Gene Symbol | TBCCD1 |
Entrez Gene ID | 55171 |
Full Name | TBCC domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » TBCCD1 cDNA ORF clone
gRNAs
Gene Symbol | TBCCD1 |
Entrez Gene ID | 55171 |
Full Name | TBCC domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001286749.1 | NP_001273678.1 | TBCC domain-containing protein 1 isoform b |
NM_018138.5 | NP_060608.1 | TBCC domain-containing protein 1 isoform a |
NM_001134415.1 | NP_001127887.1 | TBCC domain-containing protein 1 isoform a |
NM_018138.4 | NP_060608.1 | TBCC domain-containing protein 1 isoform a |
NM_001286749.2 | NP_001273678.1 | TBCC domain-containing protein 1 isoform b |
Homo sapiens (human) | TBCCD1 | NP_060608.1 |
Pan troglodytes (chimpanzee) | TBCCD1 | XP_003310207.1 |
Canis lupus familiaris (dog) | TBCCD1 | XP_005639862.1 |
Mus musculus (house mouse) | Tbccd1 | NP_001074837.1 |
Rattus norvegicus (Norway rat) | Tbccd1 | NP_001012016.1 |
TBCCD1 | XP_001088550.2 | |
Bos taurus (cattle) | TBCCD1 | NP_001077199.1 |
Gallus gallus (chicken) | TBCCD1 | NP_001006545.1 |
Xenopus tropicalis (tropical clawed frog) | tbccd1 | NP_001016961.2 |
Danio rerio (zebrafish) | tbccd1 | NP_001038617.2 |
Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.
Bailey SD, Xie C, Do R, Montpetit A, Diaz R, Mohan V, Keavney B, Yusuf S, Gerstein HC, Engert JC, Anand S,
Diabetes care33(10)2250-3(2010 Oct)
TBCCD1, a new centrosomal protein, is required for centrosome and Golgi apparatus positioning.
Gon?alves J, Nolasco S, Nascimento R, Lopez Fanarraga M, Zabala JC, Soares H
EMBO reports11(3)194-200(2010 Mar)
Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.
Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE, Hingorani AD, , ,
American journal of human genetics85(5)628-42(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
Title: Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.
Observational study of gene-disease association. (HuGE Navigator)
Title: Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.
The following TBCCD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TBCCD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu00238![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_018138.5 , NM_001134415.1 , NM_018138.4 | |
Accession Version | NM_018138.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | TBCC domain-containing protein 1 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC025748.1, AK124362.1, CA428099.1 and AC068631.16. On Nov 22, 2018 this sequence version replaced NM_018138.4. Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: SRR1803615.111465.1, SRR1660809.71400.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000338733.10/ ENSP00000341652.5 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_060608.1 |
CDS | 117..1790 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00238![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_018138.5 , NM_001134415.1 , NM_018138.4 | |
Accession Version | NM_001134415.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-22 | |
Organism | Homo sapiens(human) | |
Product | TBCC domain-containing protein 1 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB033833.1, BC025748.1, AC068631.16 and CA428099.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Both variants 1 and 2 encode the same isoform. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163657.128495.1, SRR1163655.8900.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001127887.1 |
CDS | 481..2154 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00238![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_018138.5 , NM_001134415.1 , NM_018138.4 | |
Accession Version | NM_018138.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Homo sapiens(human) | |
Product | TBCC domain-containing protein 1 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY017180.1, BC025748.1, AK124362.1, CA428099.1 and AC068631.16. On Nov 15, 2013 this sequence version replaced NM_018138.3. Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: SRR1660809.71400.1, SRR1660803.16784.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_060608.1 |
CDS | 132..1805 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCAGT CCAGAGTTCT CCTCTGGGTG AAAGCAGAAC CCTTTATAGT GGGTGCCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11896 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286749.1 , NM_001286749.2 | |
Accession Version | NM_001286749.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | TBCC domain-containing protein 1 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB033833.1, AK124362.1, BC025748.1, CA428099.1 and AC068631.16. Transcript Variant: This variant (3) lacks part of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (b) has a shorter and distinct N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AK124362.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACAGACC GACTTAAGTT CGGATTCGGC TTCCACCGCT TCTTAGTGCT TTCAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273678.1 |
CDS | 390..1775 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAGACC GACTTAAGTT CGGATTCGGC TTCCACCGCT TCTTAGTGCT TTCAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11896 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286749.1 , NM_001286749.2 | |
Accession Version | NM_001286749.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | TBCC domain-containing protein 1 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK124362.1, BC025748.1, CA428099.1 and AC068631.16. On May 31, 2019 this sequence version replaced NM_001286749.1. Transcript Variant: This variant (3) lacks part of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (b) has a shorter and distinct N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AK124362.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACAGACC GACTTAAGTT CGGATTCGGC TTCCACCGCT TCTTAGTGCT TTCAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273678.1 |
CDS | 165..1550 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAGACC GACTTAAGTT CGGATTCGGC TTCCACCGCT TCTTAGTGCT TTCAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. |
TBCCD1, a new centrosomal protein, is required for centrosome and Golgi apparatus positioning. |
Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. |