAGTTGCA ATGATATTGT CTGCACAGAG 
CAATGTGTAA TGAGTGGACA TTTTGACAAG AAAATTCGTT TCTGGGACAT TCGATCAGAG 
AGCATAGTTC GAGAGATGGA GCTGTTGGGA AAGATTACTG CCCTGGACTT AAACCCAGAA 
AGGACTGAGC TCCTGAGCTG CTCCCGTGAT GACTTGCTAA AAGTTATTGA TCTCCGAACA 
AATGCTATCA AGCAGACATT CAGTGCACCT GGGTTCAAGT GCGGCTCTGA CTGGACCAGA 
GTTGTCTTCA GCCCTGATGG CAGTTACGTG GCGGCAGGCT CTGCTGAGGG CTCTCTGTAT 
ATCTGGAGTG TGCTCACAGG GAAAGTGGAA AAGGTTCTTT CAAAGCAGCA CAGCTCATCC 
ATCAATGCGG TGGCGTGGTC GCCCTCTGGC TCGCACGTTG TCAGTGTGGA CAAAGGATGC 
AAAGCTGTGC TGTGGGCACA GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_060444.3
CDS258..2024
Misc Feature(1)234..236
Misc Feature(2)348..875
Misc Feature(3)<606..923
Misc Feature(4)1143..2015
Misc Feature(5)<1143..1919
Misc Feature(6)order(1161..1163,1215..1217,1227..1229,1245..1250,1290..1295,1347..1349,1359..1361,1377..1382,1416..1421,1470..1472,1485..1487,1503..1508,1569..1571,1602..1604,1620..1625,1659..1661,1713..1715,1725..1727,1743..1748,1782..1787,1848..1850,1863..1865,1881..1886,1923..1928,1980..1982,1992..1994,2010..2015)
Misc Feature(7)1179..1292
Misc Feature(8)1308..1418
Misc Feature(9)1431..1544
Misc Feature(10)1566..1658
Misc Feature(11)1671..1781
Misc Feature(12)1809..1919
Misc Feature(13)1938..2012
Exon (1)1..372
Exon (2)373..466
Exon (3)467..572
Exon (4)573..646
Exon (5)647..898
Exon (6)899..964
Exon (7)965..1051
Exon (8)1052..1154
Exon (9)1155..1260
Exon (10)1261..1331
Exon (11)1332..1403
Exon (12)1404..1524
Exon (13)1525..1630
Exon (14)1631..1780
Exon (15)1781..1828
Exon (16)1829..1930
Exon (17)1931..3348
Translation

Target ORF information:

RefSeq Version NM_017974.3
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_017974.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACGAGACG CTCTGTCTCT TCCTTCCCAG TCCCCCAGGA CAATGTGGAT 
ACTCATCCTG GTTCTGGTAA AGAAGTGAGG GTACCAGCTA CTGCCTTGTG TGTCTTCGAT 
GCACATGATG GGGAAGTCAA CGCTGTGCAG TTCAGTCCAG GTTCCCGGTT ACTGGCCACT 
GGAGGCATGG ACCGCAGGGT TAAGCTTTGG GAAGTATTTG GAGAAAAATG TGAGTTCAAG 
GGTTCCCTAT CTGGCAGTAA TGCAGGAATT ACAAGCATTG AATTTGATAG TGCTGGATCT 
TACCTCTTAG CAGCTTCAAA TGATTTTGCA AGCCGAATCT GGACTGTGGA TGATTATCGA 
TTACGGCACA CACTCACGGG ACACAGTGGG AAAGTGCTGT CTGCTAAGTT CCTGCTGGAC 
AATGCGCGGA TTGTCTCAGG AAGTCACGAC CGGACTCTCA AACTCTGGGA TCTACGCAGC 
AAAGTCTGCA TAAAGACAGT GTTTGCAGGA TCCAGTTGCA ATGATATTGT CTGCACAGAG 
CAATGTGTAA TGAGTGGACA TTTTGACAAG AAAATTCGTT TCTGGGACAT TCGATCAGAG 
AGCATAGTTC GAGAGATGGA GCTGTTGGGA AAGATTACTG CCCTGGACTT AAACCCAGAA 
AGGACTGAGC TCCTGAGCTG CTCCCGTGAT GACTTGCTAA AAGTTATTGA TCTCCGAACA 
AATGCTATCA AGCAGACATT CAGTGCACCT GGGTTCAAGT GCGGCTCTGA CTGGACCAGA 
GTTGTCTTCA GCCCTGATGG CAGTTACGTG GCGGCAGGCT CTGCTGAGGG CTCTCTGTAT 
ATCTGGAGTG TGCTCACAGG GAAAGTGGAA AAGGTTCTTT CAAAGCAGCA CAGCTCATCC 
ATCAATGCGG TGGCGTGGTC GCCCTCTGGC TCGCACGTTG TCAGTGTGGA CAAAGGATGC 
AAAGCTGTGC TGTGGGCACA GTACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu36383
Clone ID Related Accession (Same CDS sequence) XM_005246082.2
Accession Version XM_005246082.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1875bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005246082.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACTAAGCG ACTCTCGCAG CCTGCTGGAG GCCTTCTGGA TTCTATCACT 
AATATCTTTG GTCTGTCCGA GTCTCCCCTT TTGGGACATC ATTCTTCTTC TGATGCTGCC 
AGGAGACGCT CTGTCTCTTC CTTCCCAGTC CCCCAGGACA ATGTGGATAC TCATCCTGGT 
TCTGGTAAAG AAGTGAGGGT ACCAGCTACT GCCTTGTGTG TCTTCGATGC ACATGATGGG 
GAAGTCAACG CTGTGCAGTT CAGTCCAGGT TCCCGGTTAC TGGCCACTGG AGGCATGGAC 
CGCAGGGTTA AGCTTTGGGA AGTATTTGGA GAAAAATGTG AGTTCAAGGG TTCCCTATCT 
GGCAGTAATG CAGGAATTAC AAGCATTGAA TTTGATAGTG CTGGATCTTA CCTCTTAGCA 
GCTTCAAATG ATTTTGCAAG CCGAATCTGG ACTGTGGATG ATTATCGATT ACGGCACACA 
CTCACGGGAC ACAGTGGGAA AGTGCTGTCT GCTAAGTTCC TGCTGGACAA TGCGCGGATT 
GTCTCAGGAA GTCACGACCG GACTCTCAAA CTCTGGGATC TACGCAGCAA AGTCTGCATA 
AAGACAGTGT TTGCAGGATC CAGTTGCAAT GATATTGTCT GCACAGAGCA ATGTGTAATG 
AGTGGACATT TTGACAAGAA AATTCGTTTC TGGGACATTC GATCAGAGAG CATAGTTCGA 
GAGATGGAGC TGTTGGGAAA GATTACTGCC CTGGACTTAA ACCCAGAAAG GACTGAGCTC 
CTGAGCTGCT CCCGTGATGA CTTGCTAAAA GTTATTGATC TCCGAACAAA TGCTATCAAG 
CAGACATTCA GTGCACCTGG GTTCAAGTGC GGCTCTGACT GGACCAGAGT TGTCTTCAGC 
CCTGATGGCA GTTACGTGGC GGCAGGCTCT GCTGAGGGCT CTCTGTATAT CTGGAGTGTG 
CTCACAGGGA AAGTGGAAAA GGTTCTTTCA AAGCAGCACA GCTCATCCAT CAATGCGGTG 
GCGTGGTCGC CCTCTGGCTC GCACGTTGTC AGTGTGGACA AAGGATGCAA AGCTGTGCTG 
TGGGCACAGT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005246139.1
CDS195..2069
Misc Feature(1)285..812
Misc Feature(2)<543..860
Misc Feature(3)<1008..1364
Misc Feature(4)1188..2060
Misc Feature(5)<1188..1964
Misc Feature(6)order(1206..1208,1260..1262,1272..1274,1290..1295,1335..1340,1392..1394,1404..1406,1422..1427,1461..1466,1515..1517,1530..1532,1548..1553,1614..1616,1647..1649,1665..1670,1704..1706,1758..1760,1770..1772,1788..1793,1827..1832,1893..1895,1908..1910,1926..1931,1968..1973,2025..2027,2037..2039,2055..2060)
Misc Feature(7)1224..1337
Misc Feature(8)1353..1463
Misc Feature(9)1476..1589
Misc Feature(10)1611..1703
Misc Feature(11)1716..1826
Misc Feature(12)1854..1964
Misc Feature(13)1983..2057
Translation

Target ORF information:

RefSeq Version XM_005246082.2
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005246082.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAA ATTGCAGAAT GTTTGCAGAC TATCTCTGAC 
CTGGAGACGG AGTGCCTAGA CCTGCGCACT AAGCTTTGTG ACCTTGAAAG AGCCAACCAG 
ACCCTGAAGG ATGAATATGA TGCCCTGCAG ATCACTTTTA CTGCCTTGGA GGGAAAACTG 
AGGAAAACTA CGGAAGAGAA CCAGGAGCTG GTCACCAGAT GGATGGCTGA GAAAGCCCAG 
GAAGCCAATC GGCTTAATGC AGAGAATGAA AAAGACTCCA GGAGGCGGCA AGCCCGGCTG 
CAGAAAGAGC TTGCAGAAGC AGCAAAGGAA CCTCTACCAG TCGAACAGGA TGATGACATT 
GAGGTCATTG TGGATGAAAC TTCTGATCAC ACAGAAGAGA CCTCTCCTGT GCGAGCCATC 
AGCAGAGCAG CCACTAAGCG ACTCTCGCAG CCTGCTGGAG GCCTTCTGGA TTCTATCACT 
AATATCTTTG GTCTGTCCGA GTCTCCCCTT TTGGGACATC ATTCTTCTTC TGATGCTGCC 
AGGAGACGCT CTGTCTCTTC CTTCCCAGTC CCCCAGGACA ATGTGGATAC TCATCCTGGT 
TCTGGTAAAG AAGTGAGGGT ACCAGCTACT GCCTTGTGTG TCTTCGATGC ACATGATGGG 
GAAGTCAACG CTGTGCAGTT CAGTCCAGGT TCCCGGTTAC TGGCCACTGG AGGCATGGAC 
CGCAGGGTTA AGCTTTGGGA AGTATTTGGA GAAAAATGTG AGTTCAAGGG TTCCCTATCT 
GGCAGTAATG CAGGAATTAC AAGCATTGAA TTTGATAGTG CTGGATCTTA CCTCTTAGCA 
GCTTCAAATG ATTTTGCAAG CCGAATCTGG ACTGTGGATG ATTATCGATT ACGGCACACA 
CTCACGGGAC ACAGTGGGAA AGTGCTGTCT GCTAAGTTCC TGCTGGACAA TGCGCGGATT 
GTCTCAGGAA GTCACGACCG GACTCTCAAA CTCTGGGATC TACGCAGCAA AGTCTGCATA 
AAGACAGTGT TTGCAGGATC CAGTTGCAAT GATATTGTCT GCACAGAGCA ATGTGTAATG 
AGTGGACATT TTGACAAGAA AATTCGTTTC TGGGACATTC GATCAGAGAG CATAGTTCGA 
GAGATGGAGC TGTTGGGAAA GATTACTGCC CTGGACTTAA ACCCAGAAAG GACTGAGCTC 
CTGAGCTGCT CCCGTGATGA CTTGCTAAAA GTTATTGATC TCCGAACAAA TGCTATCAAG 
CAGACATTCA GTGCACCTGG GTTCAAGTGC GGCTCTGACT GGACCAGAGT TGTCTTCAGC 
CCTGATGGCA GTTACGTGGC GGCAGGCTCT GCTGAGGGCT CTCTGTATAT CTGGAGTGTG 
CTCACAGGGA AAGTGGAAAA GGTTCTTTCA AAGCAGCACA GCTCATCCAT CAATGCGGTG 
GCGTGGTCGC CCTCTGGCTC GCACGTTGTC AGTGTGGACA AAGGATGCAA AGCTGTGCTG 
TGGGCACAGT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu36384
Clone ID Related Accession (Same CDS sequence) XM_006712608.2
Accession Version XM_006712608.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1623bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006712608.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGT 
CTGTCCGAGT CTCCCCTTTT GGGACATCAT TCTTCTTCTG ATGCTGCCAG GAGACGCTCT 
GTCTCTTCCT TCCCAGTCCC CCAGGACAAT GTGGATACTC ATCCTGGTTC TGGTAAAGAA 
GTGAGGGTAC CAGCTACTGC CTTGTGTGTC TTCGATGCAC ATGATGGGGA AGTCAACGCT 
GTGCAGTTCA GTCCAGGTTC CCGGTTACTG GCCACTGGAG GCATGGACCG CAGGGTTAAG 
CTTTGGGAAG TATTTGGAGA AAAATGTGAG TTCAAGGGTT CCCTATCTGG CAGTAATGCA 
GGAATTACAA GCATTGAATT TGATAGTGCT GGATCTTACC TCTTAGCAGC TTCAAATGAT 
TTTGCAAGCC GAATCTGGAC TGTGGATGAT TATCGATTAC GGCACACACT CACGGGACAC 
AGTGGGAAAG TGCTGTCTGC TAAGTTCCTG CTGGACAATG CGCGGATTGT CTCAGGAAGT 
CACGACCGGA CTCTCAAACT CTGGGATCTA CGCAGCAAAG TCTGCATAAA GACAGTGTTT 
GCAGGATCCA GTTGCAATGA TATTGTCTGC ACAGAGCAAT GTGTAATGAG TGGACATTTT 
GACAAGAAAA TTCGTTTCTG GGACATTCGA TCAGAGAGCA TAGTTCGAGA GATGGAGCTG 
TTGGGAAAGA TTACTGCCCT GGACTTAAAC CCAGAAAGGA CTGAGCTCCT GAGCTGCTCC 
CGTGATGACT TGCTAAAAGT TATTGATCTC CGAACAAATG CTATCAAGCA GACATTCAGT 
GCACCTGGGT TCAAGTGCGG CTCTGACTGG ACCAGAGTTG TCTTCAGCCC TGATGGCAGT 
TACGTGGCGG CAGGCTCTGC TGAGGGCTCT CTGTATATCT GGAGTGTGCT CACAGGGAAA 
GTGGAAAAGG TTCTTTCAAA GCAGCACAGC TCATCCATCA ATGCGGTGGC GTGGTCGCCC 
TCTGGCTCGC ACGTTGTCAG TGTGGACAAA GGATGCAAAG CTGTGCTGTG GGCACAGTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006712671.1
CDS258..1880
Misc Feature(1)<504..>677
Misc Feature(2)<819..1175
Misc Feature(3)999..1871
Misc Feature(4)<999..1775
Misc Feature(5)order(1017..1019,1071..1073,1083..1085,1101..1106,1146..1151,1203..1205,1215..1217,1233..1238,1272..1277,1326..1328,1341..1343,1359..1364,1425..1427,1458..1460,1476..1481,1515..1517,1569..1571,1581..1583,1599..1604,1638..1643,1704..1706,1719..1721,1737..1742,1779..1784,1836..1838,1848..1850,1866..1871)
Misc Feature(6)1035..1148
Misc Feature(7)1164..1274
Misc Feature(8)1287..1400
Misc Feature(9)1422..1514
Misc Feature(10)1527..1637
Misc Feature(11)1665..1775
Misc Feature(12)1794..1868
Translation

Target ORF information:

RefSeq Version XM_006712608.2
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006712608.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGT CCCGGACATG ATGGCACATG GAATGACAAT 
CAGCTACAAG AAATGGCCCA ACTGAGGATT AAGCACCAAG AGGAACTGAC TGAATTACAC 
AAGAAACGTG GGGAGTTAGC TCAACTGGTG ATTGACCTGA ATAACCAAAT GCAGCGGAAG 
GACAGGGAGA TGCAGATGAA TGAAGCAAAG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGT 
CTGTCCGAGT CTCCCCTTTT GGGACATCAT TCTTCTTCTG ATGCTGCCAG GAGACGCTCT 
GTCTCTTCCT TCCCAGTCCC CCAGGACAAT GTGGATACTC ATCCTGGTTC TGGTAAAGAA 
GTGAGGGTAC CAGCTACTGC CTTGTGTGTC TTCGATGCAC ATGATGGGGA AGTCAACGCT 
GTGCAGTTCA GTCCAGGTTC CCGGTTACTG GCCACTGGAG GCATGGACCG CAGGGTTAAG 
CTTTGGGAAG TATTTGGAGA AAAATGTGAG TTCAAGGGTT CCCTATCTGG CAGTAATGCA 
GGAATTACAA GCATTGAATT TGATAGTGCT GGATCTTACC TCTTAGCAGC TTCAAATGAT 
TTTGCAAGCC GAATCTGGAC TGTGGATGAT TATCGATTAC GGCACACACT CACGGGACAC 
AGTGGGAAAG TGCTGTCTGC TAAGTTCCTG CTGGACAATG CGCGGATTGT CTCAGGAAGT 
CACGACCGGA CTCTCAAACT CTGGGATCTA CGCAGCAAAG TCTGCATAAA GACAGTGTTT 
GCAGGATCCA GTTGCAATGA TATTGTCTGC ACAGAGCAAT GTGTAATGAG TGGACATTTT 
GACAAGAAAA TTCGTTTCTG GGACATTCGA TCAGAGAGCA TAGTTCGAGA GATGGAGCTG 
TTGGGAAAGA TTACTGCCCT GGACTTAAAC CCAGAAAGGA CTGAGCTCCT GAGCTGCTCC 
CGTGATGACT TGCTAAAAGT TATTGATCTC CGAACAAATG CTATCAAGCA GACATTCAGT 
GCACCTGGGT TCAAGTGCGG CTCTGACTGG ACCAGAGTTG TCTTCAGCCC TGATGGCAGT 
TACGTGGCGG CAGGCTCTGC TGAGGGCTCT CTGTATATCT GGAGTGTGCT CACAGGGAAA 
GTGGAAAAGG TTCTTTCAAA GCAGCACAGC TCATCCATCA ATGCGGTGGC GTGGTCGCCC 
TCTGGCTCGC ACGTTGTCAG TGTGGACAAA GGATGCAAAG CTGTGCTGTG GGCACAGTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu36385
Clone ID Related Accession (Same CDS sequence) XM_005246084.2
Accession Version XM_005246084.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform X3
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005246084.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGT 
CTGTCCGAGT CTCCCCTTTT GGGACATCAT TCTTCTTCTG ATGCTGCCAG GAGACGCTCT 
GTCTCTTCCT TCCCAGTCCC CCAGGACAAT GTGGATACTC ATCCTGGTTC TGGTAAAGAA 
GTGAGGGTAC CAGCTACTGC CTTGTGTGTC TTCGATGCAC ATGATGGGGA AGTCAACGCT 
GTGCAGTTCA GTCCAGGTTC CCGGTTACTG GCCACTGGAG GCATGGACCG CAGGGTTAAG 
CTTTGGGAAG TATTTGGAGA AAAATGTGAG TTCAAGGGTT CCCTATCTGG CAGTAATGCA 
GGAATTACAA GCATTGAATT TGATAGTGCT GGATCTTACC TCTTAGCAGC TTCAAATGAT 
TTTGCAAGCC GAATCTGGAC TGTGGATGAT TATCGATTAC GGCACACACT CACGGGACAC 
AGTGGGAAAG TGCTGTCTGC TAAGTTCCTG CTGGACAATG CGCGGATTGT CTCAGGAAGT 
CACGACCGGA CTCTCAAACT CTGGGATCTA CGCAGCAAAG TCTGCATAAA GACAGTGTTT 
GCAGGATCCA GTTGCAATGA TATTGTCTGC ACAGAGCAAT GTGTAATGAG TGGACATTTT 
GACAAGAAAA TTCGTTTCTG GGACATTCGA TCAGAGAGCA TAGTTCGAGA GATGGAGCTG 
TTGGGAAAGA TTACTGCCCT GGACTTAAAC CCAGAAAGGA CTGAGCTCCT GAGCTGCTCC 
CGTGATGACT TGCTAAAAGT TATTGATCTC CGAACAAATG CTATCAAGCA GACATTCAGT 
GCACCTGGGT TCAAGTGCGG CTCTGACTGG ACCAGAGTTG TCTTCAGCCC TGATGGCAGT 
TACGTGGCGG CAGGCTCTGC TGAGGGCTCT CTGTATATCT GGAGTGTGCT CACAGGGAAA 
GTGGAAAAGG TTCTTTCAAA GCAGCACAGC TCATCCATCA ATGCGGTGGC GTGGTCGCCC 
TCTGGCTCGC ACGTTGTCAG TGTGGACAAA GGATGCAAAG CTGTGCTGTG GGCACAGTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005246141.1
CDS166..1608
Misc Feature(1)<547..903
Misc Feature(2)727..1599
Misc Feature(3)<727..1503
Misc Feature(4)order(745..747,799..801,811..813,829..834,874..879,931..933,943..945,961..966,1000..1005,1054..1056,1069..1071,1087..1092,1153..1155,1186..1188,1204..1209,1243..1245,1297..1299,1309..1311,1327..1332,1366..1371,1432..1434,1447..1449,1465..1470,1507..1512,1564..1566,1576..1578,1594..1599)
Misc Feature(5)763..876
Misc Feature(6)892..1002
Misc Feature(7)1015..1128
Misc Feature(8)1150..1242
Misc Feature(9)1255..1365
Misc Feature(10)1393..1503
Misc Feature(11)1522..1596
Translation

Target ORF information:

RefSeq Version XM_005246084.2
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005246084.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGT 
CTGTCCGAGT CTCCCCTTTT GGGACATCAT TCTTCTTCTG ATGCTGCCAG GAGACGCTCT 
GTCTCTTCCT TCCCAGTCCC CCAGGACAAT GTGGATACTC ATCCTGGTTC TGGTAAAGAA 
GTGAGGGTAC CAGCTACTGC CTTGTGTGTC TTCGATGCAC ATGATGGGGA AGTCAACGCT 
GTGCAGTTCA GTCCAGGTTC CCGGTTACTG GCCACTGGAG GCATGGACCG CAGGGTTAAG 
CTTTGGGAAG TATTTGGAGA AAAATGTGAG TTCAAGGGTT CCCTATCTGG CAGTAATGCA 
GGAATTACAA GCATTGAATT TGATAGTGCT GGATCTTACC TCTTAGCAGC TTCAAATGAT 
TTTGCAAGCC GAATCTGGAC TGTGGATGAT TATCGATTAC GGCACACACT CACGGGACAC 
AGTGGGAAAG TGCTGTCTGC TAAGTTCCTG CTGGACAATG CGCGGATTGT CTCAGGAAGT 
CACGACCGGA CTCTCAAACT CTGGGATCTA CGCAGCAAAG TCTGCATAAA GACAGTGTTT 
GCAGGATCCA GTTGCAATGA TATTGTCTGC ACAGAGCAAT GTGTAATGAG TGGACATTTT 
GACAAGAAAA TTCGTTTCTG GGACATTCGA TCAGAGAGCA TAGTTCGAGA GATGGAGCTG 
TTGGGAAAGA TTACTGCCCT GGACTTAAAC CCAGAAAGGA CTGAGCTCCT GAGCTGCTCC 
CGTGATGACT TGCTAAAAGT TATTGATCTC CGAACAAATG CTATCAAGCA GACATTCAGT 
GCACCTGGGT TCAAGTGCGG CTCTGACTGG ACCAGAGTTG TCTTCAGCCC TGATGGCAGT 
TACGTGGCGG CAGGCTCTGC TGAGGGCTCT CTGTATATCT GGAGTGTGCT CACAGGGAAA 
GTGGAAAAGG TTCTTTCAAA GCAGCACAGC TCATCCATCA ATGCGGTGGC GTGGTCGCCC 
TCTGGCTCGC ACGTTGTCAG TGTGGACAAA GGATGCAAAG CTGTGCTGTG GGCACAGTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu36386
Clone ID Related Accession (Same CDS sequence) XM_005246086.2
Accession Version XM_005246086.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1392bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-06
Organism Homo sapiens(human)
Product autophagy-related protein 16-1 isoform X4
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005246086.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGG 
AGACGCTCTG TCTCTTCCTT CCCAGTCCCC CAGGACAATG TGGATACTCA TCCTGGTTCT 
GGTAAAGAAG TGAGGGTACC AGCTACTGCC TTGTGTGTCT TCGATGCACA TGATGGGGAA 
GTCAACGCTG TGCAGTTCAG TCCAGGTTCC CGGTTACTGG CCACTGGAGG CATGGACCGC 
AGGGTTAAGC TTTGGGAAGT ATTTGGAGAA AAATGTGAGT TCAAGGGTTC CCTATCTGGC 
AGTAATGCAG GAATTACAAG CATTGAATTT GATAGTGCTG GATCTTACCT CTTAGCAGCT 
TCAAATGATT TTGCAAGCCG AATCTGGACT GTGGATGATT ATCGATTACG GCACACACTC 
ACGGGACACA GTGGGAAAGT GCTGTCTGCT AAGTTCCTGC TGGACAATGC GCGGATTGTC 
TCAGGAAGTC ACGACCGGAC TCTCAAACTC TGGGATCTAC GCAGCAAAGT CTGCATAAAG 
ACAGTGTTTG CAGGATCCAG TTGCAATGAT ATTGTCTGCA CAGAGCAATG TGTAATGAGT 
GGACATTTTG ACAAGAAAAT TCGTTTCTGG GACATTCGAT CAGAGAGCAT AGTTCGAGAG 
ATGGAGCTGT TGGGAAAGAT TACTGCCCTG GACTTAAACC CAGAAAGGAC TGAGCTCCTG 
AGCTGCTCCC GTGATGACTT GCTAAAAGTT ATTGATCTCC GAACAAATGC TATCAAGCAG 
ACATTCAGTG CACCTGGGTT CAAGTGCGGC TCTGACTGGA CCAGAGTTGT CTTCAGCCCT 
GATGGCAGTT ACGTGGCGGC AGGCTCTGCT GAGGGCTCTC TGTATATCTG GAGTGTGCTC 
ACAGGGAAAG TGGAAAAGGT TCTTTCAAAG CAGCACAGCT CATCCATCAA TGCGGTGGCG 
TGGTCGCCCT CTGGCTCGCA CGTTGTCAGT GTGGACAAAG GATGCAAAGC TGTGCTGTGG 
GCACAGTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005246143.1
CDS166..1557
Misc Feature(1)676..1548
Misc Feature(2)<676..1452
Misc Feature(3)order(694..696,748..750,760..762,778..783,823..828,880..882,892..894,910..915,949..954,1003..1005,1018..1020,1036..1041,1102..1104,1135..1137,1153..1158,1192..1194,1246..1248,1258..1260,1276..1281,1315..1320,1381..1383,1396..1398,1414..1419,1456..1461,1513..1515,1525..1527,1543..1548)
Misc Feature(4)712..825
Misc Feature(5)841..951
Misc Feature(6)964..1077
Misc Feature(7)1099..1191
Misc Feature(8)1204..1314
Misc Feature(9)1342..1452
Misc Feature(10)1471..1545
Translation

Target ORF information:

RefSeq Version XM_005246086.2
Organism Homo sapiens(human)
Definition Homo sapiens autophagy related 16 like 1 (ATG16L1), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005246086.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
ATGTCGTCGG GCCTCCGCGC CGCTGACTTC CCCCGCTGGA AGCGCCACAT CTCGGAGCAA 
CTGAGGCGCC GGGACCGGCT GCAGAGACAG GCGTTCGAGG AGATCATCCT GCAGTATAAC 
AAATTGCTGG AAAAGTCAGA TCTTCATTCA GTGTTGGCCC AGAAACTACA GGCTGAAAAG 
CATGACGTAC CAAACAGGCA CGAGATAAGG AGGCGGCAAG CCCGGCTGCA GAAAGAGCTT 
GCAGAAGCAG CAAAGGAACC TCTACCAGTC GAACAGGATG ATGACATTGA GGTCATTGTG 
GATGAAACTT CTGATCACAC AGAAGAGACC TCTCCTGTGC GAGCCATCAG CAGAGCAGCC 
ACTAAGCGAC TCTCGCAGCC TGCTGGAGGC CTTCTGGATT CTATCACTAA TATCTTTGGG 
AGACGCTCTG TCTCTTCCTT CCCAGTCCCC CAGGACAATG TGGATACTCA TCCTGGTTCT 
GGTAAAGAAG TGAGGGTACC AGCTACTGCC TTGTGTGTCT TCGATGCACA TGATGGGGAA 
GTCAACGCTG TGCAGTTCAG TCCAGGTTCC CGGTTACTGG CCACTGGAGG CATGGACCGC 
AGGGTTAAGC TTTGGGAAGT ATTTGGAGAA AAATGTGAGT TCAAGGGTTC CCTATCTGGC 
AGTAATGCAG GAATTACAAG CATTGAATTT GATAGTGCTG GATCTTACCT CTTAGCAGCT 
TCAAATGATT TTGCAAGCCG AATCTGGACT GTGGATGATT ATCGATTACG GCACACACTC 
ACGGGACACA GTGGGAAAGT GCTGTCTGCT AAGTTCCTGC TGGACAATGC GCGGATTGTC 
TCAGGAAGTC ACGACCGGAC TCTCAAACTC TGGGATCTAC GCAGCAAAGT CTGCATAAAG 
ACAGTGTTTG CAGGATCCAG TTGCAATGAT ATTGTCTGCA CAGAGCAATG TGTAATGAGT 
GGACATTTTG ACAAGAAAAT TCGTTTCTGG GACATTCGAT CAGAGAGCAT AGTTCGAGAG 
ATGGAGCTGT TGGGAAAGAT TACTGCCCTG GACTTAAACC CAGAAAGGAC TGAGCTCCTG 
AGCTGCTCCC GTGATGACTT GCTAAAAGTT ATTGATCTCC GAACAAATGC TATCAAGCAG 
ACATTCAGTG CACCTGGGTT CAAGTGCGGC TCTGACTGGA CCAGAGTTGT CTTCAGCCCT 
GATGGCAGTT ACGTGGCGGC AGGCTCTGCT GAGGGCTCTC TGTATATCTG GAGTGTGCTC 
ACAGGGAAAG TGGAAAAGGT TCTTTCAAAG CAGCACAGCT CATCCATCAA TGCGGTGGCG 
TGGTCGCCCT CTGGCTCGCA CGTTGTCAGT GTGGACAAAG GATGCAAAGC TGTGCTGTGG 
GCACAGTACT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Structure of the WD40-domain of human ATG16L1.
Protein science : a publication of the Protein Society26(9)1828-1837(2017 Sep)
Bajagic M,Archna A,B?sing P,Scrima A


book

Trimethylamine N-oxide prime NLRP3 inflammasome via inhibiting ATG16L1-induced autophagy in colonic epithelial cells.
Biochemical and biophysical research communications490(2)541-551(2017 08)
Yue C,Yang X,Li J,Chen X,Zhao X,Chen Y,Wen Y


book

Genetic analysis of the ATG16L1 gene promoter in sporadic Parkinson's disease.
Neuroscience letters64630-35(2017 Apr)
Wang L,Huang J,Pang S,Qin X,Qi Z,Hawley RG,Yan B


book

MicroRNA-410 regulates autophagy-related gene ATG16L1 expression and enhances chemosensitivity via autophagy inhibition in osteosarcoma.
Molecular medicine reports15(3)1326-1334(2017 Mar)
Chen R,Li X,He B,Hu W


book

Association of ATG16L1 gene haplotype with inflammatory bowel disease in Indians.
PloS one12(5)e0178291(2017)
Pugazhendhi S,Baskaran K,Santhanam S,Ramakrishna BS