×

Pcdh15 cDNA ORF clone, Mus musculus (house mouse)

Gene Symbol Pcdh15
Entrez Gene ID 11994
Full Name protocadherin 15
Synonyms BB078305, ENSMUSG00000046980, Gm9815, Ush1f, av, nmf19
General protein information
Preferred Names
protocadherin-15
Names
protocadherin-15
Ames waltzer
protocadherin 15 CD2
protocadherin 15 CD3 isoform
Gene Type protein-coding
Organism Mus musculus (house mouse)
Genome

10

10 B5.3|10 37.43 cM

Summary lac of sum

mRNA and Protein(s)

mRNA Protein Name
XM_006513143 XP_006513206 protocadherin-15 isoform X1
XM_006513148 XP_006513211 protocadherin-15 isoform X2
XM_006513149 XP_006513212 protocadherin-15 isoform X3
XM_006513151 XP_006513214 protocadherin-15 isoform X4
XM_011243320 XP_011241622 protocadherin-15 isoform X5
XM_006513155 XP_006513218 protocadherin-15 isoform X6
XM_006513156 XP_006513219 protocadherin-15 isoform X7
NM_023115 NP_075604 protocadherin-15 isoform CD1-1 precursor
NM_001142735 NP_001136207 protocadherin-15 isoform CD1-2 precursor
NM_001142736 NP_001136208 protocadherin-15 isoform CD1-4 precursor
NM_001142737 NP_001136209 protocadherin-15 isoform CD1-6 precursor
NM_001142738 NP_001136210 protocadherin-15 isoform CD1-8 precursor
NM_001142739 NP_001136211 protocadherin-15 isoform CD1-9 precursor
NM_001142740 NP_001136212 protocadherin-15 isoform CD1-7 precursor
NM_001142741 NP_001136213 protocadherin-15 isoform CD1-10 precursor
NM_001142742 NP_001136214 protocadherin-15 isoform CD2-1 precursor
NM_001142743 NP_001136215 protocadherin-15 isoform CD2-2 precursor
NM_001142746 NP_001136218 protocadherin-15 isoform CD3-1 precursor
NM_001142747 NP_001136219 protocadherin-15 isoform SI-1 precursor
NM_001142748 NP_001136220 protocadherin-15 isoform SI-2 precursor
NM_001142760 NP_001136232 protocadherin-15 isoform CD3-2 precursor


Homo sapiens (human) PCDH15 NP_001136241.1
Pan troglodytes (chimpanzee) PCDH15 XP_507798.3
Macaca mulatta (Rhesus monkey) PCDH15 XP_002805772.1
Canis lupus familiaris (dog) PCDH15 XP_003433494.1
Bos taurus (cattle) LOC100140108 XP_005225407.1
Mus musculus (house mouse) Pcdh15 NP_001136214.1
Rattus norvegicus (Norway rat) Pcdh15 NP_001258306.1
Gallus gallus (chicken) PCDH15 NP_001038119.1
Danio rerio (zebrafish) pcdh15a NP_001012500.1
Danio rerio (zebrafish) pcdh15b NP_001012504.1
Drosophila melanogaster (fruit fly) Cad99C NP_001189311.1
Caenorhabditis elegans cdh-5 NP_501487.1
Xenopus (Silurana) tropicalis (western clawed frog) pcdh15 XP_004916517.1


GeneRIFs: Gene References Into Functions What's a GeneRIF?

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

The following Pcdh15 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdh15 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price (USD) Select
OMu13166 XM_006513143 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu44154 XM_006513148 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu44155 XM_006513149 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu44156 XM_006513151 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu67190 XM_011243320 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu44160 XM_006513155 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu44161 XM_006513156 PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu13166 NM_023115 Mus musculus protocadherin 15 (Pcdh15), transcript variant A, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu13229 NM_001142735 Mus musculus protocadherin 15 (Pcdh15), transcript variant B, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1427.30
$2039.00
OMu13182 NM_001142736 Mus musculus protocadherin 15 (Pcdh15), transcript variant C, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1427.30
$2039.00
OMu13215 NM_001142737 Mus musculus protocadherin 15 (Pcdh15), transcript variant D, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1371.30
$1959.00
OMu13179 NM_001142738 Mus musculus protocadherin 15 (Pcdh15), transcript variant F, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1399.30
$1999.00
OMu13216 NM_001142739 Mus musculus protocadherin 15 (Pcdh15), transcript variant G, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1413.30
$2019.00
OMu13244 NM_001142740 Mus musculus protocadherin 15 (Pcdh15), transcript variant E, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu13142 NM_001142741 Mus musculus protocadherin 15 (Pcdh15), transcript variant H, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1406.30
$2009.00
OMu13240 NM_001142742 Mus musculus protocadherin 15 (Pcdh15), transcript variant I, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $1315.30
$1879.00
OMu13214 NM_001142743 Mus musculus protocadherin 15 (Pcdh15), transcript variant J, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $888.30
$1269.00
OMu13141 NM_001142746 Mus musculus protocadherin 15 (Pcdh15), transcript variant K, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00
OMu13242 NM_001142747 Mus musculus protocadherin 15 (Pcdh15), transcript variant M, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $692.30
$989.00
OMu13222 NM_001142748 Mus musculus protocadherin 15 (Pcdh15), transcript variant N, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 20 $692.30
$989.00
OMu13136 NM_001142760 Mus musculus protocadherin 15 (Pcdh15), transcript variant L, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 25 $951.30
$1359.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID OMu13166
Clone ID Related Accession (Same CDS sequence) NM_023115 , XM_006513143
Accession Version XM_006513143.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5832bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966504. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAATC TTTTCCTTCT CTACCATTTT GAACAAAGCA GGGGAAATAA CTCAGTCCCA
GAAGACAGGA GCAGTCATCG CGATGGGATG GCCTTTTCCT CCAGTACCAC TGAGTCTCAT
GAGCCAGCTC ATGTAGAGGG ACCACTTAAG GAGAGCCAGC CTAACCCAGC AAGGACGTTC
TCATTTGTTC CTGATGAGGA TAACTTAAGT ACCCATAATC CCCTTTACAT GGAAAGTATA
GGTCAAAGGT CAACAAACTC AGACCTTCAG CCACGAACAG ATTTTGAAGA GCTGTTGGCA
CCCAGAACAC AAGTTAAGAG TCAGTCTCTG AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG
TGGAATCAGT CTGTGAGCTT TCCTAGGCGG CTCATGTGGA AAGCCCCAAA CAGGCCAGAG
ACCATAGACC TGGTGGAGTG GCAGATCACC AATCAGAGAG CTGAATGCGA AAGCGCCAGA
TGCCACCCAA GCCAGAGAGG TAGCAGCAAC GTTCTGCTGG CAACTGAAGA TGCCCACGAG
TCAGAGAAAG AAGGGGGACA CAGAGACACC CTAATCGTCC AGCAAACAGA GCAGCTGAAA
TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC TCTTGGTCTC ACTTTTCTTT CTCAACTCTG
CCAACGATTT CCAGAGCGGT GGAACTCGGG TCGGAACCTA ATGTGGTCAC TTCTCCCGCT
GACTGCACCT TGGAACTTTC TCCTCCTCTG AGACCCCGTA TTTTAAACTC CTTAAGCTCT
AAGAGAGAGA CTCCCACATG TGCATCAGAT ACAGAACCAA AAAGGAACTC TTTTGAGATC
GCTCCCCATC CACCTAGCAT CTCTGCTCCC CTCCCACATC CGCCTCTTCC TAGACCTCCC
ATTGCCTTTA CCACTTTTCC TCTTCCCCTT TCTCCCCCTA ACCCTCCTCC CCCACAACTT
GTTACATTTT CTCTTCCCAT TTCTACACCC CCTACTTCTT CTCTACCTCT TCCTCCTCCA
CTGTCACTTC CTCCTCCTCC TCGGCCACCA GCTCCCCGCC TCTTCCCACA GCCTCCTTCC
ACGTCCATTC CATCCACAGA CAGCATCTCT GCACCAGCTG CTAAATGCAC TGCCAGTGCC
ACACACGCCA GAGAAACCAC GTCTACGACA CAGCCACCAG CATCCAACCC GCAGTGGGGG
GCAGAACCCC ACAGACATCC AAAAGGGATC CTCAGACATG TGAAAAACTT GGCAGAGCTC
GAGAAATCAG TGTCTAACAT GTACAGTCAC ATAGAAAAAA ACTGCCCACC TGCAGATCCC
TCAAAACTAC ACACGTTTTG CCCTGCAGAG AAAACAGGCA TGAAAATCAC ACATGACCAG
AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG GGAATTGACG TGCAACCTCA CAGTCAATCA
ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513206.1
CDS340..6171
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513143
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513143

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAATC TTTTCCTTCT CTACCATTTT GAACAAAGCA GGGGAAATAA CTCAGTCCCA
GAAGACAGGA GCAGTCATCG CGATGGGATG GCCTTTTCCT CCAGTACCAC TGAGTCTCAT
GAGCCAGCTC ATGTAGAGGG ACCACTTAAG GAGAGCCAGC CTAACCCAGC AAGGACGTTC
TCATTTGTTC CTGATGAGGA TAACTTAAGT ACCCATAATC CCCTTTACAT GGAAAGTATA
GGTCAAAGGT CAACAAACTC AGACCTTCAG CCACGAACAG ATTTTGAAGA GCTGTTGGCA
CCCAGAACAC AAGTTAAGAG TCAGTCTCTG AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG
TGGAATCAGT CTGTGAGCTT TCCTAGGCGG CTCATGTGGA AAGCCCCAAA CAGGCCAGAG
ACCATAGACC TGGTGGAGTG GCAGATCACC AATCAGAGAG CTGAATGCGA AAGCGCCAGA
TGCCACCCAA GCCAGAGAGG TAGCAGCAAC GTTCTGCTGG CAACTGAAGA TGCCCACGAG
TCAGAGAAAG AAGGGGGACA CAGAGACACC CTAATCGTCC AGCAAACAGA GCAGCTGAAA
TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC TCTTGGTCTC ACTTTTCTTT CTCAACTCTG
CCAACGATTT CCAGAGCGGT GGAACTCGGG TCGGAACCTA ATGTGGTCAC TTCTCCCGCT
GACTGCACCT TGGAACTTTC TCCTCCTCTG AGACCCCGTA TTTTAAACTC CTTAAGCTCT
AAGAGAGAGA CTCCCACATG TGCATCAGAT ACAGAACCAA AAAGGAACTC TTTTGAGATC
GCTCCCCATC CACCTAGCAT CTCTGCTCCC CTCCCACATC CGCCTCTTCC TAGACCTCCC
ATTGCCTTTA CCACTTTTCC TCTTCCCCTT TCTCCCCCTA ACCCTCCTCC CCCACAACTT
GTTACATTTT CTCTTCCCAT TTCTACACCC CCTACTTCTT CTCTACCTCT TCCTCCTCCA
CTGTCACTTC CTCCTCCTCC TCGGCCACCA GCTCCCCGCC TCTTCCCACA GCCTCCTTCC
ACGTCCATTC CATCCACAGA CAGCATCTCT GCACCAGCTG CTAAATGCAC TGCCAGTGCC
ACACACGCCA GAGAAACCAC GTCTACGACA CAGCCACCAG CATCCAACCC GCAGTGGGGG
GCAGAACCCC ACAGACATCC AAAAGGGATC CTCAGACATG TGAAAAACTT GGCAGAGCTC
GAGAAATCAG TGTCTAACAT GTACAGTCAC ATAGAAAAAA ACTGCCCACC TGCAGATCCC
TCAAAACTAC ACACGTTTTG CCCTGCAGAG AAAACAGGCA TGAAAATCAC ACATGACCAG
AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG GGAATTGACG TGCAACCTCA CAGTCAATCA
ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu44154
Clone ID Related Accession (Same CDS sequence) XM_006513148
Accession Version XM_006513148.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5826bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966515. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATTCTTTTCC TTCTCTACCA TTTTGAACAA AGCAGGGGAA ATAACTCAGT CCCAGAAGAC
AGGAGCAGTC ATCGCGATGG GATGGCCTTT TCCTCCAGTA CCACTGAGTC TCATGAGCCA
GCTCATGTAG AGGGACCACT TAAGGAGAGC CAGCCTAACC CAGCAAGGAC GTTCTCATTT
GTTCCTGATG AGGATAACTT AAGTACCCAT AATCCCCTTT ACATGGAAAG TATAGGTCAA
AGGTCAACAA ACTCAGACCT TCAGCCACGA ACAGATTTTG AAGAGCTGTT GGCACCCAGA
ACACAAGTTA AGAGTCAGTC TCTGAGGGGC CCAAGAGAAA AGATCCAGAG GGTGTGGAAT
CAGTCTGTGA GCTTTCCTAG GCGGCTCATG TGGAAAGCCC CAAACAGGCC AGAGACCATA
GACCTGGTGG AGTGGCAGAT CACCAATCAG AGAGCTGAAT GCGAAAGCGC CAGATGCCAC
CCAAGCCAGA GAGGTAGCAG CAACGTTCTG CTGGCAACTG AAGATGCCCA CGAGTCAGAG
AAAGAAGGGG GACACAGAGA CACCCTAATC GTCCAGCAAA CAGAGCAGCT GAAATCTCTG
TCTTCTGGCT CTTCTTTTTC CTCCTCTTGG TCTCACTTTT CTTTCTCAAC TCTGCCAACG
ATTTCCAGAG CGGTGGAACT CGGGTCGGAA CCTAATGTGG TCACTTCTCC CGCTGACTGC
ACCTTGGAAC TTTCTCCTCC TCTGAGACCC CGTATTTTAA ACTCCTTAAG CTCTAAGAGA
GAGACTCCCA CATGTGCATC AGATACAGAA CCAAAAAGGA ACTCTTTTGA GATCGCTCCC
CATCCACCTA GCATCTCTGC TCCCCTCCCA CATCCGCCTC TTCCTAGACC TCCCATTGCC
TTTACCACTT TTCCTCTTCC CCTTTCTCCC CCTAACCCTC CTCCCCCACA ACTTGTTACA
TTTTCTCTTC CCATTTCTAC ACCCCCTACT TCTTCTCTAC CTCTTCCTCC TCCACTGTCA
CTTCCTCCTC CTCCTCGGCC ACCAGCTCCC CGCCTCTTCC CACAGCCTCC TTCCACGTCC
ATTCCATCCA CAGACAGCAT CTCTGCACCA GCTGCTAAAT GCACTGCCAG TGCCACACAC
GCCAGAGAAA CCACGTCTAC GACACAGCCA CCAGCATCCA ACCCGCAGTG GGGGGCAGAA
CCCCACAGAC ATCCAAAAGG GATCCTCAGA CATGTGAAAA ACTTGGCAGA GCTCGAGAAA
TCAGTGTCTA ACATGTACAG TCACATAGAA AAAAACTGCC CACCTGCAGA TCCCTCAAAA
CTACACACGT TTTGCCCTGC AGAGAAAACA GGCATGAAAA TCACACATGA CCAGAGCCAG
GAAACGTTGG TTAGAGTTGT TGAGGGAATT GACGTGCAAC CTCACAGTCA ATCAACATCT
TTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513211.1
CDS340..6165
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513148
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513148

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATTCTTTTCC TTCTCTACCA TTTTGAACAA AGCAGGGGAA ATAACTCAGT CCCAGAAGAC
AGGAGCAGTC ATCGCGATGG GATGGCCTTT TCCTCCAGTA CCACTGAGTC TCATGAGCCA
GCTCATGTAG AGGGACCACT TAAGGAGAGC CAGCCTAACC CAGCAAGGAC GTTCTCATTT
GTTCCTGATG AGGATAACTT AAGTACCCAT AATCCCCTTT ACATGGAAAG TATAGGTCAA
AGGTCAACAA ACTCAGACCT TCAGCCACGA ACAGATTTTG AAGAGCTGTT GGCACCCAGA
ACACAAGTTA AGAGTCAGTC TCTGAGGGGC CCAAGAGAAA AGATCCAGAG GGTGTGGAAT
CAGTCTGTGA GCTTTCCTAG GCGGCTCATG TGGAAAGCCC CAAACAGGCC AGAGACCATA
GACCTGGTGG AGTGGCAGAT CACCAATCAG AGAGCTGAAT GCGAAAGCGC CAGATGCCAC
CCAAGCCAGA GAGGTAGCAG CAACGTTCTG CTGGCAACTG AAGATGCCCA CGAGTCAGAG
AAAGAAGGGG GACACAGAGA CACCCTAATC GTCCAGCAAA CAGAGCAGCT GAAATCTCTG
TCTTCTGGCT CTTCTTTTTC CTCCTCTTGG TCTCACTTTT CTTTCTCAAC TCTGCCAACG
ATTTCCAGAG CGGTGGAACT CGGGTCGGAA CCTAATGTGG TCACTTCTCC CGCTGACTGC
ACCTTGGAAC TTTCTCCTCC TCTGAGACCC CGTATTTTAA ACTCCTTAAG CTCTAAGAGA
GAGACTCCCA CATGTGCATC AGATACAGAA CCAAAAAGGA ACTCTTTTGA GATCGCTCCC
CATCCACCTA GCATCTCTGC TCCCCTCCCA CATCCGCCTC TTCCTAGACC TCCCATTGCC
TTTACCACTT TTCCTCTTCC CCTTTCTCCC CCTAACCCTC CTCCCCCACA ACTTGTTACA
TTTTCTCTTC CCATTTCTAC ACCCCCTACT TCTTCTCTAC CTCTTCCTCC TCCACTGTCA
CTTCCTCCTC CTCCTCGGCC ACCAGCTCCC CGCCTCTTCC CACAGCCTCC TTCCACGTCC
ATTCCATCCA CAGACAGCAT CTCTGCACCA GCTGCTAAAT GCACTGCCAG TGCCACACAC
GCCAGAGAAA CCACGTCTAC GACACAGCCA CCAGCATCCA ACCCGCAGTG GGGGGCAGAA
CCCCACAGAC ATCCAAAAGG GATCCTCAGA CATGTGAAAA ACTTGGCAGA GCTCGAGAAA
TCAGTGTCTA ACATGTACAG TCACATAGAA AAAAACTGCC CACCTGCAGA TCCCTCAAAA
CTACACACGT TTTGCCCTGC AGAGAAAACA GGCATGAAAA TCACACATGA CCAGAGCCAG
GAAACGTTGG TTAGAGTTGT TGAGGGAATT GACGTGCAAC CTCACAGTCA ATCAACATCT
TTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu44155
Clone ID Related Accession (Same CDS sequence) XM_006513149
Accession Version XM_006513149.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5823bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X3
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966517. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATGCATAAT
CTTTTCCTTC TCTACCATTT TGAACAAAGC AGGGGAAATA ACTCAGTCCC AGAAGACAGG
AGCAGTCATC GCGATGGGAT GGCCTTTTCC TCCAGTACCA CTGAGTCTCA TGAGCCAGCT
CATGTAGAGG GACCACTTAA GGAGAGCCAG CCTAACCCAG CAAGGACGTT CTCATTTGTT
CCTGATGAGG ATAACTTAAG TACCCATAAT CCCCTTTACA TGGAAAGTAT AGGTCAAAGG
TCAACAAACT CAGACCTTCA GCCACGAACA GATTTTGAAG AGCTGTTGGC ACCCAGAACA
CAAGTTAAGA GTCAGTCTCT GAGGGGCCCA AGAGAAAAGA TCCAGAGGGT GTGGAATCAG
TCTGTGAGCT TTCCTAGGCG GCTCATGTGG AAAGCCCCAA ACAGGCCAGA GACCATAGAC
CTGGTGGAGT GGCAGATCAC CAATCAGAGA GCTGAATGCG AAAGCGCCAG ATGCCACCCA
AGCCAGAGAG GTAGCAGCAA CGTTCTGCTG GCAACTGAAG ATGCCCACGA GTCAGAGAAA
GAAGGGGGAC ACAGAGACAC CCTAATCGTC CAGCAAACAG AGCAGCTGAA ATCTCTGTCT
TCTGGCTCTT CTTTTTCCTC CTCTTGGTCT CACTTTTCTT TCTCAACTCT GCCAACGATT
TCCAGAGCGG TGGAACTCGG GTCGGAACCT AATGTGGTCA CTTCTCCCGC TGACTGCACC
TTGGAACTTT CTCCTCCTCT GAGACCCCGT ATTTTAAACT CCTTAAGCTC TAAGAGAGAG
ACTCCCACAT GTGCATCAGA TACAGAACCA AAAAGGAACT CTTTTGAGAT CGCTCCCCAT
CCACCTAGCA TCTCTGCTCC CCTCCCACAT CCGCCTCTTC CTAGACCTCC CATTGCCTTT
ACCACTTTTC CTCTTCCCCT TTCTCCCCCT AACCCTCCTC CCCCACAACT TGTTACATTT
TCTCTTCCCA TTTCTACACC CCCTACTTCT TCTCTACCTC TTCCTCCTCC ACTGTCACTT
CCTCCTCCTC CTCGGCCACC AGCTCCCCGC CTCTTCCCAC AGCCTCCTTC CACGTCCATT
CCATCCACAG ACAGCATCTC TGCACCAGCT GCTAAATGCA CTGCCAGTGC CACACACGCC
AGAGAAACCA CGTCTACGAC ACAGCCACCA GCATCCAACC CGCAGTGGGG GGCAGAACCC
CACAGACATC CAAAAGGGAT CCTCAGACAT GTGAAAAACT TGGCAGAGCT CGAGAAATCA
GTGTCTAACA TGTACAGTCA CATAGAAAAA AACTGCCCAC CTGCAGATCC CTCAAAACTA
CACACGTTTT GCCCTGCAGA GAAAACAGGC ATGAAAATCA CACATGACCA GAGCCAGGAA
ACGTTGGTTA GAGTTGTTGA GGGAATTGAC GTGCAACCTC ACAGTCAATC AACATCTTTG
TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513212.1
CDS340..6162
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513149
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513149

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATGCATAAT
CTTTTCCTTC TCTACCATTT TGAACAAAGC AGGGGAAATA ACTCAGTCCC AGAAGACAGG
AGCAGTCATC GCGATGGGAT GGCCTTTTCC TCCAGTACCA CTGAGTCTCA TGAGCCAGCT
CATGTAGAGG GACCACTTAA GGAGAGCCAG CCTAACCCAG CAAGGACGTT CTCATTTGTT
CCTGATGAGG ATAACTTAAG TACCCATAAT CCCCTTTACA TGGAAAGTAT AGGTCAAAGG
TCAACAAACT CAGACCTTCA GCCACGAACA GATTTTGAAG AGCTGTTGGC ACCCAGAACA
CAAGTTAAGA GTCAGTCTCT GAGGGGCCCA AGAGAAAAGA TCCAGAGGGT GTGGAATCAG
TCTGTGAGCT TTCCTAGGCG GCTCATGTGG AAAGCCCCAA ACAGGCCAGA GACCATAGAC
CTGGTGGAGT GGCAGATCAC CAATCAGAGA GCTGAATGCG AAAGCGCCAG ATGCCACCCA
AGCCAGAGAG GTAGCAGCAA CGTTCTGCTG GCAACTGAAG ATGCCCACGA GTCAGAGAAA
GAAGGGGGAC ACAGAGACAC CCTAATCGTC CAGCAAACAG AGCAGCTGAA ATCTCTGTCT
TCTGGCTCTT CTTTTTCCTC CTCTTGGTCT CACTTTTCTT TCTCAACTCT GCCAACGATT
TCCAGAGCGG TGGAACTCGG GTCGGAACCT AATGTGGTCA CTTCTCCCGC TGACTGCACC
TTGGAACTTT CTCCTCCTCT GAGACCCCGT ATTTTAAACT CCTTAAGCTC TAAGAGAGAG
ACTCCCACAT GTGCATCAGA TACAGAACCA AAAAGGAACT CTTTTGAGAT CGCTCCCCAT
CCACCTAGCA TCTCTGCTCC CCTCCCACAT CCGCCTCTTC CTAGACCTCC CATTGCCTTT
ACCACTTTTC CTCTTCCCCT TTCTCCCCCT AACCCTCCTC CCCCACAACT TGTTACATTT
TCTCTTCCCA TTTCTACACC CCCTACTTCT TCTCTACCTC TTCCTCCTCC ACTGTCACTT
CCTCCTCCTC CTCGGCCACC AGCTCCCCGC CTCTTCCCAC AGCCTCCTTC CACGTCCATT
CCATCCACAG ACAGCATCTC TGCACCAGCT GCTAAATGCA CTGCCAGTGC CACACACGCC
AGAGAAACCA CGTCTACGAC ACAGCCACCA GCATCCAACC CGCAGTGGGG GGCAGAACCC
CACAGACATC CAAAAGGGAT CCTCAGACAT GTGAAAAACT TGGCAGAGCT CGAGAAATCA
GTGTCTAACA TGTACAGTCA CATAGAAAAA AACTGCCCAC CTGCAGATCC CTCAAAACTA
CACACGTTTT GCCCTGCAGA GAAAACAGGC ATGAAAATCA CACATGACCA GAGCCAGGAA
ACGTTGGTTA GAGTTGTTGA GGGAATTGAC GTGCAACCTC ACAGTCAATC AACATCTTTG
TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu44156
Clone ID Related Accession (Same CDS sequence) XM_006513151
Accession Version XM_006513151.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5817bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X4
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966521. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATTCTTTTC
CTTCTCTACC ATTTTGAACA AAGCAGGGGA AATAACTCAG TCCCAGAAGA CAGGAGCAGT
CATCGCGATG GGATGGCCTT TTCCTCCAGT ACCACTGAGT CTCATGAGCC AGCTCATGTA
GAGGGACCAC TTAAGGAGAG CCAGCCTAAC CCAGCAAGGA CGTTCTCATT TGTTCCTGAT
GAGGATAACT TAAGTACCCA TAATCCCCTT TACATGGAAA GTATAGGTCA AAGGTCAACA
AACTCAGACC TTCAGCCACG AACAGATTTT GAAGAGCTGT TGGCACCCAG AACACAAGTT
AAGAGTCAGT CTCTGAGGGG CCCAAGAGAA AAGATCCAGA GGGTGTGGAA TCAGTCTGTG
AGCTTTCCTA GGCGGCTCAT GTGGAAAGCC CCAAACAGGC CAGAGACCAT AGACCTGGTG
GAGTGGCAGA TCACCAATCA GAGAGCTGAA TGCGAAAGCG CCAGATGCCA CCCAAGCCAG
AGAGGTAGCA GCAACGTTCT GCTGGCAACT GAAGATGCCC ACGAGTCAGA GAAAGAAGGG
GGACACAGAG ACACCCTAAT CGTCCAGCAA ACAGAGCAGC TGAAATCTCT GTCTTCTGGC
TCTTCTTTTT CCTCCTCTTG GTCTCACTTT TCTTTCTCAA CTCTGCCAAC GATTTCCAGA
GCGGTGGAAC TCGGGTCGGA ACCTAATGTG GTCACTTCTC CCGCTGACTG CACCTTGGAA
CTTTCTCCTC CTCTGAGACC CCGTATTTTA AACTCCTTAA GCTCTAAGAG AGAGACTCCC
ACATGTGCAT CAGATACAGA ACCAAAAAGG AACTCTTTTG AGATCGCTCC CCATCCACCT
AGCATCTCTG CTCCCCTCCC ACATCCGCCT CTTCCTAGAC CTCCCATTGC CTTTACCACT
TTTCCTCTTC CCCTTTCTCC CCCTAACCCT CCTCCCCCAC AACTTGTTAC ATTTTCTCTT
CCCATTTCTA CACCCCCTAC TTCTTCTCTA CCTCTTCCTC CTCCACTGTC ACTTCCTCCT
CCTCCTCGGC CACCAGCTCC CCGCCTCTTC CCACAGCCTC CTTCCACGTC CATTCCATCC
ACAGACAGCA TCTCTGCACC AGCTGCTAAA TGCACTGCCA GTGCCACACA CGCCAGAGAA
ACCACGTCTA CGACACAGCC ACCAGCATCC AACCCGCAGT GGGGGGCAGA ACCCCACAGA
CATCCAAAAG GGATCCTCAG ACATGTGAAA AACTTGGCAG AGCTCGAGAA ATCAGTGTCT
AACATGTACA GTCACATAGA AAAAAACTGC CCACCTGCAG ATCCCTCAAA ACTACACACG
TTTTGCCCTG CAGAGAAAAC AGGCATGAAA ATCACACATG ACCAGAGCCA GGAAACGTTG
GTTAGAGTTG TTGAGGGAAT TGACGTGCAA CCTCACAGTC AATCAACATC TTTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513214.1
CDS340..6156
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513151
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513151

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATTCTTTTC
CTTCTCTACC ATTTTGAACA AAGCAGGGGA AATAACTCAG TCCCAGAAGA CAGGAGCAGT
CATCGCGATG GGATGGCCTT TTCCTCCAGT ACCACTGAGT CTCATGAGCC AGCTCATGTA
GAGGGACCAC TTAAGGAGAG CCAGCCTAAC CCAGCAAGGA CGTTCTCATT TGTTCCTGAT
GAGGATAACT TAAGTACCCA TAATCCCCTT TACATGGAAA GTATAGGTCA AAGGTCAACA
AACTCAGACC TTCAGCCACG AACAGATTTT GAAGAGCTGT TGGCACCCAG AACACAAGTT
AAGAGTCAGT CTCTGAGGGG CCCAAGAGAA AAGATCCAGA GGGTGTGGAA TCAGTCTGTG
AGCTTTCCTA GGCGGCTCAT GTGGAAAGCC CCAAACAGGC CAGAGACCAT AGACCTGGTG
GAGTGGCAGA TCACCAATCA GAGAGCTGAA TGCGAAAGCG CCAGATGCCA CCCAAGCCAG
AGAGGTAGCA GCAACGTTCT GCTGGCAACT GAAGATGCCC ACGAGTCAGA GAAAGAAGGG
GGACACAGAG ACACCCTAAT CGTCCAGCAA ACAGAGCAGC TGAAATCTCT GTCTTCTGGC
TCTTCTTTTT CCTCCTCTTG GTCTCACTTT TCTTTCTCAA CTCTGCCAAC GATTTCCAGA
GCGGTGGAAC TCGGGTCGGA ACCTAATGTG GTCACTTCTC CCGCTGACTG CACCTTGGAA
CTTTCTCCTC CTCTGAGACC CCGTATTTTA AACTCCTTAA GCTCTAAGAG AGAGACTCCC
ACATGTGCAT CAGATACAGA ACCAAAAAGG AACTCTTTTG AGATCGCTCC CCATCCACCT
AGCATCTCTG CTCCCCTCCC ACATCCGCCT CTTCCTAGAC CTCCCATTGC CTTTACCACT
TTTCCTCTTC CCCTTTCTCC CCCTAACCCT CCTCCCCCAC AACTTGTTAC ATTTTCTCTT
CCCATTTCTA CACCCCCTAC TTCTTCTCTA CCTCTTCCTC CTCCACTGTC ACTTCCTCCT
CCTCCTCGGC CACCAGCTCC CCGCCTCTTC CCACAGCCTC CTTCCACGTC CATTCCATCC
ACAGACAGCA TCTCTGCACC AGCTGCTAAA TGCACTGCCA GTGCCACACA CGCCAGAGAA
ACCACGTCTA CGACACAGCC ACCAGCATCC AACCCGCAGT GGGGGGCAGA ACCCCACAGA
CATCCAAAAG GGATCCTCAG ACATGTGAAA AACTTGGCAG AGCTCGAGAA ATCAGTGTCT
AACATGTACA GTCACATAGA AAAAAACTGC CCACCTGCAG ATCCCTCAAA ACTACACACG
TTTTGCCCTG CAGAGAAAAC AGGCATGAAA ATCACACATG ACCAGAGCCA GGAAACGTTG
GTTAGAGTTG TTGAGGGAAT TGACGTGCAA CCTCACAGTC AATCAACATC TTTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu67190
Clone ID Related Accession (Same CDS sequence) XM_011243320
Accession Version XM_011243320.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5493bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X5
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
GTGCCACCTG GTGGAGTTCC TACAAAAGAT CCAGAGCTCC ACCTCTTCCT GAATGACTAC
ACCTCGGTCT TCACTGTGAC ACCCACTGGT ATCACCCGCT ACCTCACCCT GCTTCAACCT
GTGGACAGGG AGGAACAGCA AACCTACACC TTTCTGATAA CAGCGTTTGA TGGCGTGCAA
GAAAGTGAGC CAGTCGTGGT CAATATCCGA GTGATGGATG CAAATGATAA CACGCCCACC
TTCCCTGAAA TCTCCTATGA TGTCTATGTT TACACAGACA TGAGTCCTGG GGACAGCGTC
ATTCAGCTGA CAGCGGTAGA TGCTGATGAA GGCTCTAATG GGGAGATCTC CTATGAAATA
CTGGTGGGGG GCAAGGGAGA CTTCGTGATC AACAAGACCA CAGGGCTGGT GAGCATTGCA
CCAGGCGTGG AGCTGATCGT GGGACAGACG TATGCGCTCA CAGTGCAGGC TTCGGACAAC
GCCCCGCCTG CAGAAAGAAG GCACTCCATC TGCACAGTGT ACATCGAGGT GCTTCCTCCT
AACAACCAGA GCCCTCCCCG CTTCCCGCAG CTGATGTACA GTCTGGAAGT CAGCGAGGCC
ATGAGGATCG GTGCTATTTT ATTAAATCTA CAGGCAACTG ATCGAGAGGG AGATCCAATC
ACATATGCCA TCGAGAATGG AGACCCTCAG AGAGTTTTTA ATCTTTCAGA AACCACAGGG
ATTCTCAGCC TAGGGAAGGC TCTAGACCGC GAGAGCACAG ACCGCTACAT CCTCATCGTC
ACAGCCTCAG ATGGCAGACC GGATGGAACC TCAACTGCCA CTGTGAACAT AGTGGTGACG
GACGTCAATG ACAACGCTCC CGTGTTCGAT CCCTATCTGC CCAGGAACCT CTCTGTGGTG
GAGGAAGAAG CCAATGCCTT TGTGGGTCAA GTCCGGGCAA CAGACCCAGA TGCTGGGATA
AACGGCCAAG TTCACTACAG CCTGGGGAAC TTCAACAACC TCTTCCGCAT CACATCCAAC
GGGAGCATTT ACACAGCCGT GAAGCTGAAC AGGGAAGCCA GGGACCACTA TGAACTGGTT
GTCGTGGCAA CAGATGGAGC AGTCCACCCT CGACATTCAA CTCTGACACT GTACATCAAG
GTGTTGGACA TTGATGATAA CAGTCCTGTT TTTACCAATT CAACGTACAC AGTTGTCGTT
GAAGAGAATC TGCCAGCCGG GACCTCCTTT CTTCAAATAG AGGCCAAGGA TGTTGACCTT
GGAGCCAATG TGTCATATCG GATCAGAAGC CCAGAAGTGA AACACCTTTT TGCACTGCAT
CCATTCACTG GAGAATTGTC TCTTCTGAGG AGTTTGGATT ATGAGGCCTT TCCGGACCAG
GAGGCAAGCA TCACATTCTT GGTGGAGGCC TTTGACATTT ATGGGACTAT GCCACCTGGT
ATAGCAACAG TCACGGTAAT TGTGAAGGAC ATGAATGACT ACCCTCCAGT GTTTAGCAAA
CGCATCTACA AGGGGATGGT GGCTCCAGAT GCAGTCAAGG GGACACCAAT CACCACCGTT
TATGCTGAAG ATGCGGACCC ACCTGGGATG CCTGCAAGTA GGGTGAGGTA TCGAGTGGAC
GACGTGCAGT TTCCATACCC AGCCAGTATT TTTGATGTAG AGGAAGATTC TGGAAGAGTA
GTAACCCGCG TCAATCTTAA TGAAGAGCCT ACTACGATTT TCAAGCTGGT GGTTGTGGCT
TTTGATGACG GCGAACCTGT GATGTCCAGC AGTGCCACGG TGAGAATTCT TGTCTTACAT
CCTGGAGAGA TCCCACGCTT CACCCAAGAG GAATACAGAC CTCCTCCTGT AAGTGAGCTT
GCGGCCAGAG GGACTGTAGT TGGTGTCATT TCTGCTGCTG CCATTAATCA GAGCATCGTG
TACTCCATTG TGGCAGGAAA TGAGGAAGAC AAGTTTGGAA TCAACAATGT CACTGGGGTC
ATCTATGTGA ATTCACCATT GGATTACGAG ACAAGGACCA GCTATGTGCT CCGGGTACAA
GCAGATTCTC TGGAAGTGGT CCTTGCCAAT CTCCGAGTCC CTTCAAAAAG CAATACAGCT
AAGGTGTACA TTGAGATTCA GGATGAAAAC GATCACCCCC CAGTGTTCCA GAAGAAATTC
TACATTGGAG GTGTGTCTGA AGACGCAAGG ATGTTCGCAT CTGTGCTCAG AGTGAAGGCC
ACCGACAGGG ACACGGGTAA TTACAGTGCC ATGGCCTACC GGCTCATCAT ACCGCCGATT
AAAGAGGGCA AAGAGGGGTT TGTGGTGGAA ACATACACAG GTCTCATCAA GACAGCCATG
CTCTTCCACA ATATGAGAAG ATCCTACTTC AAGTTTCAAG TGATTGCAAC TGACGACTAC
GGGAAGGGGT TGAGCGGGAA AGCAGACGTA CTGGTCTCCG TGGTCAATCA ACTGGATATG
CAGGTCATTG TCTCCAATGT GCCCCCTACA CTAGTGGAAA AGAAGATAGA AGACCTTACA
GAGATTTTGG ATCGCTACGT TCAGGAGCAA ATTCCTGGTG CCAAGGTTGT GGTGGAGTCC
ATAGGTGCCC GTCGCCATGG AGACGCCTAC TCCCTAGAAG ACTATAGCAA GTGCGACCTG
ACTGTCTATG CCATCGACCC GCAGACCAAC AGAGCCATCG ACAGAAATGA GCTTTTTAAG
TTCCTGGACG GCAAACTGCT CGATATCAAT AAAGACTTCC AGCCGTATTA CGGGGAAGGA
GGGCGCATTC TGGAGATTCG GACACCTGAG GCAGTGACGA GCATCAAGAA GCGAGGAGAA
AGCTTGGGGT ACACAGAAGG GGCCTTGCTG GCCTTGGCCT TCATCATCAT CCTCTGTTGC
ATCCCAGCCA TCTTGGTCGT CTTAGTAAGC TACCGACAGT TTAAAGTACG CCAGGCTGAG
TGCACGAAGA CCGCAAGAAT TCAGTCTGCT ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA
CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG CCACCACCAC CACCAGGAGC ACATCTCTAT
GAAGAACTGG GAGAGAGCGC AATGGGAGGC TTTGCACCAG AGCATCAACT GCTGAGACCT
TCTCTTCTTA AACCGGAGGA GTTATCCATG GAATCTGGGA TTGATCCTGG CCAGGAATAT
GGACAAGATT ATTACAGTTA TGAGCATGGG TATGAGATGC CCCAGTATGG AAGTCGCCGT
CGACTGCTGC CACCTGCTGG ACAGGAGGAA TACGGCGAAG TCATTGGTGA AGCTGAAGAG
GAATATGAAG AAGAAGAGGT AGAGCCAGAG AAAGTTAAAA AACCCAAAGT TGAAATTAGA
GAGCCTAGTG AGGAGGAGGT GGTAGTCACC GTTGAGAAGC CACCAGCGGC TGAGCCCACA
TACCCAACGT GGAAGAGAGC CAGGATATTC CCGATGATTT TTAAGAAAGT CAGAGGTCTC
GCTGAGAAAA GAGGCATTGA CCTTGAGGGC GAGGAGTGGA GGAGGCGCCT TGATGAAGAA
GACAAAGACT ATCTTCAACT GACTCTAGAC CAGGAGGAAG CTACCGAAAG CACCGTGGAG
TCAGAGGAGG AGTCCAGCGA CTACACAGAA TACACAGAAA CGGAGTCCGA GTTCAGCGAG
TCCGAGACAA CTGAAGAATC AGAGTCGGAG ACCCCATCTG AGGAAGCGGA GGAGAGCTCT
ACCCCGGAGT CAGAGGAGTC TGAGTCCACT GAGTCAGAGG GAGAGAAAGC AAGAAAAAAC
ATCGTGCTAG CTAGAAGAAG GCCTGTGGTC GAGGAAATCC AGGAGGTGAA AGGTAAGAGA
GAGGAGCCCC CGGTGGAAGA GGAAGAAGAG CCCCCACTAG AGGAGGAAGA ACGGGCAGAG
GAAGGAGAAG AAAGCGAAGC AGCTCCCATG GATGAGTCCA CAGACCTGGA GGCTCAGGAT
GTCCCAGAGG AGGGCAGTGC AGAATCAGTC TCCATGGAGA GGGGCGTGGA AAGTGAGGAG
TCAGAGTCAG AACTGAGCAG CAGCAGCAGT ACCAGTGAGA GTCTCTCCGG AGGCCCCTGG
GGCTTTCAGG TGCCAGAATA TGACAGAAGG AAGGATGAAG AGCCCAAGAA ATCTCCAGGC
GCAAACTCCG AAGGTTACAA CACAGCCCTT TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011241622.1
CDS340..5832
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1890(+)
Misc Feature(6)1570..1887(+)
Misc Feature(7)1912..2202(+)
Misc Feature(8)1933..2202(+)
Misc Feature(9)2236..2514(+)
Misc Feature(10)2254..2511(+)
Misc Feature(11)2539..2820(+)
Misc Feature(12)2560..2817(+)
Misc Feature(13)2842..3138(+)
Misc Feature(14)2863..3138(+)
Misc Feature(15)3163..3456(+)
Misc Feature(16)3184..3366(+)
Misc Feature(17)3508..3795(+)
Misc Feature(18)3514..3792(+)
Misc Feature(19)3820..4104(+)
Misc Feature(20)3838..4014(+)
Translation

Target ORF information:

RefSeq Version XM_011243320
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_011243320

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
GTGCCACCTG GTGGAGTTCC TACAAAAGAT CCAGAGCTCC ACCTCTTCCT GAATGACTAC
ACCTCGGTCT TCACTGTGAC ACCCACTGGT ATCACCCGCT ACCTCACCCT GCTTCAACCT
GTGGACAGGG AGGAACAGCA AACCTACACC TTTCTGATAA CAGCGTTTGA TGGCGTGCAA
GAAAGTGAGC CAGTCGTGGT CAATATCCGA GTGATGGATG CAAATGATAA CACGCCCACC
TTCCCTGAAA TCTCCTATGA TGTCTATGTT TACACAGACA TGAGTCCTGG GGACAGCGTC
ATTCAGCTGA CAGCGGTAGA TGCTGATGAA GGCTCTAATG GGGAGATCTC CTATGAAATA
CTGGTGGGGG GCAAGGGAGA CTTCGTGATC AACAAGACCA CAGGGCTGGT GAGCATTGCA
CCAGGCGTGG AGCTGATCGT GGGACAGACG TATGCGCTCA CAGTGCAGGC TTCGGACAAC
GCCCCGCCTG CAGAAAGAAG GCACTCCATC TGCACAGTGT ACATCGAGGT GCTTCCTCCT
AACAACCAGA GCCCTCCCCG CTTCCCGCAG CTGATGTACA GTCTGGAAGT CAGCGAGGCC
ATGAGGATCG GTGCTATTTT ATTAAATCTA CAGGCAACTG ATCGAGAGGG AGATCCAATC
ACATATGCCA TCGAGAATGG AGACCCTCAG AGAGTTTTTA ATCTTTCAGA AACCACAGGG
ATTCTCAGCC TAGGGAAGGC TCTAGACCGC GAGAGCACAG ACCGCTACAT CCTCATCGTC
ACAGCCTCAG ATGGCAGACC GGATGGAACC TCAACTGCCA CTGTGAACAT AGTGGTGACG
GACGTCAATG ACAACGCTCC CGTGTTCGAT CCCTATCTGC CCAGGAACCT CTCTGTGGTG
GAGGAAGAAG CCAATGCCTT TGTGGGTCAA GTCCGGGCAA CAGACCCAGA TGCTGGGATA
AACGGCCAAG TTCACTACAG CCTGGGGAAC TTCAACAACC TCTTCCGCAT CACATCCAAC
GGGAGCATTT ACACAGCCGT GAAGCTGAAC AGGGAAGCCA GGGACCACTA TGAACTGGTT
GTCGTGGCAA CAGATGGAGC AGTCCACCCT CGACATTCAA CTCTGACACT GTACATCAAG
GTGTTGGACA TTGATGATAA CAGTCCTGTT TTTACCAATT CAACGTACAC AGTTGTCGTT
GAAGAGAATC TGCCAGCCGG GACCTCCTTT CTTCAAATAG AGGCCAAGGA TGTTGACCTT
GGAGCCAATG TGTCATATCG GATCAGAAGC CCAGAAGTGA AACACCTTTT TGCACTGCAT
CCATTCACTG GAGAATTGTC TCTTCTGAGG AGTTTGGATT ATGAGGCCTT TCCGGACCAG
GAGGCAAGCA TCACATTCTT GGTGGAGGCC TTTGACATTT ATGGGACTAT GCCACCTGGT
ATAGCAACAG TCACGGTAAT TGTGAAGGAC ATGAATGACT ACCCTCCAGT GTTTAGCAAA
CGCATCTACA AGGGGATGGT GGCTCCAGAT GCAGTCAAGG GGACACCAAT CACCACCGTT
TATGCTGAAG ATGCGGACCC ACCTGGGATG CCTGCAAGTA GGGTGAGGTA TCGAGTGGAC
GACGTGCAGT TTCCATACCC AGCCAGTATT TTTGATGTAG AGGAAGATTC TGGAAGAGTA
GTAACCCGCG TCAATCTTAA TGAAGAGCCT ACTACGATTT TCAAGCTGGT GGTTGTGGCT
TTTGATGACG GCGAACCTGT GATGTCCAGC AGTGCCACGG TGAGAATTCT TGTCTTACAT
CCTGGAGAGA TCCCACGCTT CACCCAAGAG GAATACAGAC CTCCTCCTGT AAGTGAGCTT
GCGGCCAGAG GGACTGTAGT TGGTGTCATT TCTGCTGCTG CCATTAATCA GAGCATCGTG
TACTCCATTG TGGCAGGAAA TGAGGAAGAC AAGTTTGGAA TCAACAATGT CACTGGGGTC
ATCTATGTGA ATTCACCATT GGATTACGAG ACAAGGACCA GCTATGTGCT CCGGGTACAA
GCAGATTCTC TGGAAGTGGT CCTTGCCAAT CTCCGAGTCC CTTCAAAAAG CAATACAGCT
AAGGTGTACA TTGAGATTCA GGATGAAAAC GATCACCCCC CAGTGTTCCA GAAGAAATTC
TACATTGGAG GTGTGTCTGA AGACGCAAGG ATGTTCGCAT CTGTGCTCAG AGTGAAGGCC
ACCGACAGGG ACACGGGTAA TTACAGTGCC ATGGCCTACC GGCTCATCAT ACCGCCGATT
AAAGAGGGCA AAGAGGGGTT TGTGGTGGAA ACATACACAG GTCTCATCAA GACAGCCATG
CTCTTCCACA ATATGAGAAG ATCCTACTTC AAGTTTCAAG TGATTGCAAC TGACGACTAC
GGGAAGGGGT TGAGCGGGAA AGCAGACGTA CTGGTCTCCG TGGTCAATCA ACTGGATATG
CAGGTCATTG TCTCCAATGT GCCCCCTACA CTAGTGGAAA AGAAGATAGA AGACCTTACA
GAGATTTTGG ATCGCTACGT TCAGGAGCAA ATTCCTGGTG CCAAGGTTGT GGTGGAGTCC
ATAGGTGCCC GTCGCCATGG AGACGCCTAC TCCCTAGAAG ACTATAGCAA GTGCGACCTG
ACTGTCTATG CCATCGACCC GCAGACCAAC AGAGCCATCG ACAGAAATGA GCTTTTTAAG
TTCCTGGACG GCAAACTGCT CGATATCAAT AAAGACTTCC AGCCGTATTA CGGGGAAGGA
GGGCGCATTC TGGAGATTCG GACACCTGAG GCAGTGACGA GCATCAAGAA GCGAGGAGAA
AGCTTGGGGT ACACAGAAGG GGCCTTGCTG GCCTTGGCCT TCATCATCAT CCTCTGTTGC
ATCCCAGCCA TCTTGGTCGT CTTAGTAAGC TACCGACAGT TTAAAGTACG CCAGGCTGAG
TGCACGAAGA CCGCAAGAAT TCAGTCTGCT ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA
CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG CCACCACCAC CACCAGGAGC ACATCTCTAT
GAAGAACTGG GAGAGAGCGC AATGGGAGGC TTTGCACCAG AGCATCAACT GCTGAGACCT
TCTCTTCTTA AACCGGAGGA GTTATCCATG GAATCTGGGA TTGATCCTGG CCAGGAATAT
GGACAAGATT ATTACAGTTA TGAGCATGGG TATGAGATGC CCCAGTATGG AAGTCGCCGT
CGACTGCTGC CACCTGCTGG ACAGGAGGAA TACGGCGAAG TCATTGGTGA AGCTGAAGAG
GAATATGAAG AAGAAGAGGT AGAGCCAGAG AAAGTTAAAA AACCCAAAGT TGAAATTAGA
GAGCCTAGTG AGGAGGAGGT GGTAGTCACC GTTGAGAAGC CACCAGCGGC TGAGCCCACA
TACCCAACGT GGAAGAGAGC CAGGATATTC CCGATGATTT TTAAGAAAGT CAGAGGTCTC
GCTGAGAAAA GAGGCATTGA CCTTGAGGGC GAGGAGTGGA GGAGGCGCCT TGATGAAGAA
GACAAAGACT ATCTTCAACT GACTCTAGAC CAGGAGGAAG CTACCGAAAG CACCGTGGAG
TCAGAGGAGG AGTCCAGCGA CTACACAGAA TACACAGAAA CGGAGTCCGA GTTCAGCGAG
TCCGAGACAA CTGAAGAATC AGAGTCGGAG ACCCCATCTG AGGAAGCGGA GGAGAGCTCT
ACCCCGGAGT CAGAGGAGTC TGAGTCCACT GAGTCAGAGG GAGAGAAAGC AAGAAAAAAC
ATCGTGCTAG CTAGAAGAAG GCCTGTGGTC GAGGAAATCC AGGAGGTGAA AGGTAAGAGA
GAGGAGCCCC CGGTGGAAGA GGAAGAAGAG CCCCCACTAG AGGAGGAAGA ACGGGCAGAG
GAAGGAGAAG AAAGCGAAGC AGCTCCCATG GATGAGTCCA CAGACCTGGA GGCTCAGGAT
GTCCCAGAGG AGGGCAGTGC AGAATCAGTC TCCATGGAGA GGGGCGTGGA AAGTGAGGAG
TCAGAGTCAG AACTGAGCAG CAGCAGCAGT ACCAGTGAGA GTCTCTCCGG AGGCCCCTGG
GGCTTTCAGG TGCCAGAATA TGACAGAAGG AAGGATGAAG AGCCCAAGAA ATCTCCAGGC
GCAAACTCCG AAGGTTACAA CACAGCCCTT TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu44160
Clone ID Related Accession (Same CDS sequence) XM_006513155
Accession Version XM_006513155.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5043bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X6
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966529. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGTATGAGA TGCCCCAGTA TGGAAGTCGC CGTCGACTGC TGCCACCTGC TGGACAGGAG
GAATACGGCG AAGTCATTGG TGAAGCTGAA GAGGAATATG AAGAAGAAGA GTGGGCAAGA
AAAAGAATGA TCAAGTTGGT GGTCGATCGG GAGTATGAGA GCAGCTCACC TGGGGAAGAC
AGCGCTCCTG AGTCGCAGAG AAGCAGAACT CACAAGCCCA GTGGCCGCAG CAATGTCAAC
GGCAACATCT ACATTGCGCA GAATGGTTCC GTGGTGAGAA CACGCCGTGC CTGCGTCGCT
GATAACTTGA AGGTGCCCTC CCCTGGGTTG CTTGGGAGGC ATCTGAAGAA ATTAGACACA
TTGGCAGGGA CACGTGAAGA GAATGTGCCC CTGAACACAC TGTTCAAGGG GCCATTTTCC
ACAGAGAAAG CGAAAAGAAC CCCAACTCTG GTCACGTTTG CCCCGTGCCC CGTGGTGGCT
GAGCACTCGG CAGTGAAGCC ATCAGGGACC AGGCTGAAAC ACACAGCTGA GCAGGAGTCC
ATGGTAGACA GTAGGCTCTC CAGAGAGTCG ATGGAATTCC ACGGTGACAG CGCGCCATCA
GATGAGGAGG AGCTCTGGAT GGGTCCGTGG AACAGCCTCC ACATACCAAT GACAAAACTC
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513218.1
CDS340..5382
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513155
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X6, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513155

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGTATGAGA TGCCCCAGTA TGGAAGTCGC CGTCGACTGC TGCCACCTGC TGGACAGGAG
GAATACGGCG AAGTCATTGG TGAAGCTGAA GAGGAATATG AAGAAGAAGA GTGGGCAAGA
AAAAGAATGA TCAAGTTGGT GGTCGATCGG GAGTATGAGA GCAGCTCACC TGGGGAAGAC
AGCGCTCCTG AGTCGCAGAG AAGCAGAACT CACAAGCCCA GTGGCCGCAG CAATGTCAAC
GGCAACATCT ACATTGCGCA GAATGGTTCC GTGGTGAGAA CACGCCGTGC CTGCGTCGCT
GATAACTTGA AGGTGCCCTC CCCTGGGTTG CTTGGGAGGC ATCTGAAGAA ATTAGACACA
TTGGCAGGGA CACGTGAAGA GAATGTGCCC CTGAACACAC TGTTCAAGGG GCCATTTTCC
ACAGAGAAAG CGAAAAGAAC CCCAACTCTG GTCACGTTTG CCCCGTGCCC CGTGGTGGCT
GAGCACTCGG CAGTGAAGCC ATCAGGGACC AGGCTGAAAC ACACAGCTGA GCAGGAGTCC
ATGGTAGACA GTAGGCTCTC CAGAGAGTCG ATGGAATTCC ACGGTGACAG CGCGCCATCA
GATGAGGAGG AGCTCTGGAT GGGTCCGTGG AACAGCCTCC ACATACCAAT GACAAAACTC
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu44161
Clone ID Related Accession (Same CDS sequence) XM_006513156
Accession Version XM_006513156.2 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5034bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 09-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform X7
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_039500.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced gi:568966531. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATGTATGAG
ATGCCCCAGT ATGGAAGTCG CCGTCGACTG CTGCCACCTG CTGGACAGGA GGAATACGGC
GAAGTCATTG GTGAAGCTGA AGAGGAATAT GAAGAAGAAG AGTGGGCAAG AAAAAGAATG
ATCAAGTTGG TGGTCGATCG GGAGTATGAG AGCAGCTCAC CTGGGGAAGA CAGCGCTCCT
GAGTCGCAGA GAAGCAGAAC TCACAAGCCC AGTGGCCGCA GCAATGTCAA CGGCAACATC
TACATTGCGC AGAATGGTTC CGTGGTGAGA ACACGCCGTG CCTGCGTCGC TGATAACTTG
AAGGTGCCCT CCCCTGGGTT GCTTGGGAGG CATCTGAAGA AATTAGACAC ATTGGCAGGG
ACACGTGAAG AGAATGTGCC CCTGAACACA CTGTTCAAGG GGCCATTTTC CACAGAGAAA
GCGAAAAGAA CCCCAACTCT GGTCACGTTT GCCCCGTGCC CCGTGGTGGC TGAGCACTCG
GCAGTGAAGC CATCAGGGAC CAGGCTGAAA CACACAGCTG AGCAGGAGTC CATGGTAGAC
AGTAGGCTCT CCAGAGAGTC GATGGAATTC CACGGTGACA GCGCGCCATC AGATGAGGAG
GAGCTCTGGA TGGGTCCGTG GAACAGCCTC CACATACCAA TGACAAAACT CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006513219.1
CDS340..5373
Misc Feature(1)805..1074(+)
Misc Feature(2)826..1023(+)
Misc Feature(3)1195..1521(+)
Misc Feature(4)1216..1521(+)
Misc Feature(5)1549..1869(+)
Misc Feature(6)1570..1866(+)
Misc Feature(7)1891..2181(+)
Misc Feature(8)1912..2181(+)
Misc Feature(9)2215..2493(+)
Misc Feature(10)2233..2490(+)
Misc Feature(11)2518..2799(+)
Misc Feature(12)2539..2796(+)
Misc Feature(13)2821..3117(+)
Misc Feature(14)2842..3117(+)
Misc Feature(15)3142..3435(+)
Misc Feature(16)3163..3345(+)
Misc Feature(17)3487..3774(+)
Misc Feature(18)3493..3771(+)
Misc Feature(19)3799..4083(+)
Misc Feature(20)3817..3993(+)
Translation

Target ORF information:

RefSeq Version XM_006513156
Organism Mus musculus (house mouse)
Definition PREDICTED: Mus musculus protocadherin 15 (Pcdh15), transcript variant X7, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_006513156

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAACG CCAGGCTGAG TGCACGAAGA CCGCAAGAAT TCAGTCTGCT
ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG
CCACCACCAC CACCAGGAGC ACATCTCTAT GAAGAACTGG GAGAGAGCGC AATGTATGAG
ATGCCCCAGT ATGGAAGTCG CCGTCGACTG CTGCCACCTG CTGGACAGGA GGAATACGGC
GAAGTCATTG GTGAAGCTGA AGAGGAATAT GAAGAAGAAG AGTGGGCAAG AAAAAGAATG
ATCAAGTTGG TGGTCGATCG GGAGTATGAG AGCAGCTCAC CTGGGGAAGA CAGCGCTCCT
GAGTCGCAGA GAAGCAGAAC TCACAAGCCC AGTGGCCGCA GCAATGTCAA CGGCAACATC
TACATTGCGC AGAATGGTTC CGTGGTGAGA ACACGCCGTG CCTGCGTCGC TGATAACTTG
AAGGTGCCCT CCCCTGGGTT GCTTGGGAGG CATCTGAAGA AATTAGACAC ATTGGCAGGG
ACACGTGAAG AGAATGTGCC CCTGAACACA CTGTTCAAGG GGCCATTTTC CACAGAGAAA
GCGAAAAGAA CCCCAACTCT GGTCACGTTT GCCCCGTGCC CCGTGGTGGC TGAGCACTCG
GCAGTGAAGC CATCAGGGAC CAGGCTGAAA CACACAGCTG AGCAGGAGTC CATGGTAGAC
AGTAGGCTCT CCAGAGAGTC GATGGAATTC CACGGTGACA GCGCGCCATC AGATGAGGAG
GAGCTCTGGA TGGGTCCGTG GAACAGCCTC CACATACCAA TGACAAAACT CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13166
Clone ID Related Accession (Same CDS sequence) NM_023115 , XM_006513143
Accession Version NM_023115.3 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5832bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-1 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, AF281899.1, AC121142.12 and AC153858.3. On Dec 19, 2008 this sequence version replaced gi:111074521. Transcript Variant: This variant (A) encodes isoform CD1-1, also known as protocadherin-15-CD1 isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF281899.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAATC TTTTCCTTCT CTACCATTTT GAACAAAGCA GGGGAAATAA CTCAGTCCCA
GAAGACAGGA GCAGTCATCG CGATGGGATG GCCTTTTCCT CCAGTACCAC TGAGTCTCAT
GAGCCAGCTC ATGTAGAGGG ACCACTTAAG GAGAGCCAGC CTAACCCAGC AAGGACGTTC
TCATTTGTTC CTGATGAGGA TAACTTAAGT ACCCATAATC CCCTTTACAT GGAAAGTATA
GGTCAAAGGT CAACAAACTC AGACCTTCAG CCACGAACAG ATTTTGAAGA GCTGTTGGCA
CCCAGAACAC AAGTTAAGAG TCAGTCTCTG AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG
TGGAATCAGT CTGTGAGCTT TCCTAGGCGG CTCATGTGGA AAGCCCCAAA CAGGCCAGAG
ACCATAGACC TGGTGGAGTG GCAGATCACC AATCAGAGAG CTGAATGCGA AAGCGCCAGA
TGCCACCCAA GCCAGAGAGG TAGCAGCAAC GTTCTGCTGG CAACTGAAGA TGCCCACGAG
TCAGAGAAAG AAGGGGGACA CAGAGACACC CTAATCGTCC AGCAAACAGA GCAGCTGAAA
TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC TCTTGGTCTC ACTTTTCTTT CTCAACTCTG
CCAACGATTT CCAGAGCGGT GGAACTCGGG TCGGAACCTA ATGTGGTCAC TTCTCCCGCT
GACTGCACCT TGGAACTTTC TCCTCCTCTG AGACCCCGTA TTTTAAACTC CTTAAGCTCT
AAGAGAGAGA CTCCCACATG TGCATCAGAT ACAGAACCAA AAAGGAACTC TTTTGAGATC
GCTCCCCATC CACCTAGCAT CTCTGCTCCC CTCCCACATC CGCCTCTTCC TAGACCTCCC
ATTGCCTTTA CCACTTTTCC TCTTCCCCTT TCTCCCCCTA ACCCTCCTCC CCCACAACTT
GTTACATTTT CTCTTCCCAT TTCTACACCC CCTACTTCTT CTCTACCTCT TCCTCCTCCA
CTGTCACTTC CTCCTCCTCC TCGGCCACCA GCTCCCCGCC TCTTCCCACA GCCTCCTTCC
ACGTCCATTC CATCCACAGA CAGCATCTCT GCACCAGCTG CTAAATGCAC TGCCAGTGCC
ACACACGCCA GAGAAACCAC GTCTACGACA CAGCCACCAG CATCCAACCC GCAGTGGGGG
GCAGAACCCC ACAGACATCC AAAAGGGATC CTCAGACATG TGAAAAACTT GGCAGAGCTC
GAGAAATCAG TGTCTAACAT GTACAGTCAC ATAGAAAAAA ACTGCCCACC TGCAGATCCC
TCAAAACTAC ACACGTTTTG CCCTGCAGAG AAAACAGGCA TGAAAATCAC ACATGACCAG
AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG GGAATTGACG TGCAACCTCA CAGTCAATCA
ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_075604.2
CDS422..6253
Misc Feature(1)413..415(+)
Misc Feature(2)887..1156(+)
Misc Feature(3)908..1105(+)
Misc Feature(4)1277..1603(+)
Misc Feature(5)1298..1603(+)
Misc Feature(6)1631..1951(+)
Misc Feature(7)1652..1948(+)
Misc Feature(8)1973..2263(+)
Misc Feature(9)1994..2263(+)
Misc Feature(10)2297..2575(+)
Misc Feature(11)2315..2572(+)
Misc Feature(12)2600..2881(+)
Misc Feature(13)2621..2878(+)
Misc Feature(14)2903..3199(+)
Misc Feature(15)2924..3199(+)
Misc Feature(16)3224..3517(+)
Misc Feature(17)3245..3427(+)
Misc Feature(18)3569..3856(+)
Misc Feature(19)3575..3853(+)
Misc Feature(20)3881..4165(+)
Misc Feature(21)3899..4075(+)
Misc Feature(22)4565..4627(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..527
Gene:Pcdh15
Gene Synonym:
Exon (4)528..593
Gene:Pcdh15
Gene Synonym:
Exon (5)594..754
Gene:Pcdh15
Gene Synonym:
Exon (6)755..910
Gene:Pcdh15
Gene Synonym:
Exon (7)911..1030
Gene:Pcdh15
Gene Synonym:
Exon (8)1031..1141
Gene:Pcdh15
Gene Synonym:
Exon (9)1142..1312
Gene:Pcdh15
Gene Synonym:
Exon (10)1313..1421
Gene:Pcdh15
Gene Synonym:
Exon (11)1422..1534
Gene:Pcdh15
Gene Synonym:
Exon (12)1535..1741
Gene:Pcdh15
Gene Synonym:
Exon (13)1742..1876
Gene:Pcdh15
Gene Synonym:
Exon (14)1877..2026
Gene:Pcdh15
Gene Synonym:
Exon (15)2027..2220
Gene:Pcdh15
Gene Synonym:
Exon (16)2221..2353
Gene:Pcdh15
Gene Synonym:
Exon (17)2354..2433
Gene:Pcdh15
Gene Synonym:
Exon (18)2434..2527
Gene:Pcdh15
Gene Synonym:
Exon (19)2528..2656
Gene:Pcdh15
Gene Synonym:
Exon (20)2657..2962
Gene:Pcdh15
Gene Synonym:
Exon (21)2963..3187
Gene:Pcdh15
Gene Synonym:
Exon (22)3188..3304
Gene:Pcdh15
Gene Synonym:
Exon (23)3305..3445
Gene:Pcdh15
Gene Synonym:
Exon (24)3446..3558
Gene:Pcdh15
Gene Synonym:
Exon (25)3559..3668
Gene:Pcdh15
Gene Synonym:
Exon (26)3669..3809
Gene:Pcdh15
Gene Synonym:
Exon (27)3810..3937
Gene:Pcdh15
Gene Synonym:
Exon (28)3938..4153
Gene:Pcdh15
Gene Synonym:
Exon (29)4154..4242
Gene:Pcdh15
Gene Synonym:
Exon (30)4243..4419
Gene:Pcdh15
Gene Synonym:
Exon (31)4420..4638
Gene:Pcdh15
Gene Synonym:
Exon (32)4639..4647
Gene:Pcdh15
Gene Synonym:
Exon (33)4648..4803
Gene:Pcdh15
Gene Synonym:
Exon (34)4804..4809
Gene:Pcdh15
Gene Synonym:
Exon (35)4810..9064
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_023115
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant A, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_023115

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAATC TTTTCCTTCT CTACCATTTT GAACAAAGCA GGGGAAATAA CTCAGTCCCA
GAAGACAGGA GCAGTCATCG CGATGGGATG GCCTTTTCCT CCAGTACCAC TGAGTCTCAT
GAGCCAGCTC ATGTAGAGGG ACCACTTAAG GAGAGCCAGC CTAACCCAGC AAGGACGTTC
TCATTTGTTC CTGATGAGGA TAACTTAAGT ACCCATAATC CCCTTTACAT GGAAAGTATA
GGTCAAAGGT CAACAAACTC AGACCTTCAG CCACGAACAG ATTTTGAAGA GCTGTTGGCA
CCCAGAACAC AAGTTAAGAG TCAGTCTCTG AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG
TGGAATCAGT CTGTGAGCTT TCCTAGGCGG CTCATGTGGA AAGCCCCAAA CAGGCCAGAG
ACCATAGACC TGGTGGAGTG GCAGATCACC AATCAGAGAG CTGAATGCGA AAGCGCCAGA
TGCCACCCAA GCCAGAGAGG TAGCAGCAAC GTTCTGCTGG CAACTGAAGA TGCCCACGAG
TCAGAGAAAG AAGGGGGACA CAGAGACACC CTAATCGTCC AGCAAACAGA GCAGCTGAAA
TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC TCTTGGTCTC ACTTTTCTTT CTCAACTCTG
CCAACGATTT CCAGAGCGGT GGAACTCGGG TCGGAACCTA ATGTGGTCAC TTCTCCCGCT
GACTGCACCT TGGAACTTTC TCCTCCTCTG AGACCCCGTA TTTTAAACTC CTTAAGCTCT
AAGAGAGAGA CTCCCACATG TGCATCAGAT ACAGAACCAA AAAGGAACTC TTTTGAGATC
GCTCCCCATC CACCTAGCAT CTCTGCTCCC CTCCCACATC CGCCTCTTCC TAGACCTCCC
ATTGCCTTTA CCACTTTTCC TCTTCCCCTT TCTCCCCCTA ACCCTCCTCC CCCACAACTT
GTTACATTTT CTCTTCCCAT TTCTACACCC CCTACTTCTT CTCTACCTCT TCCTCCTCCA
CTGTCACTTC CTCCTCCTCC TCGGCCACCA GCTCCCCGCC TCTTCCCACA GCCTCCTTCC
ACGTCCATTC CATCCACAGA CAGCATCTCT GCACCAGCTG CTAAATGCAC TGCCAGTGCC
ACACACGCCA GAGAAACCAC GTCTACGACA CAGCCACCAG CATCCAACCC GCAGTGGGGG
GCAGAACCCC ACAGACATCC AAAAGGGATC CTCAGACATG TGAAAAACTT GGCAGAGCTC
GAGAAATCAG TGTCTAACAT GTACAGTCAC ATAGAAAAAA ACTGCCCACC TGCAGATCCC
TCAAAACTAC ACACGTTTTG CCCTGCAGAG AAAACAGGCA TGAAAATCAC ACATGACCAG
AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG GGAATTGACG TGCAACCTCA CAGTCAATCA
ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13229
Clone ID Related Accession (Same CDS sequence) NM_001142735
Accession Version NM_001142735.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5817bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-2 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354396.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (B) lacks an alternate in-frame exon in the 5' coding region, compared to variant A. The resulting isoform (CD1-2), also known as protocadherin-15-CD1 isoform 2, lacks a 5-aa segment near the N-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354396.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAATCTTTTC
CTTCTCTACC ATTTTGAACA AAGCAGGGGA AATAACTCAG TCCCAGAAGA CAGGAGCAGT
CATCGCGATG GGATGGCCTT TTCCTCCAGT ACCACTGAGT CTCATGAGCC AGCTCATGTA
GAGGGACCAC TTAAGGAGAG CCAGCCTAAC CCAGCAAGGA CGTTCTCATT TGTTCCTGAT
GAGGATAACT TAAGTACCCA TAATCCCCTT TACATGGAAA GTATAGGTCA AAGGTCAACA
AACTCAGACC TTCAGCCACG AACAGATTTT GAAGAGCTGT TGGCACCCAG AACACAAGTT
AAGAGTCAGT CTCTGAGGGG CCCAAGAGAA AAGATCCAGA GGGTGTGGAA TCAGTCTGTG
AGCTTTCCTA GGCGGCTCAT GTGGAAAGCC CCAAACAGGC CAGAGACCAT AGACCTGGTG
GAGTGGCAGA TCACCAATCA GAGAGCTGAA TGCGAAAGCG CCAGATGCCA CCCAAGCCAG
AGAGGTAGCA GCAACGTTCT GCTGGCAACT GAAGATGCCC ACGAGTCAGA GAAAGAAGGG
GGACACAGAG ACACCCTAAT CGTCCAGCAA ACAGAGCAGC TGAAATCTCT GTCTTCTGGC
TCTTCTTTTT CCTCCTCTTG GTCTCACTTT TCTTTCTCAA CTCTGCCAAC GATTTCCAGA
GCGGTGGAAC TCGGGTCGGA ACCTAATGTG GTCACTTCTC CCGCTGACTG CACCTTGGAA
CTTTCTCCTC CTCTGAGACC CCGTATTTTA AACTCCTTAA GCTCTAAGAG AGAGACTCCC
ACATGTGCAT CAGATACAGA ACCAAAAAGG AACTCTTTTG AGATCGCTCC CCATCCACCT
AGCATCTCTG CTCCCCTCCC ACATCCGCCT CTTCCTAGAC CTCCCATTGC CTTTACCACT
TTTCCTCTTC CCCTTTCTCC CCCTAACCCT CCTCCCCCAC AACTTGTTAC ATTTTCTCTT
CCCATTTCTA CACCCCCTAC TTCTTCTCTA CCTCTTCCTC CTCCACTGTC ACTTCCTCCT
CCTCCTCGGC CACCAGCTCC CCGCCTCTTC CCACAGCCTC CTTCCACGTC CATTCCATCC
ACAGACAGCA TCTCTGCACC AGCTGCTAAA TGCACTGCCA GTGCCACACA CGCCAGAGAA
ACCACGTCTA CGACACAGCC ACCAGCATCC AACCCGCAGT GGGGGGCAGA ACCCCACAGA
CATCCAAAAG GGATCCTCAG ACATGTGAAA AACTTGGCAG AGCTCGAGAA ATCAGTGTCT
AACATGTACA GTCACATAGA AAAAAACTGC CCACCTGCAG ATCCCTCAAA ACTACACACG
TTTTGCCCTG CAGAGAAAAC AGGCATGAAA ATCACACATG ACCAGAGCCA GGAAACGTTG
GTTAGAGTTG TTGAGGGAAT TGACGTGCAA CCTCACAGTC AATCAACATC TTTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136207.1
CDS422..6238
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..3841(+)
Misc Feature(19)3560..3838(+)
Misc Feature(20)3866..4150(+)
Misc Feature(21)3884..4060(+)
Misc Feature(22)4550..4612(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..3922
Gene:Pcdh15
Gene Synonym:
Exon (27)3923..4138
Gene:Pcdh15
Gene Synonym:
Exon (28)4139..4227
Gene:Pcdh15
Gene Synonym:
Exon (29)4228..4404
Gene:Pcdh15
Gene Synonym:
Exon (30)4405..4623
Gene:Pcdh15
Gene Synonym:
Exon (31)4624..4632
Gene:Pcdh15
Gene Synonym:
Exon (32)4633..4788
Gene:Pcdh15
Gene Synonym:
Exon (33)4789..4794
Gene:Pcdh15
Gene Synonym:
Exon (34)4795..9049
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142735
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant B, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142735

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAATCTTTTC
CTTCTCTACC ATTTTGAACA AAGCAGGGGA AATAACTCAG TCCCAGAAGA CAGGAGCAGT
CATCGCGATG GGATGGCCTT TTCCTCCAGT ACCACTGAGT CTCATGAGCC AGCTCATGTA
GAGGGACCAC TTAAGGAGAG CCAGCCTAAC CCAGCAAGGA CGTTCTCATT TGTTCCTGAT
GAGGATAACT TAAGTACCCA TAATCCCCTT TACATGGAAA GTATAGGTCA AAGGTCAACA
AACTCAGACC TTCAGCCACG AACAGATTTT GAAGAGCTGT TGGCACCCAG AACACAAGTT
AAGAGTCAGT CTCTGAGGGG CCCAAGAGAA AAGATCCAGA GGGTGTGGAA TCAGTCTGTG
AGCTTTCCTA GGCGGCTCAT GTGGAAAGCC CCAAACAGGC CAGAGACCAT AGACCTGGTG
GAGTGGCAGA TCACCAATCA GAGAGCTGAA TGCGAAAGCG CCAGATGCCA CCCAAGCCAG
AGAGGTAGCA GCAACGTTCT GCTGGCAACT GAAGATGCCC ACGAGTCAGA GAAAGAAGGG
GGACACAGAG ACACCCTAAT CGTCCAGCAA ACAGAGCAGC TGAAATCTCT GTCTTCTGGC
TCTTCTTTTT CCTCCTCTTG GTCTCACTTT TCTTTCTCAA CTCTGCCAAC GATTTCCAGA
GCGGTGGAAC TCGGGTCGGA ACCTAATGTG GTCACTTCTC CCGCTGACTG CACCTTGGAA
CTTTCTCCTC CTCTGAGACC CCGTATTTTA AACTCCTTAA GCTCTAAGAG AGAGACTCCC
ACATGTGCAT CAGATACAGA ACCAAAAAGG AACTCTTTTG AGATCGCTCC CCATCCACCT
AGCATCTCTG CTCCCCTCCC ACATCCGCCT CTTCCTAGAC CTCCCATTGC CTTTACCACT
TTTCCTCTTC CCCTTTCTCC CCCTAACCCT CCTCCCCCAC AACTTGTTAC ATTTTCTCTT
CCCATTTCTA CACCCCCTAC TTCTTCTCTA CCTCTTCCTC CTCCACTGTC ACTTCCTCCT
CCTCCTCGGC CACCAGCTCC CCGCCTCTTC CCACAGCCTC CTTCCACGTC CATTCCATCC
ACAGACAGCA TCTCTGCACC AGCTGCTAAA TGCACTGCCA GTGCCACACA CGCCAGAGAA
ACCACGTCTA CGACACAGCC ACCAGCATCC AACCCGCAGT GGGGGGCAGA ACCCCACAGA
CATCCAAAAG GGATCCTCAG ACATGTGAAA AACTTGGCAG AGCTCGAGAA ATCAGTGTCT
AACATGTACA GTCACATAGA AAAAAACTGC CCACCTGCAG ATCCCTCAAA ACTACACACG
TTTTGCCCTG CAGAGAAAAC AGGCATGAAA ATCACACATG ACCAGAGCCA GGAAACGTTG
GTTAGAGTTG TTGAGGGAAT TGACGTGCAA CCTCACAGTC AATCAACATC TTTGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13182
Clone ID Related Accession (Same CDS sequence) NM_001142736
Accession Version NM_001142736.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5811bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-4 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354398.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (C) lacks two alternate in-frame exons in the 5' and 3' coding region, compared to variant A. The resulting isoform (CD1-4), also known as protocadherin-15-CD1 isoform 4, lacks a 5-aa segment near the N-terminus and a 2-aa segment near the C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354398.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164136, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATTCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136208.1
CDS422..6232
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..3841(+)
Misc Feature(19)3560..3838(+)
Misc Feature(20)3866..4150(+)
Misc Feature(21)3884..4060(+)
Misc Feature(22)4550..4612(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..3922
Gene:Pcdh15
Gene Synonym:
Exon (27)3923..4138
Gene:Pcdh15
Gene Synonym:
Exon (28)4139..4227
Gene:Pcdh15
Gene Synonym:
Exon (29)4228..4404
Gene:Pcdh15
Gene Synonym:
Exon (30)4405..4623
Gene:Pcdh15
Gene Synonym:
Exon (31)4624..4632
Gene:Pcdh15
Gene Synonym:
Exon (32)4633..4788
Gene:Pcdh15
Gene Synonym:
Exon (33)4789..9043
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142736
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant C, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142736

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATTCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13215
Clone ID Related Accession (Same CDS sequence) NM_001142737
Accession Version NM_001142737.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5604bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-6 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354400.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (D) lacks an alternate in-frame exon in the 5' coding region and two alternate in-frame exons in the central coding region, compared to variant A. The resulting isoform (CD1-6), also known as protocadherin-15-CD1 isoform 6, lacks a 5-aa segment near the N-terminus and a 71-aa segment in the central protein, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354400.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGCACAGG GATTCTCAGC
CTAGGGAAGG CTCTAGACCG CGAGAGCACA GACCGCTACA TCCTCATCGT CACAGCCTCA
GATGGCAGAC CGGATGGAAC CTCAACTGCC ACTGTGAACA TAGTGGTGAC GGACGTCAAT
GACAACGCTC CCGTGTTCGA TCCCTATCTG CCCAGGAACC TCTCTGTGGT GGAGGAAGAA
GCCAATGCCT TTGTGGGTCA AGTCCGGGCA ACAGACCCAG ATGCTGGGAT AAACGGCCAA
GTTCACTACA GCCTGGGGAA CTTCAACAAC CTCTTCCGCA TCACATCCAA CGGGAGCATT
TACACAGCCG TGAAGCTGAA CAGGGAAGCC AGGGACCACT ATGAACTGGT TGTCGTGGCA
ACAGATGGAG CAGTCCACCC TCGACATTCA ACTCTGACAC TGTACATCAA GGTGTTGGAC
ATTGATGATA ACAGTCCTGT TTTTACCAAT TCAACGTACA CAGTTGTCGT TGAAGAGAAT
CTGCCAGCCG GGACCTCCTT TCTTCAAATA GAGGCCAAGG ATGTTGACCT TGGAGCCAAT
GTGTCATATC GGATCAGAAG CCCAGAAGTG AAACACCTTT TTGCACTGCA TCCATTCACT
GGAGAATTGT CTCTTCTGAG GAGTTTGGAT TATGAGGCCT TTCCGGACCA GGAGGCAAGC
ATCACATTCT TGGTGGAGGC CTTTGACATT TATGGGACTA TGCCACCTGG TATAGCAACA
GTCACGGTAA TTGTGAAGGA CATGAATGAC TACCCTCCAG TGTTTAGCAA ACGCATCTAC
AAGGGGATGG TGGCTCCAGA TGCAGTCAAG GGGACACCAA TCACCACCGT TTATGCTGAA
GATGCGGACC CACCTGGGAT GCCTGCAAGT AGGGTGAGGT ATCGAGTGGA CGACGTGCAG
TTTCCATACC CAGCCAGTAT TTTTGATGTA GAGGAAGATT CTGGAAGAGT AGTAACCCGC
GTCAATCTTA ATGAAGAGCC TACTACGATT TTCAAGCTGG TGGTTGTGGC TTTTGATGAC
GGCGAACCTG TGATGTCCAG CAGTGCCACG GTGAGAATTC TTGTCTTACA TCCTGGAGAG
ATCCCACGCT TCACCCAAGA GGAATACAGA CCTCCTCCTG TAAGTGAGCT TGCGGCCAGA
GGGACTGTAG TTGGTGTCAT TTCTGCTGCT GCCATTAATC AGAGCATCGT GTACTCCATT
GTGGCAGGAA ATGAGGAAGA CAAGTTTGGA ATCAACAATG TCACTGGGGT CATCTATGTG
AATTCACCAT TGGATTACGA GACAAGGACC AGCTATGTGC TCCGGGTACA AGCAGATTCT
CTGGAAGTGG TCCTTGCCAA TCTCCGAGTC CCTTCAAAAA GCAATACAGC TAAGGTGTAC
ATTGAGATTC AGGATGAAAA CGATCACCCC CCAGTGTTCC AGAAGAAATT CTACATTGGA
GGTGTGTCTG AAGACGCAAG GATGTTCGCA TCTGTGCTCA GAGTGAAGGC CACCGACAGG
GACACGGGTA ATTACAGTGC CATGGCCTAC CGGCTCATCA TACCGCCGAT TAAAGAGGGC
AAAGAGGGGT TTGTGGTGGA AACATACACA GGTCTCATCA AGACAGCCAT GCTCTTCCAC
AATATGAGAA GATCCTACTT CAAGTTTCAA GTGATTGCAA CTGACGACTA CGGGAAGGGG
TTGAGCGGGA AAGCAGACGT ACTGGTCTCC GTGGTCAATC AACTGGATAT GCAGGTCATT
GTCTCCAATG TGCCCCCTAC ACTAGTGGAA AAGAAGATAG AAGACCTTAC AGAGATTTTG
GATCGCTACG TTCAGGAGCA AATTCCTGGT GCCAAGGTTG TGGTGGAGTC CATAGGTGCC
CGTCGCCATG GAGACGCCTA CTCCCTAGAA GACTATAGCA AGTGCGACCT GACTGTCTAT
GCCATCGACC CGCAGACCAA CAGAGCCATC GACAGAAATG AGCTTTTTAA GTTCCTGGAC
GGCAAACTGC TCGATATCAA TAAAGACTTC CAGCCGTATT ACGGGGAAGG AGGGCGCATT
CTGGAGATTC GGACACCTGA GGCAGTGACG AGCATCAAGA AGCGAGGAGA AAGCTTGGGG
TACACAGAAG GGGCCTTGCT GGCCTTGGCC TTCATCATCA TCCTCTGTTG CATCCCAGCC
ATCTTGGTCG TCTTAGTAAG CTACCGACAG TTTAAAGTAC GCCAGGCTGA GTGCACGAAG
ACCGCAAGAA TTCAGTCTGC TATGCCTGCA GCCAAGCCTG CAGCTCCTGT ACCAGCTGCG
CCTGCGCCGC CCCCGCCCCC GCCACCACCA CCACCAGGAG CACATCTCTA TGAAGAACTG
GGAGAGAGCG CAATGCATAA TCTTTTCCTT CTCTACCATT TTGAACAAAG CAGGGGAAAT
AACTCAGTCC CAGAAGACAG GAGCAGTCAT CGCGATGGGA TGGCCTTTTC CTCCAGTACC
ACTGAGTCTC ATGAGCCAGC TCATGTAGAG GGACCACTTA AGGAGAGCCA GCCTAACCCA
GCAAGGACGT TCTCATTTGT TCCTGATGAG GATAACTTAA GTACCCATAA TCCCCTTTAC
ATGGAAAGTA TAGGTCAAAG GTCAACAAAC TCAGACCTTC AGCCACGAAC AGATTTTGAA
GAGCTGTTGG CACCCAGAAC ACAAGTTAAG AGTCAGTCTC TGAGGGGCCC AAGAGAAAAG
ATCCAGAGGG TGTGGAATCA GTCTGTGAGC TTTCCTAGGC GGCTCATGTG GAAAGCCCCA
AACAGGCCAG AGACCATAGA CCTGGTGGAG TGGCAGATCA CCAATCAGAG AGCTGAATGC
GAAAGCGCCA GATGCCACCC AAGCCAGAGA GGTAGCAGCA ACGTTCTGCT GGCAACTGAA
GATGCCCACG AGTCAGAGAA AGAAGGGGGA CACAGAGACA CCCTAATCGT CCAGCAAACA
GAGCAGCTGA AATCTCTGTC TTCTGGCTCT TCTTTTTCCT CCTCTTGGTC TCACTTTTCT
TTCTCAACTC TGCCAACGAT TTCCAGAGCG GTGGAACTCG GGTCGGAACC TAATGTGGTC
ACTTCTCCCG CTGACTGCAC CTTGGAACTT TCTCCTCCTC TGAGACCCCG TATTTTAAAC
TCCTTAAGCT CTAAGAGAGA GACTCCCACA TGTGCATCAG ATACAGAACC AAAAAGGAAC
TCTTTTGAGA TCGCTCCCCA TCCACCTAGC ATCTCTGCTC CCCTCCCACA TCCGCCTCTT
CCTAGACCTC CCATTGCCTT TACCACTTTT CCTCTTCCCC TTTCTCCCCC TAACCCTCCT
CCCCCACAAC TTGTTACATT TTCTCTTCCC ATTTCTACAC CCCCTACTTC TTCTCTACCT
CTTCCTCCTC CACTGTCACT TCCTCCTCCT CCTCGGCCAC CAGCTCCCCG CCTCTTCCCA
CAGCCTCCTT CCACGTCCAT TCCATCCACA GACAGCATCT CTGCACCAGC TGCTAAATGC
ACTGCCAGTG CCACACACGC CAGAGAAACC ACGTCTACGA CACAGCCACC AGCATCCAAC
CCGCAGTGGG GGGCAGAACC CCACAGACAT CCAAAAGGGA TCCTCAGACA TGTGAAAAAC
TTGGCAGAGC TCGAGAAATC AGTGTCTAAC ATGTACAGTC ACATAGAAAA AAACTGCCCA
CCTGCAGATC CCTCAAAACT ACACACGTTT TGCCCTGCAG AGAAAACAGG CATGAAAATC
ACACATGACC AGAGCCAGGA AACGTTGGTT AGAGTTGTTG AGGGAATTGA CGTGCAACCT
CACAGTCAAT CAACATCTTT GTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136209.1
CDS422..6025
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2347(+)
Misc Feature(9)1979..2344(+)
Misc Feature(10)2372..2653(+)
Misc Feature(11)2393..2650(+)
Misc Feature(12)2675..2971(+)
Misc Feature(13)2696..2971(+)
Misc Feature(14)2996..3289(+)
Misc Feature(15)3017..3199(+)
Misc Feature(16)3341..3628(+)
Misc Feature(17)3347..3625(+)
Misc Feature(18)3653..3937(+)
Misc Feature(19)3671..3847(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2299
Gene:Pcdh15
Gene Synonym:
Exon (16)2300..2428
Gene:Pcdh15
Gene Synonym:
Exon (17)2429..2734
Gene:Pcdh15
Gene Synonym:
Exon (18)2735..2959
Gene:Pcdh15
Gene Synonym:
Exon (19)2960..3076
Gene:Pcdh15
Gene Synonym:
Exon (20)3077..3217
Gene:Pcdh15
Gene Synonym:
Exon (21)3218..3330
Gene:Pcdh15
Gene Synonym:
Exon (22)3331..3440
Gene:Pcdh15
Gene Synonym:
Exon (23)3441..3581
Gene:Pcdh15
Gene Synonym:
Exon (24)3582..3709
Gene:Pcdh15
Gene Synonym:
Exon (25)3710..3925
Gene:Pcdh15
Gene Synonym:
Exon (26)3926..4014
Gene:Pcdh15
Gene Synonym:
Exon (27)4015..4191
Gene:Pcdh15
Gene Synonym:
Exon (28)4192..4410
Gene:Pcdh15
Gene Synonym:
Exon (29)4411..4419
Gene:Pcdh15
Gene Synonym:
Exon (30)4420..4575
Gene:Pcdh15
Gene Synonym:
Exon (31)4576..4581
Gene:Pcdh15
Gene Synonym:
Exon (32)4582..8836
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142737
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant D, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142737

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGCACAGG GATTCTCAGC
CTAGGGAAGG CTCTAGACCG CGAGAGCACA GACCGCTACA TCCTCATCGT CACAGCCTCA
GATGGCAGAC CGGATGGAAC CTCAACTGCC ACTGTGAACA TAGTGGTGAC GGACGTCAAT
GACAACGCTC CCGTGTTCGA TCCCTATCTG CCCAGGAACC TCTCTGTGGT GGAGGAAGAA
GCCAATGCCT TTGTGGGTCA AGTCCGGGCA ACAGACCCAG ATGCTGGGAT AAACGGCCAA
GTTCACTACA GCCTGGGGAA CTTCAACAAC CTCTTCCGCA TCACATCCAA CGGGAGCATT
TACACAGCCG TGAAGCTGAA CAGGGAAGCC AGGGACCACT ATGAACTGGT TGTCGTGGCA
ACAGATGGAG CAGTCCACCC TCGACATTCA ACTCTGACAC TGTACATCAA GGTGTTGGAC
ATTGATGATA ACAGTCCTGT TTTTACCAAT TCAACGTACA CAGTTGTCGT TGAAGAGAAT
CTGCCAGCCG GGACCTCCTT TCTTCAAATA GAGGCCAAGG ATGTTGACCT TGGAGCCAAT
GTGTCATATC GGATCAGAAG CCCAGAAGTG AAACACCTTT TTGCACTGCA TCCATTCACT
GGAGAATTGT CTCTTCTGAG GAGTTTGGAT TATGAGGCCT TTCCGGACCA GGAGGCAAGC
ATCACATTCT TGGTGGAGGC CTTTGACATT TATGGGACTA TGCCACCTGG TATAGCAACA
GTCACGGTAA TTGTGAAGGA CATGAATGAC TACCCTCCAG TGTTTAGCAA ACGCATCTAC
AAGGGGATGG TGGCTCCAGA TGCAGTCAAG GGGACACCAA TCACCACCGT TTATGCTGAA
GATGCGGACC CACCTGGGAT GCCTGCAAGT AGGGTGAGGT ATCGAGTGGA CGACGTGCAG
TTTCCATACC CAGCCAGTAT TTTTGATGTA GAGGAAGATT CTGGAAGAGT AGTAACCCGC
GTCAATCTTA ATGAAGAGCC TACTACGATT TTCAAGCTGG TGGTTGTGGC TTTTGATGAC
GGCGAACCTG TGATGTCCAG CAGTGCCACG GTGAGAATTC TTGTCTTACA TCCTGGAGAG
ATCCCACGCT TCACCCAAGA GGAATACAGA CCTCCTCCTG TAAGTGAGCT TGCGGCCAGA
GGGACTGTAG TTGGTGTCAT TTCTGCTGCT GCCATTAATC AGAGCATCGT GTACTCCATT
GTGGCAGGAA ATGAGGAAGA CAAGTTTGGA ATCAACAATG TCACTGGGGT CATCTATGTG
AATTCACCAT TGGATTACGA GACAAGGACC AGCTATGTGC TCCGGGTACA AGCAGATTCT
CTGGAAGTGG TCCTTGCCAA TCTCCGAGTC CCTTCAAAAA GCAATACAGC TAAGGTGTAC
ATTGAGATTC AGGATGAAAA CGATCACCCC CCAGTGTTCC AGAAGAAATT CTACATTGGA
GGTGTGTCTG AAGACGCAAG GATGTTCGCA TCTGTGCTCA GAGTGAAGGC CACCGACAGG
GACACGGGTA ATTACAGTGC CATGGCCTAC CGGCTCATCA TACCGCCGAT TAAAGAGGGC
AAAGAGGGGT TTGTGGTGGA AACATACACA GGTCTCATCA AGACAGCCAT GCTCTTCCAC
AATATGAGAA GATCCTACTT CAAGTTTCAA GTGATTGCAA CTGACGACTA CGGGAAGGGG
TTGAGCGGGA AAGCAGACGT ACTGGTCTCC GTGGTCAATC AACTGGATAT GCAGGTCATT
GTCTCCAATG TGCCCCCTAC ACTAGTGGAA AAGAAGATAG AAGACCTTAC AGAGATTTTG
GATCGCTACG TTCAGGAGCA AATTCCTGGT GCCAAGGTTG TGGTGGAGTC CATAGGTGCC
CGTCGCCATG GAGACGCCTA CTCCCTAGAA GACTATAGCA AGTGCGACCT GACTGTCTAT
GCCATCGACC CGCAGACCAA CAGAGCCATC GACAGAAATG AGCTTTTTAA GTTCCTGGAC
GGCAAACTGC TCGATATCAA TAAAGACTTC CAGCCGTATT ACGGGGAAGG AGGGCGCATT
CTGGAGATTC GGACACCTGA GGCAGTGACG AGCATCAAGA AGCGAGGAGA AAGCTTGGGG
TACACAGAAG GGGCCTTGCT GGCCTTGGCC TTCATCATCA TCCTCTGTTG CATCCCAGCC
ATCTTGGTCG TCTTAGTAAG CTACCGACAG TTTAAAGTAC GCCAGGCTGA GTGCACGAAG
ACCGCAAGAA TTCAGTCTGC TATGCCTGCA GCCAAGCCTG CAGCTCCTGT ACCAGCTGCG
CCTGCGCCGC CCCCGCCCCC GCCACCACCA CCACCAGGAG CACATCTCTA TGAAGAACTG
GGAGAGAGCG CAATGCATAA TCTTTTCCTT CTCTACCATT TTGAACAAAG CAGGGGAAAT
AACTCAGTCC CAGAAGACAG GAGCAGTCAT CGCGATGGGA TGGCCTTTTC CTCCAGTACC
ACTGAGTCTC ATGAGCCAGC TCATGTAGAG GGACCACTTA AGGAGAGCCA GCCTAACCCA
GCAAGGACGT TCTCATTTGT TCCTGATGAG GATAACTTAA GTACCCATAA TCCCCTTTAC
ATGGAAAGTA TAGGTCAAAG GTCAACAAAC TCAGACCTTC AGCCACGAAC AGATTTTGAA
GAGCTGTTGG CACCCAGAAC ACAAGTTAAG AGTCAGTCTC TGAGGGGCCC AAGAGAAAAG
ATCCAGAGGG TGTGGAATCA GTCTGTGAGC TTTCCTAGGC GGCTCATGTG GAAAGCCCCA
AACAGGCCAG AGACCATAGA CCTGGTGGAG TGGCAGATCA CCAATCAGAG AGCTGAATGC
GAAAGCGCCA GATGCCACCC AAGCCAGAGA GGTAGCAGCA ACGTTCTGCT GGCAACTGAA
GATGCCCACG AGTCAGAGAA AGAAGGGGGA CACAGAGACA CCCTAATCGT CCAGCAAACA
GAGCAGCTGA AATCTCTGTC TTCTGGCTCT TCTTTTTCCT CCTCTTGGTC TCACTTTTCT
TTCTCAACTC TGCCAACGAT TTCCAGAGCG GTGGAACTCG GGTCGGAACC TAATGTGGTC
ACTTCTCCCG CTGACTGCAC CTTGGAACTT TCTCCTCCTC TGAGACCCCG TATTTTAAAC
TCCTTAAGCT CTAAGAGAGA GACTCCCACA TGTGCATCAG ATACAGAACC AAAAAGGAAC
TCTTTTGAGA TCGCTCCCCA TCCACCTAGC ATCTCTGCTC CCCTCCCACA TCCGCCTCTT
CCTAGACCTC CCATTGCCTT TACCACTTTT CCTCTTCCCC TTTCTCCCCC TAACCCTCCT
CCCCCACAAC TTGTTACATT TTCTCTTCCC ATTTCTACAC CCCCTACTTC TTCTCTACCT
CTTCCTCCTC CACTGTCACT TCCTCCTCCT CCTCGGCCAC CAGCTCCCCG CCTCTTCCCA
CAGCCTCCTT CCACGTCCAT TCCATCCACA GACAGCATCT CTGCACCAGC TGCTAAATGC
ACTGCCAGTG CCACACACGC CAGAGAAACC ACGTCTACGA CACAGCCACC AGCATCCAAC
CCGCAGTGGG GGGCAGAACC CCACAGACAT CCAAAAGGGA TCCTCAGACA TGTGAAAAAC
TTGGCAGAGC TCGAGAAATC AGTGTCTAAC ATGTACAGTC ACATAGAAAA AAACTGCCCA
CCTGCAGATC CCTCAAAACT ACACACGTTT TGCCCTGCAG AGAAAACAGG CATGAAAATC
ACACATGACC AGAGCCAGGA AACGTTGGTT AGAGTTGTTG AGGGAATTGA CGTGCAACCT
CACAGTCAAT CAACATCTTT GTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13179
Clone ID Related Accession (Same CDS sequence) NM_001142738
Accession Version NM_001142738.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5691bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-8 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354401.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (F) lacks 4 alternate in-frame exons, compared to variant A. The resulting isoform (CD1-8), also known as protocadherin-15-CD1 isoform 8, has the same N- and C-termini but lacks four internal segments, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354401.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGGACCGT
GCACAAAATC TGAATGAGAG GCGAACAACC ACCACCACCC TCACAGTAGA TGTTCTAGAT
GGAGATGACC TGGGACCTAT GTTTCTGCCT TGTGTTCTTG TGCCAAACAC ACGTGACTGT
CGTCCACTCA CCTACCAAGC TGCCATTCCT GAACTGAGGA CTCCGGAAGA ACTGAACCCT
ATTTTGGTGA CACCACCTAT CCAAGCCATT GATCAGGACC GAAACATCCA ACCACCATCT
GATCGACCTG GCATCCTCTA CTCCATCCTT GTCGGCACCC CTGAGGATTA CCCCCGCTTC
TTCCATATGC ATCCCAGGAC TGCAGAACTC ACTCTCCTGG AGCCAGTAAA CAGAGACTTC
CATCAAAAAT TTGATTTGGT TATTAAGGCT GAGCAGGACA ATGGCCACCC ACTTCCTGCC
TTTGCTAGTC TGCACATCGA AATACTAGAC GAAAACAATC AGAGTCCATA CTTCACAATG
CCCAGCTATC AAGGATACAT CCTGGAATCC GCCCCAGTGG GAGCCACCAT TTCTGAGAGC
CTAAACTTAA CCACTCCTCT GAGAATTGTA GCTCTGGACA AAGACATAGA AGACACAAAA
GATCCAGAGC TCCACCTCTT CCTGAATGAC TACACCTCGG TCTTCACTGT GACACCCACT
GGTATCACCC GCTACCTCAC CCTGCTTCAA CCTGTGGACA GGGAGGAACA GCAAACCTAC
ACCTTTCTGA TAACAGCGTT TGATGGCGTG CAAGAAAGTG AGCCAGTCGT GGTCAATATC
CGAGTGATGG ATGCAAATGA TAACACGCCC ACCTTCCCTG AAATCTCCTA TGATGTCTAT
GTTTACACAG ACATGAGTCC TGGGGACAGC GTCATTCAGC TGACAGCGGT AGATGCTGAT
GAAGGCTCTA ATGGGGAGAT CTCCTATGAA ATACTGGTGG GGGGCAAGGG AGACTTCGTG
ATCAACAAGA CCACAGGGCT GGTGAGCATT GCACCAGGCG TGGAGCTGAT CGTGGGACAG
ACGTATGCGC TCACAGTGCA GGCTTCGGAC AACGCCCCGC CTGCAGAAAG AAGGCACTCC
ATCTGCACAG TGTACATCGA GGTGCTTCCT CCTAACAACC AGAGCCCTCC CCGCTTCCCG
CAGCTGATGT ACAGTCTGGA AGTCAGCGAG GCCATGAGGA TCGGTGCTAT TTTATTAAAT
CTACAGGCAA CTGATCGAGA GGGAGATCCA ATCACATATG CCATCGAGAA TGGAGACCCT
CAGAGAGTTT TTAATCTTTC AGAAACCACA GGGATTCTCA GCCTAGGGAA GGCTCTAGAC
CGCGAGAGCA CAGACCGCTA CATCCTCATC GTCACAGCCT CAGATGGCAG ACCGGATGGA
ACCTCAACTG CCACTGTGAA CATAGTGGTG ACGGACGTCA ATGACAACGC TCCCGTGTTC
GATCCCTATC TGCCCAGGAA CCTCTCTGTG GTGGAGGAAG AAGCCAATGC CTTTGTGGGT
CAAGTCCGGG CAACAGACCC AGATGCTGGG ATAAACGGCC AAGTTCACTA CAGCCTGGGG
AACTTCAACA ACCTCTTCCG CATCACATCC AACGGGAGCA TTTACACAGC CGTGAAGCTG
AACAGGGAAG CCAGGGACCA CTATGAACTG GTTGTCGTGG CAACAGATGG AGCAGTCCAC
CCTCGACATT CAACTCTGAC ACTGTACATC AAGGTGTTGG ACATTGATGA TAACAGTCCT
GTTTTTACCA ATTCAACGTA CACAGTTGTC GTTGAAGAGA ATCTGCCAGC CGGGACCTCC
TTTCTTCAAA TAGAGGCCAA GGATGTTGAC CTTGGAGCCA ATGTGTCATA TCGGATCAGA
AGCCCAGAAG TGAAACACCT TTTTGCACTG CATCCATTCA CTGGAGAATT GTCTCTTCTG
AGGAGTTTGG ATTATGAGGC CTTTCCGGAC CAGGAGGCAA GCATCACATT CTTGGTGGAG
GCCTTTGACA TTTATGGGAC TATGCCACCT GGTATAGCAA CAGTCACGGT AATTGTGAAG
GACATGAATG ACTACCCTCC AGTGTTTAGC AAACGCATCT ACAAGGGGAT GGTGGCTCCA
GATGCAGTCA AGGGGACACC AATCACCACC GTTTATGCTG AAGATGCGGA CCCACCTGGG
ATGCCTGCAA GTAGGGTGAG GTATCGAGTG GACGACGTGC AGTTTCCATA CCCAGCCAGT
ATTTTTGATG TAGAGGAAGA TTCTGGAAGA GTAGTAACCC GCGTCAATCT TAATGAAGAG
CCTACTACGA TTTTCAAGCT GGTGGTTGTG GCTTTTGATG ACGGCGAACC TGTGATGTCC
AGCAGTGCCA CGGTGAGAAT TCTTGTCTTA CATCCTGGAG AGATCCCACG CTTCACCCAA
GAGGAATACA GACCTCCTCC TGTAAGTGAG CTTGCGGCCA GAGGGACTGT AGTTGGTGTC
ATTTCTGCTG CTGCCATTAA TCAGAGCATC GTGTACTCCA TTGTGGCAGG AAATGAGGAA
GACAAGTTTG GAATCAACAA TGTCACTGGG GTCATCTATG TGAATTCACC ATTGGATTAC
GAGACAAGGA CCAGCTATGT GCTCCGGGTA CAAGCAGATT CTCTGGAAGT GGTCCTTGCC
AATCTCCGAG TCCCTTCAAA AAGCAATACA GCTAAGGTGT ACATTGAGAT TCAGGATGAA
AACGATCACC CCCCAGTGTT CCAGAAGAAA TTCTACATTG GAGGTGTGTC TGAAGACGCA
AGGATGTTCG CATCTGTGCT CAGAGTGAAG GCCACCGACA GGGACACGGG TAATTACAGT
GCCATGGCCT ACCGGCTCAT CATACCGCCG ATTAAAGAGG GCAAAGAGGG GTTTGTGGTG
GAAACATACA CAGGTCTCAT CAAGACAGCC ATGCTCTTCC ACAATATGAG AAGATCCTAC
TTCAAGTTTC AAGTGATTGC AACTGACGAC TACGGGAAGG GGTTGAGCGG GAAAGCAGAC
GTACTGGTCT CCGTGGTCAA TCAACTGGAT ATGCAGGTCA TTGTCTCCAA TGTGCCCCCT
ACACTAGTGG AAAAGAAGAT AGAAGACCTT ACAGAGATTT TGGATCGCTA CGTTCAGGAG
CAAATTCCTG GTGCCAAGGT TGTGGTGGAG TCCATAGGTG CCCGTCGCCA TGGAGACGCC
TACTCCCTAG AAGACTATAG CAAGTGCGAC CTGACTGTCT ATGCCATCGA CCCGCAGACC
AACAGAGCCA TCGACAGAAA TGAGCTTTTT AAGTTCCTGG ACGGCAAACT GCTCGATATC
AATAAAGACT TCCAGCCGTA TTACGGGGAA GGAGGGCGCA TTCTGGAGAT TCGGACACCT
GAGGCAGTGA CGAGCATCAA GAAGCGAGGA GAAAGCTTGG GGTACACAGA AGGGGCCTTG
CTGGCCTTGG CCTTCATCAT CATCCTCTGT TGCATCCCAG CCATCTTGGT CGTCTTAGTA
AGCTACCGAC AACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATTCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136210.1
CDS422..6112
Misc Feature(1)413..415(+)
Misc Feature(2)1151..1477(+)
Misc Feature(3)1172..1477(+)
Misc Feature(4)1505..1825(+)
Misc Feature(5)1526..1822(+)
Misc Feature(6)1847..2137(+)
Misc Feature(7)1868..2137(+)
Misc Feature(8)2171..2449(+)
Misc Feature(9)2189..2446(+)
Misc Feature(10)2474..2755(+)
Misc Feature(11)2495..2752(+)
Misc Feature(12)2777..3073(+)
Misc Feature(13)2798..3073(+)
Misc Feature(14)3098..3391(+)
Misc Feature(15)3119..3301(+)
Misc Feature(16)3443..3730(+)
Misc Feature(17)3449..3727(+)
Misc Feature(18)3755..4039(+)
Misc Feature(19)3773..3949(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1186
Gene:Pcdh15
Gene Synonym:
Exon (8)1187..1295
Gene:Pcdh15
Gene Synonym:
Exon (9)1296..1408
Gene:Pcdh15
Gene Synonym:
Exon (10)1409..1615
Gene:Pcdh15
Gene Synonym:
Exon (11)1616..1750
Gene:Pcdh15
Gene Synonym:
Exon (12)1751..1900
Gene:Pcdh15
Gene Synonym:
Exon (13)1901..2094
Gene:Pcdh15
Gene Synonym:
Exon (14)2095..2227
Gene:Pcdh15
Gene Synonym:
Exon (15)2228..2307
Gene:Pcdh15
Gene Synonym:
Exon (16)2308..2401
Gene:Pcdh15
Gene Synonym:
Exon (17)2402..2530
Gene:Pcdh15
Gene Synonym:
Exon (18)2531..2836
Gene:Pcdh15
Gene Synonym:
Exon (19)2837..3061
Gene:Pcdh15
Gene Synonym:
Exon (20)3062..3178
Gene:Pcdh15
Gene Synonym:
Exon (21)3179..3319
Gene:Pcdh15
Gene Synonym:
Exon (22)3320..3432
Gene:Pcdh15
Gene Synonym:
Exon (23)3433..3542
Gene:Pcdh15
Gene Synonym:
Exon (24)3543..3683
Gene:Pcdh15
Gene Synonym:
Exon (25)3684..3811
Gene:Pcdh15
Gene Synonym:
Exon (26)3812..4027
Gene:Pcdh15
Gene Synonym:
Exon (27)4028..4116
Gene:Pcdh15
Gene Synonym:
Exon (28)4117..4293
Gene:Pcdh15
Gene Synonym:
Exon (29)4294..4512
Gene:Pcdh15
Gene Synonym:
Exon (30)4513..4668
Gene:Pcdh15
Gene Synonym:
Exon (31)4669..8923
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142738
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant F, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142738

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGGACCGT
GCACAAAATC TGAATGAGAG GCGAACAACC ACCACCACCC TCACAGTAGA TGTTCTAGAT
GGAGATGACC TGGGACCTAT GTTTCTGCCT TGTGTTCTTG TGCCAAACAC ACGTGACTGT
CGTCCACTCA CCTACCAAGC TGCCATTCCT GAACTGAGGA CTCCGGAAGA ACTGAACCCT
ATTTTGGTGA CACCACCTAT CCAAGCCATT GATCAGGACC GAAACATCCA ACCACCATCT
GATCGACCTG GCATCCTCTA CTCCATCCTT GTCGGCACCC CTGAGGATTA CCCCCGCTTC
TTCCATATGC ATCCCAGGAC TGCAGAACTC ACTCTCCTGG AGCCAGTAAA CAGAGACTTC
CATCAAAAAT TTGATTTGGT TATTAAGGCT GAGCAGGACA ATGGCCACCC ACTTCCTGCC
TTTGCTAGTC TGCACATCGA AATACTAGAC GAAAACAATC AGAGTCCATA CTTCACAATG
CCCAGCTATC AAGGATACAT CCTGGAATCC GCCCCAGTGG GAGCCACCAT TTCTGAGAGC
CTAAACTTAA CCACTCCTCT GAGAATTGTA GCTCTGGACA AAGACATAGA AGACACAAAA
GATCCAGAGC TCCACCTCTT CCTGAATGAC TACACCTCGG TCTTCACTGT GACACCCACT
GGTATCACCC GCTACCTCAC CCTGCTTCAA CCTGTGGACA GGGAGGAACA GCAAACCTAC
ACCTTTCTGA TAACAGCGTT TGATGGCGTG CAAGAAAGTG AGCCAGTCGT GGTCAATATC
CGAGTGATGG ATGCAAATGA TAACACGCCC ACCTTCCCTG AAATCTCCTA TGATGTCTAT
GTTTACACAG ACATGAGTCC TGGGGACAGC GTCATTCAGC TGACAGCGGT AGATGCTGAT
GAAGGCTCTA ATGGGGAGAT CTCCTATGAA ATACTGGTGG GGGGCAAGGG AGACTTCGTG
ATCAACAAGA CCACAGGGCT GGTGAGCATT GCACCAGGCG TGGAGCTGAT CGTGGGACAG
ACGTATGCGC TCACAGTGCA GGCTTCGGAC AACGCCCCGC CTGCAGAAAG AAGGCACTCC
ATCTGCACAG TGTACATCGA GGTGCTTCCT CCTAACAACC AGAGCCCTCC CCGCTTCCCG
CAGCTGATGT ACAGTCTGGA AGTCAGCGAG GCCATGAGGA TCGGTGCTAT TTTATTAAAT
CTACAGGCAA CTGATCGAGA GGGAGATCCA ATCACATATG CCATCGAGAA TGGAGACCCT
CAGAGAGTTT TTAATCTTTC AGAAACCACA GGGATTCTCA GCCTAGGGAA GGCTCTAGAC
CGCGAGAGCA CAGACCGCTA CATCCTCATC GTCACAGCCT CAGATGGCAG ACCGGATGGA
ACCTCAACTG CCACTGTGAA CATAGTGGTG ACGGACGTCA ATGACAACGC TCCCGTGTTC
GATCCCTATC TGCCCAGGAA CCTCTCTGTG GTGGAGGAAG AAGCCAATGC CTTTGTGGGT
CAAGTCCGGG CAACAGACCC AGATGCTGGG ATAAACGGCC AAGTTCACTA CAGCCTGGGG
AACTTCAACA ACCTCTTCCG CATCACATCC AACGGGAGCA TTTACACAGC CGTGAAGCTG
AACAGGGAAG CCAGGGACCA CTATGAACTG GTTGTCGTGG CAACAGATGG AGCAGTCCAC
CCTCGACATT CAACTCTGAC ACTGTACATC AAGGTGTTGG ACATTGATGA TAACAGTCCT
GTTTTTACCA ATTCAACGTA CACAGTTGTC GTTGAAGAGA ATCTGCCAGC CGGGACCTCC
TTTCTTCAAA TAGAGGCCAA GGATGTTGAC CTTGGAGCCA ATGTGTCATA TCGGATCAGA
AGCCCAGAAG TGAAACACCT TTTTGCACTG CATCCATTCA CTGGAGAATT GTCTCTTCTG
AGGAGTTTGG ATTATGAGGC CTTTCCGGAC CAGGAGGCAA GCATCACATT CTTGGTGGAG
GCCTTTGACA TTTATGGGAC TATGCCACCT GGTATAGCAA CAGTCACGGT AATTGTGAAG
GACATGAATG ACTACCCTCC AGTGTTTAGC AAACGCATCT ACAAGGGGAT GGTGGCTCCA
GATGCAGTCA AGGGGACACC AATCACCACC GTTTATGCTG AAGATGCGGA CCCACCTGGG
ATGCCTGCAA GTAGGGTGAG GTATCGAGTG GACGACGTGC AGTTTCCATA CCCAGCCAGT
ATTTTTGATG TAGAGGAAGA TTCTGGAAGA GTAGTAACCC GCGTCAATCT TAATGAAGAG
CCTACTACGA TTTTCAAGCT GGTGGTTGTG GCTTTTGATG ACGGCGAACC TGTGATGTCC
AGCAGTGCCA CGGTGAGAAT TCTTGTCTTA CATCCTGGAG AGATCCCACG CTTCACCCAA
GAGGAATACA GACCTCCTCC TGTAAGTGAG CTTGCGGCCA GAGGGACTGT AGTTGGTGTC
ATTTCTGCTG CTGCCATTAA TCAGAGCATC GTGTACTCCA TTGTGGCAGG AAATGAGGAA
GACAAGTTTG GAATCAACAA TGTCACTGGG GTCATCTATG TGAATTCACC ATTGGATTAC
GAGACAAGGA CCAGCTATGT GCTCCGGGTA CAAGCAGATT CTCTGGAAGT GGTCCTTGCC
AATCTCCGAG TCCCTTCAAA AAGCAATACA GCTAAGGTGT ACATTGAGAT TCAGGATGAA
AACGATCACC CCCCAGTGTT CCAGAAGAAA TTCTACATTG GAGGTGTGTC TGAAGACGCA
AGGATGTTCG CATCTGTGCT CAGAGTGAAG GCCACCGACA GGGACACGGG TAATTACAGT
GCCATGGCCT ACCGGCTCAT CATACCGCCG ATTAAAGAGG GCAAAGAGGG GTTTGTGGTG
GAAACATACA CAGGTCTCAT CAAGACAGCC ATGCTCTTCC ACAATATGAG AAGATCCTAC
TTCAAGTTTC AAGTGATTGC AACTGACGAC TACGGGAAGG GGTTGAGCGG GAAAGCAGAC
GTACTGGTCT CCGTGGTCAA TCAACTGGAT ATGCAGGTCA TTGTCTCCAA TGTGCCCCCT
ACACTAGTGG AAAAGAAGAT AGAAGACCTT ACAGAGATTT TGGATCGCTA CGTTCAGGAG
CAAATTCCTG GTGCCAAGGT TGTGGTGGAG TCCATAGGTG CCCGTCGCCA TGGAGACGCC
TACTCCCTAG AAGACTATAG CAAGTGCGAC CTGACTGTCT ATGCCATCGA CCCGCAGACC
AACAGAGCCA TCGACAGAAA TGAGCTTTTT AAGTTCCTGG ACGGCAAACT GCTCGATATC
AATAAAGACT TCCAGCCGTA TTACGGGGAA GGAGGGCGCA TTCTGGAGAT TCGGACACCT
GAGGCAGTGA CGAGCATCAA GAAGCGAGGA GAAAGCTTGG GGTACACAGA AGGGGCCTTG
CTGGCCTTGG CCTTCATCAT CATCCTCTGT TGCATCCCAG CCATCTTGGT CGTCTTAGTA
AGCTACCGAC AACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATTCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13216
Clone ID Related Accession (Same CDS sequence) NM_001142739
Accession Version NM_001142739.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5751bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-9 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354402.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (G) lacks two alternate in-frame exons in the 5' coding region, compared to variant A. The resulting isoform (CD1-9), also known as protocadherin-15-CD1 isoform 9, lacks a 27-aa segment near the N-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354402.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GGTACAATTC TGGTGGATAA CATGTTGATT
AAGGGGACTG CCGGAGGACC AGACCCCACC ATAGAGCTCT CTTTAAAGGA CAACGTGGAC
TACTGGGTGT TGCTGGACCC CGTTAAACAG ATGCTTTTCC TGAACAGTAC CGGAAGAGTT
CTGGATAGAG ACCCACCAAT GAACATACAC TCCATTGTGG TGCAAGTCCA GTGTGTCAAC
AAGAAGGTTG GCACAGTTAT CTATCATGAA GTACGCATCG TGGTGCGAGA TCGGAATGAC
AACTCCCCCA CATTCAAGCA TGAAAGCTAC TATGCCACCG TGAATGAGCT CACTCCAGTT
GGCACCACGA TATTCACGGG GTTCTCGGGA GACAATGGAG CTACAGACAT AGACGATGGC
CCTAATGGAC AGATAGAATA CGTGATTCAG TACAACCCAG AAGATCCGAC ATCCAACGAC
ACCTTTGAAA TTCCACTCAT GCTGACTGGC AACGTGGTAC TGAGGAAAAG ACTCAACTAT
GAGGATAAGA CTCGCTACTA TGTCATCATC CAAGCAAATG ACCGTGCACA AAATCTGAAT
GAGAGGCGAA CAACCACCAC CACCCTCACA GTAGATGTTC TAGATGGAGA TGACCTGGGA
CCTATGTTTC TGCCTTGTGT TCTTGTGCCA AACACACGTG ACTGTCGTCC ACTCACCTAC
CAAGCTGCCA TTCCTGAACT GAGGACTCCG GAAGAACTGA ACCCTATTTT GGTGACACCA
CCTATCCAAG CCATTGATCA GGACCGAAAC ATCCAACCAC CATCTGATCG ACCTGGCATC
CTCTACTCCA TCCTTGTCGG CACCCCTGAG GATTACCCCC GCTTCTTCCA TATGCATCCC
AGGACTGCAG AACTCACTCT CCTGGAGCCA GTAAACAGAG ACTTCCATCA AAAATTTGAT
TTGGTTATTA AGGCTGAGCA GGACAATGGC CACCCACTTC CTGCCTTTGC TAGTCTGCAC
ATCGAAATAC TAGACGAAAA CAATCAGAGT CCATACTTCA CAATGCCCAG CTATCAAGGA
TACATCCTGG AATCCGCCCC AGTGGGAGCC ACCATTTCTG AGAGCCTAAA CTTAACCACT
CCTCTGAGAA TTGTAGCTCT GGACAAAGAC ATAGAAGACA CAAAAGATCC AGAGCTCCAC
CTCTTCCTGA ATGACTACAC CTCGGTCTTC ACTGTGACAC CCACTGGTAT CACCCGCTAC
CTCACCCTGC TTCAACCTGT GGACAGGGAG GAACAGCAAA CCTACACCTT TCTGATAACA
GCGTTTGATG GCGTGCAAGA AAGTGAGCCA GTCGTGGTCA ATATCCGAGT GATGGATGCA
AATGATAACA CGCCCACCTT CCCTGAAATC TCCTATGATG TCTATGTTTA CACAGACATG
AGTCCTGGGG ACAGCGTCAT TCAGCTGACA GCGGTAGATG CTGATGAAGG CTCTAATGGG
GAGATCTCCT ATGAAATACT GGTGGGGGGC AAGGGAGACT TCGTGATCAA CAAGACCACA
GGGCTGGTGA GCATTGCACC AGGCGTGGAG CTGATCGTGG GACAGACGTA TGCGCTCACA
GTGCAGGCTT CGGACAACGC CCCGCCTGCA GAAAGAAGGC ACTCCATCTG CACAGTGTAC
ATCGAGGTGC TTCCTCCTAA CAACCAGAGC CCTCCCCGCT TCCCGCAGCT GATGTACAGT
CTGGAAGTCA GCGAGGCCAT GAGGATCGGT GCTATTTTAT TAAATCTACA GGCAACTGAT
CGAGAGGGAG ATCCAATCAC ATATGCCATC GAGAATGGAG ACCCTCAGAG AGTTTTTAAT
CTTTCAGAAA CCACAGGGAT TCTCAGCCTA GGGAAGGCTC TAGACCGCGA GAGCACAGAC
CGCTACATCC TCATCGTCAC AGCCTCAGAT GGCAGACCGG ATGGAACCTC AACTGCCACT
GTGAACATAG TGGTGACGGA CGTCAATGAC AACGCTCCCG TGTTCGATCC CTATCTGCCC
AGGAACCTCT CTGTGGTGGA GGAAGAAGCC AATGCCTTTG TGGGTCAAGT CCGGGCAACA
GACCCAGATG CTGGGATAAA CGGCCAAGTT CACTACAGCC TGGGGAACTT CAACAACCTC
TTCCGCATCA CATCCAACGG GAGCATTTAC ACAGCCGTGA AGCTGAACAG GGAAGCCAGG
GACCACTATG AACTGGTTGT CGTGGCAACA GATGGAGCAG TCCACCCTCG ACATTCAACT
CTGACACTGT ACATCAAGGT GTTGGACATT GATGATAACA GTCCTGTTTT TACCAATTCA
ACGTACACAG TTGTCGTTGA AGAGAATCTG CCAGCCGGGA CCTCCTTTCT TCAAATAGAG
GCCAAGGATG TTGACCTTGG AGCCAATGTG TCATATCGGA TCAGAAGCCC AGAAGTGAAA
CACCTTTTTG CACTGCATCC ATTCACTGGA GAATTGTCTC TTCTGAGGAG TTTGGATTAT
GAGGCCTTTC CGGACCAGGA GGCAAGCATC ACATTCTTGG TGGAGGCCTT TGACATTTAT
GGGACTATGC CACCTGGTAT AGCAACAGTC ACGGTAATTG TGAAGGACAT GAATGACTAC
CCTCCAGTGT TTAGCAAACG CATCTACAAG GGGATGGTGG CTCCAGATGC AGTCAAGGGG
ACACCAATCA CCACCGTTTA TGCTGAAGAT GCGGACCCAC CTGGGATGCC TGCAAGTAGG
GTGAGGTATC GAGTGGACGA CGTGCAGTTT CCATACCCAG CCAGTATTTT TGATGTAGAG
GAAGATTCTG GAAGAGTAGT AACCCGCGTC AATCTTAATG AAGAGCCTAC TACGATTTTC
AAGCTGGTGG TTGTGGCTTT TGATGACGGC GAACCTGTGA TGTCCAGCAG TGCCACGGTG
AGAATTCTTG TCTTACATCC TGGAGAGATC CCACGCTTCA CCCAAGAGGA ATACAGACCT
CCTCCTGTAA GTGAGCTTGC GGCCAGAGGG ACTGTAGTTG GTGTCATTTC TGCTGCTGCC
ATTAATCAGA GCATCGTGTA CTCCATTGTG GCAGGAAATG AGGAAGACAA GTTTGGAATC
AACAATGTCA CTGGGGTCAT CTATGTGAAT TCACCATTGG ATTACGAGAC AAGGACCAGC
TATGTGCTCC GGGTACAAGC AGATTCTCTG GAAGTGGTCC TTGCCAATCT CCGAGTCCCT
TCAAAAAGCA ATACAGCTAA GGTGTACATT GAGATTCAGG ATGAAAACGA TCACCCCCCA
GTGTTCCAGA AGAAATTCTA CATTGGAGGT GTGTCTGAAG ACGCAAGGAT GTTCGCATCT
GTGCTCAGAG TGAAGGCCAC CGACAGGGAC ACGGGTAATT ACAGTGCCAT GGCCTACCGG
CTCATCATAC CGCCGATTAA AGAGGGCAAA GAGGGGTTTG TGGTGGAAAC ATACACAGGT
CTCATCAAGA CAGCCATGCT CTTCCACAAT ATGAGAAGAT CCTACTTCAA GTTTCAAGTG
ATTGCAACTG ACGACTACGG GAAGGGGTTG AGCGGGAAAG CAGACGTACT GGTCTCCGTG
GTCAATCAAC TGGATATGCA GGTCATTGTC TCCAATGTGC CCCCTACACT AGTGGAAAAG
AAGATAGAAG ACCTTACAGA GATTTTGGAT CGCTACGTTC AGGAGCAAAT TCCTGGTGCC
AAGGTTGTGG TGGAGTCCAT AGGTGCCCGT CGCCATGGAG ACGCCTACTC CCTAGAAGAC
TATAGCAAGT GCGACCTGAC TGTCTATGCC ATCGACCCGC AGACCAACAG AGCCATCGAC
AGAAATGAGC TTTTTAAGTT CCTGGACGGC AAACTGCTCG ATATCAATAA AGACTTCCAG
CCGTATTACG GGGAAGGAGG GCGCATTCTG GAGATTCGGA CACCTGAGGC AGTGACGAGC
ATCAAGAAGC GAGGAGAAAG CTTGGGGTAC ACAGAAGGGG CCTTGCTGGC CTTGGCCTTC
ATCATCATCC TCTGTTGCAT CCCAGCCATC TTGGTCGTCT TAGTAAGCTA CCGACAGTTT
AAAGTACGCC AGGCTGAGTG CACGAAGACC GCAAGAATTC AGTCTGCTAT GCCTGCAGCC
AAGCCTGCAG CTCCTGTACC AGCTGCGCCT GCGCCGCCCC CGCCCCCGCC ACCACCACCA
CCAGGAGCAC ATCTCTATGA AGAACTGGGA GAGAGCGCAA TGCATAATCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136211.1
CDS422..6172
Misc Feature(1)413..415(+)
Misc Feature(2)806..1075(+)
Misc Feature(3)827..1024(+)
Misc Feature(4)1196..1522(+)
Misc Feature(5)1217..1522(+)
Misc Feature(6)1550..1870(+)
Misc Feature(7)1571..1867(+)
Misc Feature(8)1892..2182(+)
Misc Feature(9)1913..2182(+)
Misc Feature(10)2216..2494(+)
Misc Feature(11)2234..2491(+)
Misc Feature(12)2519..2800(+)
Misc Feature(13)2540..2797(+)
Misc Feature(14)2822..3118(+)
Misc Feature(15)2843..3118(+)
Misc Feature(16)3143..3436(+)
Misc Feature(17)3164..3346(+)
Misc Feature(18)3488..3775(+)
Misc Feature(19)3494..3772(+)
Misc Feature(20)3800..4084(+)
Misc Feature(21)3818..3994(+)
Misc Feature(22)4484..4546(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..673
Gene:Pcdh15
Gene Synonym:
Exon (4)674..829
Gene:Pcdh15
Gene Synonym:
Exon (5)830..949
Gene:Pcdh15
Gene Synonym:
Exon (6)950..1060
Gene:Pcdh15
Gene Synonym:
Exon (7)1061..1231
Gene:Pcdh15
Gene Synonym:
Exon (8)1232..1340
Gene:Pcdh15
Gene Synonym:
Exon (9)1341..1453
Gene:Pcdh15
Gene Synonym:
Exon (10)1454..1660
Gene:Pcdh15
Gene Synonym:
Exon (11)1661..1795
Gene:Pcdh15
Gene Synonym:
Exon (12)1796..1945
Gene:Pcdh15
Gene Synonym:
Exon (13)1946..2139
Gene:Pcdh15
Gene Synonym:
Exon (14)2140..2272
Gene:Pcdh15
Gene Synonym:
Exon (15)2273..2352
Gene:Pcdh15
Gene Synonym:
Exon (16)2353..2446
Gene:Pcdh15
Gene Synonym:
Exon (17)2447..2575
Gene:Pcdh15
Gene Synonym:
Exon (18)2576..2881
Gene:Pcdh15
Gene Synonym:
Exon (19)2882..3106
Gene:Pcdh15
Gene Synonym:
Exon (20)3107..3223
Gene:Pcdh15
Gene Synonym:
Exon (21)3224..3364
Gene:Pcdh15
Gene Synonym:
Exon (22)3365..3477
Gene:Pcdh15
Gene Synonym:
Exon (23)3478..3587
Gene:Pcdh15
Gene Synonym:
Exon (24)3588..3728
Gene:Pcdh15
Gene Synonym:
Exon (25)3729..3856
Gene:Pcdh15
Gene Synonym:
Exon (26)3857..4072
Gene:Pcdh15
Gene Synonym:
Exon (27)4073..4161
Gene:Pcdh15
Gene Synonym:
Exon (28)4162..4338
Gene:Pcdh15
Gene Synonym:
Exon (29)4339..4557
Gene:Pcdh15
Gene Synonym:
Exon (30)4558..4566
Gene:Pcdh15
Gene Synonym:
Exon (31)4567..4722
Gene:Pcdh15
Gene Synonym:
Exon (32)4723..4728
Gene:Pcdh15
Gene Synonym:
Exon (33)4729..8983
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142739
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant G, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142739

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GGTACAATTC TGGTGGATAA CATGTTGATT
AAGGGGACTG CCGGAGGACC AGACCCCACC ATAGAGCTCT CTTTAAAGGA CAACGTGGAC
TACTGGGTGT TGCTGGACCC CGTTAAACAG ATGCTTTTCC TGAACAGTAC CGGAAGAGTT
CTGGATAGAG ACCCACCAAT GAACATACAC TCCATTGTGG TGCAAGTCCA GTGTGTCAAC
AAGAAGGTTG GCACAGTTAT CTATCATGAA GTACGCATCG TGGTGCGAGA TCGGAATGAC
AACTCCCCCA CATTCAAGCA TGAAAGCTAC TATGCCACCG TGAATGAGCT CACTCCAGTT
GGCACCACGA TATTCACGGG GTTCTCGGGA GACAATGGAG CTACAGACAT AGACGATGGC
CCTAATGGAC AGATAGAATA CGTGATTCAG TACAACCCAG AAGATCCGAC ATCCAACGAC
ACCTTTGAAA TTCCACTCAT GCTGACTGGC AACGTGGTAC TGAGGAAAAG ACTCAACTAT
GAGGATAAGA CTCGCTACTA TGTCATCATC CAAGCAAATG ACCGTGCACA AAATCTGAAT
GAGAGGCGAA CAACCACCAC CACCCTCACA GTAGATGTTC TAGATGGAGA TGACCTGGGA
CCTATGTTTC TGCCTTGTGT TCTTGTGCCA AACACACGTG ACTGTCGTCC ACTCACCTAC
CAAGCTGCCA TTCCTGAACT GAGGACTCCG GAAGAACTGA ACCCTATTTT GGTGACACCA
CCTATCCAAG CCATTGATCA GGACCGAAAC ATCCAACCAC CATCTGATCG ACCTGGCATC
CTCTACTCCA TCCTTGTCGG CACCCCTGAG GATTACCCCC GCTTCTTCCA TATGCATCCC
AGGACTGCAG AACTCACTCT CCTGGAGCCA GTAAACAGAG ACTTCCATCA AAAATTTGAT
TTGGTTATTA AGGCTGAGCA GGACAATGGC CACCCACTTC CTGCCTTTGC TAGTCTGCAC
ATCGAAATAC TAGACGAAAA CAATCAGAGT CCATACTTCA CAATGCCCAG CTATCAAGGA
TACATCCTGG AATCCGCCCC AGTGGGAGCC ACCATTTCTG AGAGCCTAAA CTTAACCACT
CCTCTGAGAA TTGTAGCTCT GGACAAAGAC ATAGAAGACA CAAAAGATCC AGAGCTCCAC
CTCTTCCTGA ATGACTACAC CTCGGTCTTC ACTGTGACAC CCACTGGTAT CACCCGCTAC
CTCACCCTGC TTCAACCTGT GGACAGGGAG GAACAGCAAA CCTACACCTT TCTGATAACA
GCGTTTGATG GCGTGCAAGA AAGTGAGCCA GTCGTGGTCA ATATCCGAGT GATGGATGCA
AATGATAACA CGCCCACCTT CCCTGAAATC TCCTATGATG TCTATGTTTA CACAGACATG
AGTCCTGGGG ACAGCGTCAT TCAGCTGACA GCGGTAGATG CTGATGAAGG CTCTAATGGG
GAGATCTCCT ATGAAATACT GGTGGGGGGC AAGGGAGACT TCGTGATCAA CAAGACCACA
GGGCTGGTGA GCATTGCACC AGGCGTGGAG CTGATCGTGG GACAGACGTA TGCGCTCACA
GTGCAGGCTT CGGACAACGC CCCGCCTGCA GAAAGAAGGC ACTCCATCTG CACAGTGTAC
ATCGAGGTGC TTCCTCCTAA CAACCAGAGC CCTCCCCGCT TCCCGCAGCT GATGTACAGT
CTGGAAGTCA GCGAGGCCAT GAGGATCGGT GCTATTTTAT TAAATCTACA GGCAACTGAT
CGAGAGGGAG ATCCAATCAC ATATGCCATC GAGAATGGAG ACCCTCAGAG AGTTTTTAAT
CTTTCAGAAA CCACAGGGAT TCTCAGCCTA GGGAAGGCTC TAGACCGCGA GAGCACAGAC
CGCTACATCC TCATCGTCAC AGCCTCAGAT GGCAGACCGG ATGGAACCTC AACTGCCACT
GTGAACATAG TGGTGACGGA CGTCAATGAC AACGCTCCCG TGTTCGATCC CTATCTGCCC
AGGAACCTCT CTGTGGTGGA GGAAGAAGCC AATGCCTTTG TGGGTCAAGT CCGGGCAACA
GACCCAGATG CTGGGATAAA CGGCCAAGTT CACTACAGCC TGGGGAACTT CAACAACCTC
TTCCGCATCA CATCCAACGG GAGCATTTAC ACAGCCGTGA AGCTGAACAG GGAAGCCAGG
GACCACTATG AACTGGTTGT CGTGGCAACA GATGGAGCAG TCCACCCTCG ACATTCAACT
CTGACACTGT ACATCAAGGT GTTGGACATT GATGATAACA GTCCTGTTTT TACCAATTCA
ACGTACACAG TTGTCGTTGA AGAGAATCTG CCAGCCGGGA CCTCCTTTCT TCAAATAGAG
GCCAAGGATG TTGACCTTGG AGCCAATGTG TCATATCGGA TCAGAAGCCC AGAAGTGAAA
CACCTTTTTG CACTGCATCC ATTCACTGGA GAATTGTCTC TTCTGAGGAG TTTGGATTAT
GAGGCCTTTC CGGACCAGGA GGCAAGCATC ACATTCTTGG TGGAGGCCTT TGACATTTAT
GGGACTATGC CACCTGGTAT AGCAACAGTC ACGGTAATTG TGAAGGACAT GAATGACTAC
CCTCCAGTGT TTAGCAAACG CATCTACAAG GGGATGGTGG CTCCAGATGC AGTCAAGGGG
ACACCAATCA CCACCGTTTA TGCTGAAGAT GCGGACCCAC CTGGGATGCC TGCAAGTAGG
GTGAGGTATC GAGTGGACGA CGTGCAGTTT CCATACCCAG CCAGTATTTT TGATGTAGAG
GAAGATTCTG GAAGAGTAGT AACCCGCGTC AATCTTAATG AAGAGCCTAC TACGATTTTC
AAGCTGGTGG TTGTGGCTTT TGATGACGGC GAACCTGTGA TGTCCAGCAG TGCCACGGTG
AGAATTCTTG TCTTACATCC TGGAGAGATC CCACGCTTCA CCCAAGAGGA ATACAGACCT
CCTCCTGTAA GTGAGCTTGC GGCCAGAGGG ACTGTAGTTG GTGTCATTTC TGCTGCTGCC
ATTAATCAGA GCATCGTGTA CTCCATTGTG GCAGGAAATG AGGAAGACAA GTTTGGAATC
AACAATGTCA CTGGGGTCAT CTATGTGAAT TCACCATTGG ATTACGAGAC AAGGACCAGC
TATGTGCTCC GGGTACAAGC AGATTCTCTG GAAGTGGTCC TTGCCAATCT CCGAGTCCCT
TCAAAAAGCA ATACAGCTAA GGTGTACATT GAGATTCAGG ATGAAAACGA TCACCCCCCA
GTGTTCCAGA AGAAATTCTA CATTGGAGGT GTGTCTGAAG ACGCAAGGAT GTTCGCATCT
GTGCTCAGAG TGAAGGCCAC CGACAGGGAC ACGGGTAATT ACAGTGCCAT GGCCTACCGG
CTCATCATAC CGCCGATTAA AGAGGGCAAA GAGGGGTTTG TGGTGGAAAC ATACACAGGT
CTCATCAAGA CAGCCATGCT CTTCCACAAT ATGAGAAGAT CCTACTTCAA GTTTCAAGTG
ATTGCAACTG ACGACTACGG GAAGGGGTTG AGCGGGAAAG CAGACGTACT GGTCTCCGTG
GTCAATCAAC TGGATATGCA GGTCATTGTC TCCAATGTGC CCCCTACACT AGTGGAAAAG
AAGATAGAAG ACCTTACAGA GATTTTGGAT CGCTACGTTC AGGAGCAAAT TCCTGGTGCC
AAGGTTGTGG TGGAGTCCAT AGGTGCCCGT CGCCATGGAG ACGCCTACTC CCTAGAAGAC
TATAGCAAGT GCGACCTGAC TGTCTATGCC ATCGACCCGC AGACCAACAG AGCCATCGAC
AGAAATGAGC TTTTTAAGTT CCTGGACGGC AAACTGCTCG ATATCAATAA AGACTTCCAG
CCGTATTACG GGGAAGGAGG GCGCATTCTG GAGATTCGGA CACCTGAGGC AGTGACGAGC
ATCAAGAAGC GAGGAGAAAG CTTGGGGTAC ACAGAAGGGG CCTTGCTGGC CTTGGCCTTC
ATCATCATCC TCTGTTGCAT CCCAGCCATC TTGGTCGTCT TAGTAAGCTA CCGACAGTTT
AAAGTACGCC AGGCTGAGTG CACGAAGACC GCAAGAATTC AGTCTGCTAT GCCTGCAGCC
AAGCCTGCAG CTCCTGTACC AGCTGCGCCT GCGCCGCCCC CGCCCCCGCC ACCACCACCA
CCAGGAGCAC ATCTCTATGA AGAACTGGGA GAGAGCGCAA TGCATAATCT TTTCCTTCTC
TACCATTTTG AACAAAGCAG GGGAAATAAC TCAGTCCCAG AAGACAGGAG CAGTCATCGC
GATGGGATGG CCTTTTCCTC CAGTACCACT GAGTCTCATG AGCCAGCTCA TGTAGAGGGA
CCACTTAAGG AGAGCCAGCC TAACCCAGCA AGGACGTTCT CATTTGTTCC TGATGAGGAT
AACTTAAGTA CCCATAATCC CCTTTACATG GAAAGTATAG GTCAAAGGTC AACAAACTCA
GACCTTCAGC CACGAACAGA TTTTGAAGAG CTGTTGGCAC CCAGAACACA AGTTAAGAGT
CAGTCTCTGA GGGGCCCAAG AGAAAAGATC CAGAGGGTGT GGAATCAGTC TGTGAGCTTT
CCTAGGCGGC TCATGTGGAA AGCCCCAAAC AGGCCAGAGA CCATAGACCT GGTGGAGTGG
CAGATCACCA ATCAGAGAGC TGAATGCGAA AGCGCCAGAT GCCACCCAAG CCAGAGAGGT
AGCAGCAACG TTCTGCTGGC AACTGAAGAT GCCCACGAGT CAGAGAAAGA AGGGGGACAC
AGAGACACCC TAATCGTCCA GCAAACAGAG CAGCTGAAAT CTCTGTCTTC TGGCTCTTCT
TTTTCCTCCT CTTGGTCTCA CTTTTCTTTC TCAACTCTGC CAACGATTTC CAGAGCGGTG
GAACTCGGGT CGGAACCTAA TGTGGTCACT TCTCCCGCTG ACTGCACCTT GGAACTTTCT
CCTCCTCTGA GACCCCGTAT TTTAAACTCC TTAAGCTCTA AGAGAGAGAC TCCCACATGT
GCATCAGATA CAGAACCAAA AAGGAACTCT TTTGAGATCG CTCCCCATCC ACCTAGCATC
TCTGCTCCCC TCCCACATCC GCCTCTTCCT AGACCTCCCA TTGCCTTTAC CACTTTTCCT
CTTCCCCTTT CTCCCCCTAA CCCTCCTCCC CCACAACTTG TTACATTTTC TCTTCCCATT
TCTACACCCC CTACTTCTTC TCTACCTCTT CCTCCTCCAC TGTCACTTCC TCCTCCTCCT
CGGCCACCAG CTCCCCGCCT CTTCCCACAG CCTCCTTCCA CGTCCATTCC ATCCACAGAC
AGCATCTCTG CACCAGCTGC TAAATGCACT GCCAGTGCCA CACACGCCAG AGAAACCACG
TCTACGACAC AGCCACCAGC ATCCAACCCG CAGTGGGGGG CAGAACCCCA CAGACATCCA
AAAGGGATCC TCAGACATGT GAAAAACTTG GCAGAGCTCG AGAAATCAGT GTCTAACATG
TACAGTCACA TAGAAAAAAA CTGCCCACCT GCAGATCCCT CAAAACTACA CACGTTTTGC
CCTGCAGAGA AAACAGGCAT GAAAATCACA CATGACCAGA GCCAGGAAAC GTTGGTTAGA
GTTGTTGAGG GAATTGACGT GCAACCTCAC AGTCAATCAA CATCTTTGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13244
Clone ID Related Accession (Same CDS sequence) NM_001142740
Accession Version NM_001142740.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5802bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-7 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354403.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (E) lacks three alternate in-frame exons, compared to variant A. The resulting isoform (CD1-7), also known as protocadherin-15-CD1 isoform 7, has the same N- and C-termini but lacks three internal segments, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354403.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164136, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAACGCCAGG CTGAGTGCAC GAAGACCGCA AGAATTCAGT CTGCTATGCC TGCAGCCAAG
CCTGCAGCTC CTGTACCAGC TGCGCCTGCG CCGCCCCCGC CCCCGCCACC ACCACCACCA
GGAGCACATC TCTATGAAGA ACTGGGAGAG AGCGCAATTC TTTTCCTTCT CTACCATTTT
GAACAAAGCA GGGGAAATAA CTCAGTCCCA GAAGACAGGA GCAGTCATCG CGATGGGATG
GCCTTTTCCT CCAGTACCAC TGAGTCTCAT GAGCCAGCTC ATGTAGAGGG ACCACTTAAG
GAGAGCCAGC CTAACCCAGC AAGGACGTTC TCATTTGTTC CTGATGAGGA TAACTTAAGT
ACCCATAATC CCCTTTACAT GGAAAGTATA GGTCAAAGGT CAACAAACTC AGACCTTCAG
CCACGAACAG ATTTTGAAGA GCTGTTGGCA CCCAGAACAC AAGTTAAGAG TCAGTCTCTG
AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG TGGAATCAGT CTGTGAGCTT TCCTAGGCGG
CTCATGTGGA AAGCCCCAAA CAGGCCAGAG ACCATAGACC TGGTGGAGTG GCAGATCACC
AATCAGAGAG CTGAATGCGA AAGCGCCAGA TGCCACCCAA GCCAGAGAGG TAGCAGCAAC
GTTCTGCTGG CAACTGAAGA TGCCCACGAG TCAGAGAAAG AAGGGGGACA CAGAGACACC
CTAATCGTCC AGCAAACAGA GCAGCTGAAA TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC
TCTTGGTCTC ACTTTTCTTT CTCAACTCTG CCAACGATTT CCAGAGCGGT GGAACTCGGG
TCGGAACCTA ATGTGGTCAC TTCTCCCGCT GACTGCACCT TGGAACTTTC TCCTCCTCTG
AGACCCCGTA TTTTAAACTC CTTAAGCTCT AAGAGAGAGA CTCCCACATG TGCATCAGAT
ACAGAACCAA AAAGGAACTC TTTTGAGATC GCTCCCCATC CACCTAGCAT CTCTGCTCCC
CTCCCACATC CGCCTCTTCC TAGACCTCCC ATTGCCTTTA CCACTTTTCC TCTTCCCCTT
TCTCCCCCTA ACCCTCCTCC CCCACAACTT GTTACATTTT CTCTTCCCAT TTCTACACCC
CCTACTTCTT CTCTACCTCT TCCTCCTCCA CTGTCACTTC CTCCTCCTCC TCGGCCACCA
GCTCCCCGCC TCTTCCCACA GCCTCCTTCC ACGTCCATTC CATCCACAGA CAGCATCTCT
GCACCAGCTG CTAAATGCAC TGCCAGTGCC ACACACGCCA GAGAAACCAC GTCTACGACA
CAGCCACCAG CATCCAACCC GCAGTGGGGG GCAGAACCCC ACAGACATCC AAAAGGGATC
CTCAGACATG TGAAAAACTT GGCAGAGCTC GAGAAATCAG TGTCTAACAT GTACAGTCAC
ATAGAAAAAA ACTGCCCACC TGCAGATCCC TCAAAACTAC ACACGTTTTG CCCTGCAGAG
AAAACAGGCA TGAAAATCAC ACATGACCAG AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG
GGAATTGACG TGCAACCTCA CAGTCAATCA ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136212.1
CDS422..6223
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..3841(+)
Misc Feature(19)3560..3838(+)
Misc Feature(20)3866..4150(+)
Misc Feature(21)3884..4060(+)
Misc Feature(22)4550..4612(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..3922
Gene:Pcdh15
Gene Synonym:
Exon (27)3923..4138
Gene:Pcdh15
Gene Synonym:
Exon (28)4139..4227
Gene:Pcdh15
Gene Synonym:
Exon (29)4228..4404
Gene:Pcdh15
Gene Synonym:
Exon (30)4405..4623
Gene:Pcdh15
Gene Synonym:
Exon (31)4624..4779
Gene:Pcdh15
Gene Synonym:
Exon (32)4780..9034
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142740
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant E, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142740

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAACGCCAGG CTGAGTGCAC GAAGACCGCA AGAATTCAGT CTGCTATGCC TGCAGCCAAG
CCTGCAGCTC CTGTACCAGC TGCGCCTGCG CCGCCCCCGC CCCCGCCACC ACCACCACCA
GGAGCACATC TCTATGAAGA ACTGGGAGAG AGCGCAATTC TTTTCCTTCT CTACCATTTT
GAACAAAGCA GGGGAAATAA CTCAGTCCCA GAAGACAGGA GCAGTCATCG CGATGGGATG
GCCTTTTCCT CCAGTACCAC TGAGTCTCAT GAGCCAGCTC ATGTAGAGGG ACCACTTAAG
GAGAGCCAGC CTAACCCAGC AAGGACGTTC TCATTTGTTC CTGATGAGGA TAACTTAAGT
ACCCATAATC CCCTTTACAT GGAAAGTATA GGTCAAAGGT CAACAAACTC AGACCTTCAG
CCACGAACAG ATTTTGAAGA GCTGTTGGCA CCCAGAACAC AAGTTAAGAG TCAGTCTCTG
AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG TGGAATCAGT CTGTGAGCTT TCCTAGGCGG
CTCATGTGGA AAGCCCCAAA CAGGCCAGAG ACCATAGACC TGGTGGAGTG GCAGATCACC
AATCAGAGAG CTGAATGCGA AAGCGCCAGA TGCCACCCAA GCCAGAGAGG TAGCAGCAAC
GTTCTGCTGG CAACTGAAGA TGCCCACGAG TCAGAGAAAG AAGGGGGACA CAGAGACACC
CTAATCGTCC AGCAAACAGA GCAGCTGAAA TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC
TCTTGGTCTC ACTTTTCTTT CTCAACTCTG CCAACGATTT CCAGAGCGGT GGAACTCGGG
TCGGAACCTA ATGTGGTCAC TTCTCCCGCT GACTGCACCT TGGAACTTTC TCCTCCTCTG
AGACCCCGTA TTTTAAACTC CTTAAGCTCT AAGAGAGAGA CTCCCACATG TGCATCAGAT
ACAGAACCAA AAAGGAACTC TTTTGAGATC GCTCCCCATC CACCTAGCAT CTCTGCTCCC
CTCCCACATC CGCCTCTTCC TAGACCTCCC ATTGCCTTTA CCACTTTTCC TCTTCCCCTT
TCTCCCCCTA ACCCTCCTCC CCCACAACTT GTTACATTTT CTCTTCCCAT TTCTACACCC
CCTACTTCTT CTCTACCTCT TCCTCCTCCA CTGTCACTTC CTCCTCCTCC TCGGCCACCA
GCTCCCCGCC TCTTCCCACA GCCTCCTTCC ACGTCCATTC CATCCACAGA CAGCATCTCT
GCACCAGCTG CTAAATGCAC TGCCAGTGCC ACACACGCCA GAGAAACCAC GTCTACGACA
CAGCCACCAG CATCCAACCC GCAGTGGGGG GCAGAACCCC ACAGACATCC AAAAGGGATC
CTCAGACATG TGAAAAACTT GGCAGAGCTC GAGAAATCAG TGTCTAACAT GTACAGTCAC
ATAGAAAAAA ACTGCCCACC TGCAGATCCC TCAAAACTAC ACACGTTTTG CCCTGCAGAG
AAAACAGGCA TGAAAATCAC ACATGACCAG AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG
GGAATTGACG TGCAACCTCA CAGTCAATCA ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13142
Clone ID Related Accession (Same CDS sequence) NM_001142741
Accession Version NM_001142741.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5742bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD1-10 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354404.1, AK139154.1 and AC153858.3. Transcript Variant: This variant (H) lacks three alternate in-frame exons, compared to variant A. The resulting isoform (CD1-10), also known as protocadherin-15-CD1 isoform 10, has the same N- and C-termini but lacks two internal segments, compared to isoform CD1-10. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354404.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GGTACAATTC TGGTGGATAA CATGTTGATT
AAGGGGACTG CCGGAGGACC AGACCCCACC ATAGAGCTCT CTTTAAAGGA CAACGTGGAC
TACTGGGTGT TGCTGGACCC CGTTAAACAG ATGCTTTTCC TGAACAGTAC CGGAAGAGTT
CTGGATAGAG ACCCACCAAT GAACATACAC TCCATTGTGG TGCAAGTCCA GTGTGTCAAC
AAGAAGGTTG GCACAGTTAT CTATCATGAA GTACGCATCG TGGTGCGAGA TCGGAATGAC
AACTCCCCCA CATTCAAGCA TGAAAGCTAC TATGCCACCG TGAATGAGCT CACTCCAGTT
GGCACCACGA TATTCACGGG GTTCTCGGGA GACAATGGAG CTACAGACAT AGACGATGGC
CCTAATGGAC AGATAGAATA CGTGATTCAG TACAACCCAG AAGATCCGAC ATCCAACGAC
ACCTTTGAAA TTCCACTCAT GCTGACTGGC AACGTGGTAC TGAGGAAAAG ACTCAACTAT
GAGGATAAGA CTCGCTACTA TGTCATCATC CAAGCAAATG ACCGTGCACA AAATCTGAAT
GAGAGGCGAA CAACCACCAC CACCCTCACA GTAGATGTTC TAGATGGAGA TGACCTGGGA
CCTATGTTTC TGCCTTGTGT TCTTGTGCCA AACACACGTG ACTGTCGTCC ACTCACCTAC
CAAGCTGCCA TTCCTGAACT GAGGACTCCG GAAGAACTGA ACCCTATTTT GGTGACACCA
CCTATCCAAG CCATTGATCA GGACCGAAAC ATCCAACCAC CATCTGATCG ACCTGGCATC
CTCTACTCCA TCCTTGTCGG CACCCCTGAG GATTACCCCC GCTTCTTCCA TATGCATCCC
AGGACTGCAG AACTCACTCT CCTGGAGCCA GTAAACAGAG ACTTCCATCA AAAATTTGAT
TTGGTTATTA AGGCTGAGCA GGACAATGGC CACCCACTTC CTGCCTTTGC TAGTCTGCAC
ATCGAAATAC TAGACGAAAA CAATCAGAGT CCATACTTCA CAATGCCCAG CTATCAAGGA
TACATCCTGG AATCCGCCCC AGTGGGAGCC ACCATTTCTG AGAGCCTAAA CTTAACCACT
CCTCTGAGAA TTGTAGCTCT GGACAAAGAC ATAGAAGACA CAAAAGATCC AGAGCTCCAC
CTCTTCCTGA ATGACTACAC CTCGGTCTTC ACTGTGACAC CCACTGGTAT CACCCGCTAC
CTCACCCTGC TTCAACCTGT GGACAGGGAG GAACAGCAAA CCTACACCTT TCTGATAACA
GCGTTTGATG GCGTGCAAGA AAGTGAGCCA GTCGTGGTCA ATATCCGAGT GATGGATGCA
AATGATAACA CGCCCACCTT CCCTGAAATC TCCTATGATG TCTATGTTTA CACAGACATG
AGTCCTGGGG ACAGCGTCAT TCAGCTGACA GCGGTAGATG CTGATGAAGG CTCTAATGGG
GAGATCTCCT ATGAAATACT GGTGGGGGGC AAGGGAGACT TCGTGATCAA CAAGACCACA
GGGCTGGTGA GCATTGCACC AGGCGTGGAG CTGATCGTGG GACAGACGTA TGCGCTCACA
GTGCAGGCTT CGGACAACGC CCCGCCTGCA GAAAGAAGGC ACTCCATCTG CACAGTGTAC
ATCGAGGTGC TTCCTCCTAA CAACCAGAGC CCTCCCCGCT TCCCGCAGCT GATGTACAGT
CTGGAAGTCA GCGAGGCCAT GAGGATCGGT GCTATTTTAT TAAATCTACA GGCAACTGAT
CGAGAGGGAG ATCCAATCAC ATATGCCATC GAGAATGGAG ACCCTCAGAG AGTTTTTAAT
CTTTCAGAAA CCACAGGGAT TCTCAGCCTA GGGAAGGCTC TAGACCGCGA GAGCACAGAC
CGCTACATCC TCATCGTCAC AGCCTCAGAT GGCAGACCGG ATGGAACCTC AACTGCCACT
GTGAACATAG TGGTGACGGA CGTCAATGAC AACGCTCCCG TGTTCGATCC CTATCTGCCC
AGGAACCTCT CTGTGGTGGA GGAAGAAGCC AATGCCTTTG TGGGTCAAGT CCGGGCAACA
GACCCAGATG CTGGGATAAA CGGCCAAGTT CACTACAGCC TGGGGAACTT CAACAACCTC
TTCCGCATCA CATCCAACGG GAGCATTTAC ACAGCCGTGA AGCTGAACAG GGAAGCCAGG
GACCACTATG AACTGGTTGT CGTGGCAACA GATGGAGCAG TCCACCCTCG ACATTCAACT
CTGACACTGT ACATCAAGGT GTTGGACATT GATGATAACA GTCCTGTTTT TACCAATTCA
ACGTACACAG TTGTCGTTGA AGAGAATCTG CCAGCCGGGA CCTCCTTTCT TCAAATAGAG
GCCAAGGATG TTGACCTTGG AGCCAATGTG TCATATCGGA TCAGAAGCCC AGAAGTGAAA
CACCTTTTTG CACTGCATCC ATTCACTGGA GAATTGTCTC TTCTGAGGAG TTTGGATTAT
GAGGCCTTTC CGGACCAGGA GGCAAGCATC ACATTCTTGG TGGAGGCCTT TGACATTTAT
GGGACTATGC CACCTGGTAT AGCAACAGTC ACGGTAATTG TGAAGGACAT GAATGACTAC
CCTCCAGTGT TTAGCAAACG CATCTACAAG GGGATGGTGG CTCCAGATGC AGTCAAGGGG
ACACCAATCA CCACCGTTTA TGCTGAAGAT GCGGACCCAC CTGGGATGCC TGCAAGTAGG
GTGAGGTATC GAGTGGACGA CGTGCAGTTT CCATACCCAG CCAGTATTTT TGATGTAGAG
GAAGATTCTG GAAGAGTAGT AACCCGCGTC AATCTTAATG AAGAGCCTAC TACGATTTTC
AAGCTGGTGG TTGTGGCTTT TGATGACGGC GAACCTGTGA TGTCCAGCAG TGCCACGGTG
AGAATTCTTG TCTTACATCC TGGAGAGATC CCACGCTTCA CCCAAGAGGA ATACAGACCT
CCTCCTGTAA GTGAGCTTGC GGCCAGAGGG ACTGTAGTTG GTGTCATTTC TGCTGCTGCC
ATTAATCAGA GCATCGTGTA CTCCATTGTG GCAGGAAATG AGGAAGACAA GTTTGGAATC
AACAATGTCA CTGGGGTCAT CTATGTGAAT TCACCATTGG ATTACGAGAC AAGGACCAGC
TATGTGCTCC GGGTACAAGC AGATTCTCTG GAAGTGGTCC TTGCCAATCT CCGAGTCCCT
TCAAAAAGCA ATACAGCTAA GGTGTACATT GAGATTCAGG ATGAAAACGA TCACCCCCCA
GTGTTCCAGA AGAAATTCTA CATTGGAGGT GTGTCTGAAG ACGCAAGGAT GTTCGCATCT
GTGCTCAGAG TGAAGGCCAC CGACAGGGAC ACGGGTAATT ACAGTGCCAT GGCCTACCGG
CTCATCATAC CGCCGATTAA AGAGGGCAAA GAGGGGTTTG TGGTGGAAAC ATACACAGGT
CTCATCAAGA CAGCCATGCT CTTCCACAAT ATGAGAAGAT CCTACTTCAA GTTTCAAGTG
ATTGCAACTG ACGACTACGG GAAGGGGTTG AGCGGGAAAG CAGACGTACT GGTCTCCGTG
GTCAATCAAC TGGATATGCA GGTCATTGTC TCCAATGTGC CCCCTACACT AGTGGAAAAG
AAGATAGAAG ACCTTACAGA GATTTTGGAT CGCTACGTTC AGGAGCAAAT TCCTGGTGCC
AAGGTTGTGG TGGAGTCCAT AGGTGCCCGT CGCCATGGAG ACGCCTACTC CCTAGAAGAC
TATAGCAAGT GCGACCTGAC TGTCTATGCC ATCGACCCGC AGACCAACAG AGCCATCGAC
AGAAATGAGC TTTTTAAGTT CCTGGACGGC AAACTGCTCG ATATCAATAA AGACTTCCAG
CCGTATTACG GGGAAGGAGG GCGCATTCTG GAGATTCGGA CACCTGAGGC AGTGACGAGC
ATCAAGAAGC GAGGAGAAAG CTTGGGGTAC ACAGAAGGGG CCTTGCTGGC CTTGGCCTTC
ATCATCATCC TCTGTTGCAT CCCAGCCATC TTGGTCGTCT TAGTAAGCTA CCGACAACGC
CAGGCTGAGT GCACGAAGAC CGCAAGAATT CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA
GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC CCGCCCCCGC CACCACCACC ACCAGGAGCA
CATCTCTATG AAGAACTGGG AGAGAGCGCA ATGCATAATC TTTTCCTTCT CTACCATTTT
GAACAAAGCA GGGGAAATAA CTCAGTCCCA GAAGACAGGA GCAGTCATCG CGATGGGATG
GCCTTTTCCT CCAGTACCAC TGAGTCTCAT GAGCCAGCTC ATGTAGAGGG ACCACTTAAG
GAGAGCCAGC CTAACCCAGC AAGGACGTTC TCATTTGTTC CTGATGAGGA TAACTTAAGT
ACCCATAATC CCCTTTACAT GGAAAGTATA GGTCAAAGGT CAACAAACTC AGACCTTCAG
CCACGAACAG ATTTTGAAGA GCTGTTGGCA CCCAGAACAC AAGTTAAGAG TCAGTCTCTG
AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG TGGAATCAGT CTGTGAGCTT TCCTAGGCGG
CTCATGTGGA AAGCCCCAAA CAGGCCAGAG ACCATAGACC TGGTGGAGTG GCAGATCACC
AATCAGAGAG CTGAATGCGA AAGCGCCAGA TGCCACCCAA GCCAGAGAGG TAGCAGCAAC
GTTCTGCTGG CAACTGAAGA TGCCCACGAG TCAGAGAAAG AAGGGGGACA CAGAGACACC
CTAATCGTCC AGCAAACAGA GCAGCTGAAA TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC
TCTTGGTCTC ACTTTTCTTT CTCAACTCTG CCAACGATTT CCAGAGCGGT GGAACTCGGG
TCGGAACCTA ATGTGGTCAC TTCTCCCGCT GACTGCACCT TGGAACTTTC TCCTCCTCTG
AGACCCCGTA TTTTAAACTC CTTAAGCTCT AAGAGAGAGA CTCCCACATG TGCATCAGAT
ACAGAACCAA AAAGGAACTC TTTTGAGATC GCTCCCCATC CACCTAGCAT CTCTGCTCCC
CTCCCACATC CGCCTCTTCC TAGACCTCCC ATTGCCTTTA CCACTTTTCC TCTTCCCCTT
TCTCCCCCTA ACCCTCCTCC CCCACAACTT GTTACATTTT CTCTTCCCAT TTCTACACCC
CCTACTTCTT CTCTACCTCT TCCTCCTCCA CTGTCACTTC CTCCTCCTCC TCGGCCACCA
GCTCCCCGCC TCTTCCCACA GCCTCCTTCC ACGTCCATTC CATCCACAGA CAGCATCTCT
GCACCAGCTG CTAAATGCAC TGCCAGTGCC ACACACGCCA GAGAAACCAC GTCTACGACA
CAGCCACCAG CATCCAACCC GCAGTGGGGG GCAGAACCCC ACAGACATCC AAAAGGGATC
CTCAGACATG TGAAAAACTT GGCAGAGCTC GAGAAATCAG TGTCTAACAT GTACAGTCAC
ATAGAAAAAA ACTGCCCACC TGCAGATCCC TCAAAACTAC ACACGTTTTG CCCTGCAGAG
AAAACAGGCA TGAAAATCAC ACATGACCAG AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG
GGAATTGACG TGCAACCTCA CAGTCAATCA ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136213.1
CDS422..6163
Misc Feature(1)413..415(+)
Misc Feature(2)806..1075(+)
Misc Feature(3)827..1024(+)
Misc Feature(4)1196..1522(+)
Misc Feature(5)1217..1522(+)
Misc Feature(6)1550..1870(+)
Misc Feature(7)1571..1867(+)
Misc Feature(8)1892..2182(+)
Misc Feature(9)1913..2182(+)
Misc Feature(10)2216..2494(+)
Misc Feature(11)2234..2491(+)
Misc Feature(12)2519..2800(+)
Misc Feature(13)2540..2797(+)
Misc Feature(14)2822..3118(+)
Misc Feature(15)2843..3118(+)
Misc Feature(16)3143..3436(+)
Misc Feature(17)3164..3346(+)
Misc Feature(18)3488..3775(+)
Misc Feature(19)3494..3772(+)
Misc Feature(20)3800..4084(+)
Misc Feature(21)3818..3994(+)
Misc Feature(22)4484..4546(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..673
Gene:Pcdh15
Gene Synonym:
Exon (4)674..829
Gene:Pcdh15
Gene Synonym:
Exon (5)830..949
Gene:Pcdh15
Gene Synonym:
Exon (6)950..1060
Gene:Pcdh15
Gene Synonym:
Exon (7)1061..1231
Gene:Pcdh15
Gene Synonym:
Exon (8)1232..1340
Gene:Pcdh15
Gene Synonym:
Exon (9)1341..1453
Gene:Pcdh15
Gene Synonym:
Exon (10)1454..1660
Gene:Pcdh15
Gene Synonym:
Exon (11)1661..1795
Gene:Pcdh15
Gene Synonym:
Exon (12)1796..1945
Gene:Pcdh15
Gene Synonym:
Exon (13)1946..2139
Gene:Pcdh15
Gene Synonym:
Exon (14)2140..2272
Gene:Pcdh15
Gene Synonym:
Exon (15)2273..2352
Gene:Pcdh15
Gene Synonym:
Exon (16)2353..2446
Gene:Pcdh15
Gene Synonym:
Exon (17)2447..2575
Gene:Pcdh15
Gene Synonym:
Exon (18)2576..2881
Gene:Pcdh15
Gene Synonym:
Exon (19)2882..3106
Gene:Pcdh15
Gene Synonym:
Exon (20)3107..3223
Gene:Pcdh15
Gene Synonym:
Exon (21)3224..3364
Gene:Pcdh15
Gene Synonym:
Exon (22)3365..3477
Gene:Pcdh15
Gene Synonym:
Exon (23)3478..3587
Gene:Pcdh15
Gene Synonym:
Exon (24)3588..3728
Gene:Pcdh15
Gene Synonym:
Exon (25)3729..3856
Gene:Pcdh15
Gene Synonym:
Exon (26)3857..4072
Gene:Pcdh15
Gene Synonym:
Exon (27)4073..4161
Gene:Pcdh15
Gene Synonym:
Exon (28)4162..4338
Gene:Pcdh15
Gene Synonym:
Exon (29)4339..4557
Gene:Pcdh15
Gene Synonym:
Exon (30)4558..4713
Gene:Pcdh15
Gene Synonym:
Exon (31)4714..4719
Gene:Pcdh15
Gene Synonym:
Exon (32)4720..8974
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142741
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant H, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142741

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GGTACAATTC TGGTGGATAA CATGTTGATT
AAGGGGACTG CCGGAGGACC AGACCCCACC ATAGAGCTCT CTTTAAAGGA CAACGTGGAC
TACTGGGTGT TGCTGGACCC CGTTAAACAG ATGCTTTTCC TGAACAGTAC CGGAAGAGTT
CTGGATAGAG ACCCACCAAT GAACATACAC TCCATTGTGG TGCAAGTCCA GTGTGTCAAC
AAGAAGGTTG GCACAGTTAT CTATCATGAA GTACGCATCG TGGTGCGAGA TCGGAATGAC
AACTCCCCCA CATTCAAGCA TGAAAGCTAC TATGCCACCG TGAATGAGCT CACTCCAGTT
GGCACCACGA TATTCACGGG GTTCTCGGGA GACAATGGAG CTACAGACAT AGACGATGGC
CCTAATGGAC AGATAGAATA CGTGATTCAG TACAACCCAG AAGATCCGAC ATCCAACGAC
ACCTTTGAAA TTCCACTCAT GCTGACTGGC AACGTGGTAC TGAGGAAAAG ACTCAACTAT
GAGGATAAGA CTCGCTACTA TGTCATCATC CAAGCAAATG ACCGTGCACA AAATCTGAAT
GAGAGGCGAA CAACCACCAC CACCCTCACA GTAGATGTTC TAGATGGAGA TGACCTGGGA
CCTATGTTTC TGCCTTGTGT TCTTGTGCCA AACACACGTG ACTGTCGTCC ACTCACCTAC
CAAGCTGCCA TTCCTGAACT GAGGACTCCG GAAGAACTGA ACCCTATTTT GGTGACACCA
CCTATCCAAG CCATTGATCA GGACCGAAAC ATCCAACCAC CATCTGATCG ACCTGGCATC
CTCTACTCCA TCCTTGTCGG CACCCCTGAG GATTACCCCC GCTTCTTCCA TATGCATCCC
AGGACTGCAG AACTCACTCT CCTGGAGCCA GTAAACAGAG ACTTCCATCA AAAATTTGAT
TTGGTTATTA AGGCTGAGCA GGACAATGGC CACCCACTTC CTGCCTTTGC TAGTCTGCAC
ATCGAAATAC TAGACGAAAA CAATCAGAGT CCATACTTCA CAATGCCCAG CTATCAAGGA
TACATCCTGG AATCCGCCCC AGTGGGAGCC ACCATTTCTG AGAGCCTAAA CTTAACCACT
CCTCTGAGAA TTGTAGCTCT GGACAAAGAC ATAGAAGACA CAAAAGATCC AGAGCTCCAC
CTCTTCCTGA ATGACTACAC CTCGGTCTTC ACTGTGACAC CCACTGGTAT CACCCGCTAC
CTCACCCTGC TTCAACCTGT GGACAGGGAG GAACAGCAAA CCTACACCTT TCTGATAACA
GCGTTTGATG GCGTGCAAGA AAGTGAGCCA GTCGTGGTCA ATATCCGAGT GATGGATGCA
AATGATAACA CGCCCACCTT CCCTGAAATC TCCTATGATG TCTATGTTTA CACAGACATG
AGTCCTGGGG ACAGCGTCAT TCAGCTGACA GCGGTAGATG CTGATGAAGG CTCTAATGGG
GAGATCTCCT ATGAAATACT GGTGGGGGGC AAGGGAGACT TCGTGATCAA CAAGACCACA
GGGCTGGTGA GCATTGCACC AGGCGTGGAG CTGATCGTGG GACAGACGTA TGCGCTCACA
GTGCAGGCTT CGGACAACGC CCCGCCTGCA GAAAGAAGGC ACTCCATCTG CACAGTGTAC
ATCGAGGTGC TTCCTCCTAA CAACCAGAGC CCTCCCCGCT TCCCGCAGCT GATGTACAGT
CTGGAAGTCA GCGAGGCCAT GAGGATCGGT GCTATTTTAT TAAATCTACA GGCAACTGAT
CGAGAGGGAG ATCCAATCAC ATATGCCATC GAGAATGGAG ACCCTCAGAG AGTTTTTAAT
CTTTCAGAAA CCACAGGGAT TCTCAGCCTA GGGAAGGCTC TAGACCGCGA GAGCACAGAC
CGCTACATCC TCATCGTCAC AGCCTCAGAT GGCAGACCGG ATGGAACCTC AACTGCCACT
GTGAACATAG TGGTGACGGA CGTCAATGAC AACGCTCCCG TGTTCGATCC CTATCTGCCC
AGGAACCTCT CTGTGGTGGA GGAAGAAGCC AATGCCTTTG TGGGTCAAGT CCGGGCAACA
GACCCAGATG CTGGGATAAA CGGCCAAGTT CACTACAGCC TGGGGAACTT CAACAACCTC
TTCCGCATCA CATCCAACGG GAGCATTTAC ACAGCCGTGA AGCTGAACAG GGAAGCCAGG
GACCACTATG AACTGGTTGT CGTGGCAACA GATGGAGCAG TCCACCCTCG ACATTCAACT
CTGACACTGT ACATCAAGGT GTTGGACATT GATGATAACA GTCCTGTTTT TACCAATTCA
ACGTACACAG TTGTCGTTGA AGAGAATCTG CCAGCCGGGA CCTCCTTTCT TCAAATAGAG
GCCAAGGATG TTGACCTTGG AGCCAATGTG TCATATCGGA TCAGAAGCCC AGAAGTGAAA
CACCTTTTTG CACTGCATCC ATTCACTGGA GAATTGTCTC TTCTGAGGAG TTTGGATTAT
GAGGCCTTTC CGGACCAGGA GGCAAGCATC ACATTCTTGG TGGAGGCCTT TGACATTTAT
GGGACTATGC CACCTGGTAT AGCAACAGTC ACGGTAATTG TGAAGGACAT GAATGACTAC
CCTCCAGTGT TTAGCAAACG CATCTACAAG GGGATGGTGG CTCCAGATGC AGTCAAGGGG
ACACCAATCA CCACCGTTTA TGCTGAAGAT GCGGACCCAC CTGGGATGCC TGCAAGTAGG
GTGAGGTATC GAGTGGACGA CGTGCAGTTT CCATACCCAG CCAGTATTTT TGATGTAGAG
GAAGATTCTG GAAGAGTAGT AACCCGCGTC AATCTTAATG AAGAGCCTAC TACGATTTTC
AAGCTGGTGG TTGTGGCTTT TGATGACGGC GAACCTGTGA TGTCCAGCAG TGCCACGGTG
AGAATTCTTG TCTTACATCC TGGAGAGATC CCACGCTTCA CCCAAGAGGA ATACAGACCT
CCTCCTGTAA GTGAGCTTGC GGCCAGAGGG ACTGTAGTTG GTGTCATTTC TGCTGCTGCC
ATTAATCAGA GCATCGTGTA CTCCATTGTG GCAGGAAATG AGGAAGACAA GTTTGGAATC
AACAATGTCA CTGGGGTCAT CTATGTGAAT TCACCATTGG ATTACGAGAC AAGGACCAGC
TATGTGCTCC GGGTACAAGC AGATTCTCTG GAAGTGGTCC TTGCCAATCT CCGAGTCCCT
TCAAAAAGCA ATACAGCTAA GGTGTACATT GAGATTCAGG ATGAAAACGA TCACCCCCCA
GTGTTCCAGA AGAAATTCTA CATTGGAGGT GTGTCTGAAG ACGCAAGGAT GTTCGCATCT
GTGCTCAGAG TGAAGGCCAC CGACAGGGAC ACGGGTAATT ACAGTGCCAT GGCCTACCGG
CTCATCATAC CGCCGATTAA AGAGGGCAAA GAGGGGTTTG TGGTGGAAAC ATACACAGGT
CTCATCAAGA CAGCCATGCT CTTCCACAAT ATGAGAAGAT CCTACTTCAA GTTTCAAGTG
ATTGCAACTG ACGACTACGG GAAGGGGTTG AGCGGGAAAG CAGACGTACT GGTCTCCGTG
GTCAATCAAC TGGATATGCA GGTCATTGTC TCCAATGTGC CCCCTACACT AGTGGAAAAG
AAGATAGAAG ACCTTACAGA GATTTTGGAT CGCTACGTTC AGGAGCAAAT TCCTGGTGCC
AAGGTTGTGG TGGAGTCCAT AGGTGCCCGT CGCCATGGAG ACGCCTACTC CCTAGAAGAC
TATAGCAAGT GCGACCTGAC TGTCTATGCC ATCGACCCGC AGACCAACAG AGCCATCGAC
AGAAATGAGC TTTTTAAGTT CCTGGACGGC AAACTGCTCG ATATCAATAA AGACTTCCAG
CCGTATTACG GGGAAGGAGG GCGCATTCTG GAGATTCGGA CACCTGAGGC AGTGACGAGC
ATCAAGAAGC GAGGAGAAAG CTTGGGGTAC ACAGAAGGGG CCTTGCTGGC CTTGGCCTTC
ATCATCATCC TCTGTTGCAT CCCAGCCATC TTGGTCGTCT TAGTAAGCTA CCGACAACGC
CAGGCTGAGT GCACGAAGAC CGCAAGAATT CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA
GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC CCGCCCCCGC CACCACCACC ACCAGGAGCA
CATCTCTATG AAGAACTGGG AGAGAGCGCA ATGCATAATC TTTTCCTTCT CTACCATTTT
GAACAAAGCA GGGGAAATAA CTCAGTCCCA GAAGACAGGA GCAGTCATCG CGATGGGATG
GCCTTTTCCT CCAGTACCAC TGAGTCTCAT GAGCCAGCTC ATGTAGAGGG ACCACTTAAG
GAGAGCCAGC CTAACCCAGC AAGGACGTTC TCATTTGTTC CTGATGAGGA TAACTTAAGT
ACCCATAATC CCCTTTACAT GGAAAGTATA GGTCAAAGGT CAACAAACTC AGACCTTCAG
CCACGAACAG ATTTTGAAGA GCTGTTGGCA CCCAGAACAC AAGTTAAGAG TCAGTCTCTG
AGGGGCCCAA GAGAAAAGAT CCAGAGGGTG TGGAATCAGT CTGTGAGCTT TCCTAGGCGG
CTCATGTGGA AAGCCCCAAA CAGGCCAGAG ACCATAGACC TGGTGGAGTG GCAGATCACC
AATCAGAGAG CTGAATGCGA AAGCGCCAGA TGCCACCCAA GCCAGAGAGG TAGCAGCAAC
GTTCTGCTGG CAACTGAAGA TGCCCACGAG TCAGAGAAAG AAGGGGGACA CAGAGACACC
CTAATCGTCC AGCAAACAGA GCAGCTGAAA TCTCTGTCTT CTGGCTCTTC TTTTTCCTCC
TCTTGGTCTC ACTTTTCTTT CTCAACTCTG CCAACGATTT CCAGAGCGGT GGAACTCGGG
TCGGAACCTA ATGTGGTCAC TTCTCCCGCT GACTGCACCT TGGAACTTTC TCCTCCTCTG
AGACCCCGTA TTTTAAACTC CTTAAGCTCT AAGAGAGAGA CTCCCACATG TGCATCAGAT
ACAGAACCAA AAAGGAACTC TTTTGAGATC GCTCCCCATC CACCTAGCAT CTCTGCTCCC
CTCCCACATC CGCCTCTTCC TAGACCTCCC ATTGCCTTTA CCACTTTTCC TCTTCCCCTT
TCTCCCCCTA ACCCTCCTCC CCCACAACTT GTTACATTTT CTCTTCCCAT TTCTACACCC
CCTACTTCTT CTCTACCTCT TCCTCCTCCA CTGTCACTTC CTCCTCCTCC TCGGCCACCA
GCTCCCCGCC TCTTCCCACA GCCTCCTTCC ACGTCCATTC CATCCACAGA CAGCATCTCT
GCACCAGCTG CTAAATGCAC TGCCAGTGCC ACACACGCCA GAGAAACCAC GTCTACGACA
CAGCCACCAG CATCCAACCC GCAGTGGGGG GCAGAACCCC ACAGACATCC AAAAGGGATC
CTCAGACATG TGAAAAACTT GGCAGAGCTC GAGAAATCAG TGTCTAACAT GTACAGTCAC
ATAGAAAAAA ACTGCCCACC TGCAGATCCC TCAAAACTAC ACACGTTTTG CCCTGCAGAG
AAAACAGGCA TGAAAATCAC ACATGACCAG AGCCAGGAAA CGTTGGTTAG AGTTGTTGAG
GGAATTGACG TGCAACCTCA CAGTCAATCA ACATCTTTGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13240
Clone ID Related Accession (Same CDS sequence) NM_001142742
Accession Version NM_001142742.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5373bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD2-1 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354405.1 and AK139154.1. Transcript Variant: This variant (I) includes an alternate in-frame exon in the central coding region and has a distinct 3' splice pattern, compared to variant A. The resulting isoform (CD2-1), also known as protocadherin-15-CD2 isoform 1, includes an alternate 7-aa segment in the central coding region and has a distinct and longer C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354405.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
GTGCCACCTG GTGGAGTTCC TACAAAAGAT CCAGAGCTCC ACCTCTTCCT GAATGACTAC
ACCTCGGTCT TCACTGTGAC ACCCACTGGT ATCACCCGCT ACCTCACCCT GCTTCAACCT
GTGGACAGGG AGGAACAGCA AACCTACACC TTTCTGATAA CAGCGTTTGA TGGCGTGCAA
GAAAGTGAGC CAGTCGTGGT CAATATCCGA GTGATGGATG CAAATGATAA CACGCCCACC
TTCCCTGAAA TCTCCTATGA TGTCTATGTT TACACAGACA TGAGTCCTGG GGACAGCGTC
ATTCAGCTGA CAGCGGTAGA TGCTGATGAA GGCTCTAATG GGGAGATCTC CTATGAAATA
CTGGTGGGGG GCAAGGGAGA CTTCGTGATC AACAAGACCA CAGGGCTGGT GAGCATTGCA
CCAGGCGTGG AGCTGATCGT GGGACAGACG TATGCGCTCA CAGTGCAGGC TTCGGACAAC
GCCCCGCCTG CAGAAAGAAG GCACTCCATC TGCACAGTGT ACATCGAGGT GCTTCCTCCT
AACAACCAGA GCCCTCCCCG CTTCCCGCAG CTGATGTACA GTCTGGAAGT CAGCGAGGCC
ATGAGGATCG GTGCTATTTT ATTAAATCTA CAGGCAACTG ATCGAGAGGG AGATCCAATC
ACATATGCCA TCGAGAATGG AGACCCTCAG AGAGTTTTTA ATCTTTCAGA AACCACAGGG
ATTCTCAGCC TAGGGAAGGC TCTAGACCGC GAGAGCACAG ACCGCTACAT CCTCATCGTC
ACAGCCTCAG ATGGCAGACC GGATGGAACC TCAACTGCCA CTGTGAACAT AGTGGTGACG
GACGTCAATG ACAACGCTCC CGTGTTCGAT CCCTATCTGC CCAGGAACCT CTCTGTGGTG
GAGGAAGAAG CCAATGCCTT TGTGGGTCAA GTCCGGGCAA CAGACCCAGA TGCTGGGATA
AACGGCCAAG TTCACTACAG CCTGGGGAAC TTCAACAACC TCTTCCGCAT CACATCCAAC
GGGAGCATTT ACACAGCCGT GAAGCTGAAC AGGGAAGCCA GGGACCACTA TGAACTGGTT
GTCGTGGCAA CAGATGGAGC AGTCCACCCT CGACATTCAA CTCTGACACT GTACATCAAG
GTGTTGGACA TTGATGATAA CAGTCCTGTT TTTACCAATT CAACGTACAC AGTTGTCGTT
GAAGAGAATC TGCCAGCCGG GACCTCCTTT CTTCAAATAG AGGCCAAGGA TGTTGACCTT
GGAGCCAATG TGTCATATCG GATCAGAAGC CCAGAAGTGA AACACCTTTT TGCACTGCAT
CCATTCACTG GAGAATTGTC TCTTCTGAGG AGTTTGGATT ATGAGGCCTT TCCGGACCAG
GAGGCAAGCA TCACATTCTT GGTGGAGGCC TTTGACATTT ATGGGACTAT GCCACCTGGT
ATAGCAACAG TCACGGTAAT TGTGAAGGAC ATGAATGACT ACCCTCCAGT GTTTAGCAAA
CGCATCTACA AGGGGATGGT GGCTCCAGAT GCAGTCAAGG GGACACCAAT CACCACCGTT
TATGCTGAAG ATGCGGACCC ACCTGGGATG CCTGCAAGTA GGGTGAGGTA TCGAGTGGAC
GACGTGCAGT TTCCATACCC AGCCAGTATT TTTGATGTAG AGGAAGATTC TGGAAGAGTA
GTAACCCGCG TCAATCTTAA TGAAGAGCCT ACTACGATTT TCAAGCTGGT GGTTGTGGCT
TTTGATGACG GCGAACCTGT GATGTCCAGC AGTGCCACGG TGAGAATTCT TGTCTTACAT
CCTGGAGAGA TCCCACGCTT CACCCAAGAG GAATACAGAC CTCCTCCTGT AAGTGAGCTT
GCGGCCAGAG GGACTGTAGT TGGTGTCATT TCTGCTGCTG CCATTAATCA GAGCATCGTG
TACTCCATTG TGGCAGGAAA TGAGGAAGAC AAGTTTGGAA TCAACAATGT CACTGGGGTC
ATCTATGTGA ATTCACCATT GGATTACGAG ACAAGGACCA GCTATGTGCT CCGGGTACAA
GCAGATTCTC TGGAAGTGGT CCTTGCCAAT CTCCGAGTCC CTTCAAAAAG CAATACAGCT
AAGGTGTACA TTGAGATTCA GGATGAAAAC GATCACCCCC CAGTGTTCCA GAAGAAATTC
TACATTGGAG GTGTGTCTGA AGACGCAAGG ATGTTCGCAT CTGTGCTCAG AGTGAAGGCC
ACCGACAGGG ACACGGGTAA TTACAGTGCC ATGGCCTACC GGCTCATCAT ACCGCCGATT
AAAGAGGGCA AAGAGGGGTT TGTGGTGGAA ACATACACAG GTCTCATCAA GACAGCCATG
CTCTTCCACA ATATGAGAAG ATCCTACTTC AAGTTTCAAG TGATTGCAAC TGACGACTAC
GGGAAGGGGT TGAGCGGGAA AGCAGACGTA CTGGTCTCCG TGGTCAATCA ACTGGATATG
CAGGTCATTG TCTCCAATGT GCCCCCTACA CTAGTGGAAA AGAAGATAGA AGACCTTACA
GAGATTTTGG ATCGCTACGT TCAGGAGCAA ATTCCTGGTG CCAAGGTTGT GGTGGAGTCC
ATAGGTGCCC GTCGCCATGG AGACGCCTAC TCCCTAGAAG ACTATAGCAA GTGCGACCTG
ACTGTCTATG CCATCGACCC GCAGACCAAC AGAGCCATCG ACAGAAATGA GCTTTTTAAG
TTCCTGGACG GCAAACTGCT CGATATCAAT AAAGACTTCC AGCCGTATTA CGGGGAAGGA
GGGCGCATTC TGGAGATTCG GACACCTGAG GCAGTGACGA GCATCAAGAA GCGAGGAGAA
AGCTTGGGGT ACACAGAAGG GGCCTTGCTG GCCTTGGCCT TCATCATCAT CCTCTGTTGC
ATCCCAGCCA TCTTGGTCGT CTTAGTAAGC TACCGACAGT TTAAAGTACG CCAGGCTGAG
TGCACGAAGA CCGCAAGAAT TCAGTCTGCT ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA
CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG CCACCACCAC CACCAGGAGC ACATCTCTAT
GAAGAACTGG GAGAGAGCGC AATGCATAAG TATGAGATGC CCCAGTATGG AAGTCGCCGT
CGACTGCTGC CACCTGCTGG ACAGGAGGAA TACGGCGAAG TCATTGGTGA AGCTGAAGAG
GAATATGAAG AAGAAGAGGT AGAGCCAGAG AAAGTTAAAA AACCCAAAGT TGAAATTAGA
GAGCCTAGTG AGGAGGAGGT GGTAGTCACC GTTGAGAAGC CACCAGCGGC TGAGCCCACA
TACCCAACGT GGAAGAGAGC CAGGATATTC CCGATGATTT TTAAGAAAGT CAGAGGTCTC
GCTGAGAAAA GAGGCATTGA CCTTGAGGGC GAGGAGTGGA GGAGGCGCCT TGATGAAGAA
GACAAAGACT ATCTTCAACT GACTCTAGAC CAGGAGGAAG CTACCGAAAG CACCGTGGAG
TCAGAGGAGG AGTCCAGCGA CTACACAGAA TACACAGAAA CGGAGTCCGA GTTCAGCGAG
TCCGAGACAA CTGAAGAATC AGAGTCGGAG ACCCCATCTG AGGAAGCGGA GGAGAGCTCT
ACCCCGGAGT CAGAGGAGTC TGAGTCCACT GAGTCAGAGG GAGAGAAAGC AAGAAAAAAC
ATCGTGCTAG CTAGAAGAAG GCCTGTGGTC GAGGAAATCC AGGAGGTGAA AGGTAAGAGA
GAGGAGCCCC CGGTGGAAGA GGAAGAAGAG CCCCCACTAG AGGAGGAAGA ACGGGCAGAG
GAAGGAGAAG AAAGCGAAGC AGCTCCCATG GATGAGTCCA CAGACCTGGA GGCTCAGGAT
GTCCCAGAGG AGGGCAGTGC AGAATCAGTC TCCATGGAGA GGGGCGTGGA AAGTGAGGAG
TCAGAGTCAG AACTGAGCAG CAGCAGCAGT ACCAGTGAGA GTCTCTCCGG AGGCCCCTGG
GGCTTTCAGG TGCCAGAATA TGACAGAAGG AAGGATGAAG AGCCCAAGAA ATCTCCAGGC
GCAAACTCCG AAGGTTACAA CACAGCCCTT TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136214.1
CDS422..5794
Misc Feature(1)413..415(+)
Misc Feature(2)887..1156(+)
Misc Feature(3)908..1105(+)
Misc Feature(4)1277..1603(+)
Misc Feature(5)1298..1603(+)
Misc Feature(6)1631..1972(+)
Misc Feature(7)1652..1969(+)
Misc Feature(8)1994..2284(+)
Misc Feature(9)2015..2284(+)
Misc Feature(10)2318..2596(+)
Misc Feature(11)2336..2593(+)
Misc Feature(12)2621..2902(+)
Misc Feature(13)2642..2899(+)
Misc Feature(14)2924..3220(+)
Misc Feature(15)2945..3220(+)
Misc Feature(16)3245..3538(+)
Misc Feature(17)3266..3448(+)
Misc Feature(18)3590..3877(+)
Misc Feature(19)3596..3874(+)
Misc Feature(20)3902..4186(+)
Misc Feature(21)3920..4096(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..527
Gene:Pcdh15
Gene Synonym:
Exon (4)528..593
Gene:Pcdh15
Gene Synonym:
Exon (5)594..754
Gene:Pcdh15
Gene Synonym:
Exon (6)755..910
Gene:Pcdh15
Gene Synonym:
Exon (7)911..1030
Gene:Pcdh15
Gene Synonym:
Exon (8)1031..1141
Gene:Pcdh15
Gene Synonym:
Exon (9)1142..1312
Gene:Pcdh15
Gene Synonym:
Exon (10)1313..1421
Gene:Pcdh15
Gene Synonym:
Exon (11)1422..1534
Gene:Pcdh15
Gene Synonym:
Exon (12)1535..1741
Gene:Pcdh15
Gene Synonym:
Exon (13)1742..1762
Gene:Pcdh15
Gene Synonym:
Exon (14)1763..1897
Gene:Pcdh15
Gene Synonym:
Exon (15)1898..2047
Gene:Pcdh15
Gene Synonym:
Exon (16)2048..2241
Gene:Pcdh15
Gene Synonym:
Exon (17)2242..2374
Gene:Pcdh15
Gene Synonym:
Exon (18)2375..2454
Gene:Pcdh15
Gene Synonym:
Exon (19)2455..2548
Gene:Pcdh15
Gene Synonym:
Exon (20)2549..2677
Gene:Pcdh15
Gene Synonym:
Exon (21)2678..2983
Gene:Pcdh15
Gene Synonym:
Exon (22)2984..3208
Gene:Pcdh15
Gene Synonym:
Exon (23)3209..3325
Gene:Pcdh15
Gene Synonym:
Exon (24)3326..3466
Gene:Pcdh15
Gene Synonym:
Exon (25)3467..3579
Gene:Pcdh15
Gene Synonym:
Exon (26)3580..3689
Gene:Pcdh15
Gene Synonym:
Exon (27)3690..3830
Gene:Pcdh15
Gene Synonym:
Exon (28)3831..3958
Gene:Pcdh15
Gene Synonym:
Exon (29)3959..4174
Gene:Pcdh15
Gene Synonym:
Exon (30)4175..4263
Gene:Pcdh15
Gene Synonym:
Exon (31)4264..4440
Gene:Pcdh15
Gene Synonym:
Exon (32)4441..4659
Gene:Pcdh15
Gene Synonym:
Exon (33)4660..4668
Gene:Pcdh15
Gene Synonym:
Exon (34)4669..4824
Gene:Pcdh15
Gene Synonym:
Exon (35)4825..4830
Gene:Pcdh15
Gene Synonym:
Exon (36)4831..4939
Gene:Pcdh15
Gene Synonym:
Exon (37)4940..6303
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142742
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant I, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142742

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
GTGCCACCTG GTGGAGTTCC TACAAAAGAT CCAGAGCTCC ACCTCTTCCT GAATGACTAC
ACCTCGGTCT TCACTGTGAC ACCCACTGGT ATCACCCGCT ACCTCACCCT GCTTCAACCT
GTGGACAGGG AGGAACAGCA AACCTACACC TTTCTGATAA CAGCGTTTGA TGGCGTGCAA
GAAAGTGAGC CAGTCGTGGT CAATATCCGA GTGATGGATG CAAATGATAA CACGCCCACC
TTCCCTGAAA TCTCCTATGA TGTCTATGTT TACACAGACA TGAGTCCTGG GGACAGCGTC
ATTCAGCTGA CAGCGGTAGA TGCTGATGAA GGCTCTAATG GGGAGATCTC CTATGAAATA
CTGGTGGGGG GCAAGGGAGA CTTCGTGATC AACAAGACCA CAGGGCTGGT GAGCATTGCA
CCAGGCGTGG AGCTGATCGT GGGACAGACG TATGCGCTCA CAGTGCAGGC TTCGGACAAC
GCCCCGCCTG CAGAAAGAAG GCACTCCATC TGCACAGTGT ACATCGAGGT GCTTCCTCCT
AACAACCAGA GCCCTCCCCG CTTCCCGCAG CTGATGTACA GTCTGGAAGT CAGCGAGGCC
ATGAGGATCG GTGCTATTTT ATTAAATCTA CAGGCAACTG ATCGAGAGGG AGATCCAATC
ACATATGCCA TCGAGAATGG AGACCCTCAG AGAGTTTTTA ATCTTTCAGA AACCACAGGG
ATTCTCAGCC TAGGGAAGGC TCTAGACCGC GAGAGCACAG ACCGCTACAT CCTCATCGTC
ACAGCCTCAG ATGGCAGACC GGATGGAACC TCAACTGCCA CTGTGAACAT AGTGGTGACG
GACGTCAATG ACAACGCTCC CGTGTTCGAT CCCTATCTGC CCAGGAACCT CTCTGTGGTG
GAGGAAGAAG CCAATGCCTT TGTGGGTCAA GTCCGGGCAA CAGACCCAGA TGCTGGGATA
AACGGCCAAG TTCACTACAG CCTGGGGAAC TTCAACAACC TCTTCCGCAT CACATCCAAC
GGGAGCATTT ACACAGCCGT GAAGCTGAAC AGGGAAGCCA GGGACCACTA TGAACTGGTT
GTCGTGGCAA CAGATGGAGC AGTCCACCCT CGACATTCAA CTCTGACACT GTACATCAAG
GTGTTGGACA TTGATGATAA CAGTCCTGTT TTTACCAATT CAACGTACAC AGTTGTCGTT
GAAGAGAATC TGCCAGCCGG GACCTCCTTT CTTCAAATAG AGGCCAAGGA TGTTGACCTT
GGAGCCAATG TGTCATATCG GATCAGAAGC CCAGAAGTGA AACACCTTTT TGCACTGCAT
CCATTCACTG GAGAATTGTC TCTTCTGAGG AGTTTGGATT ATGAGGCCTT TCCGGACCAG
GAGGCAAGCA TCACATTCTT GGTGGAGGCC TTTGACATTT ATGGGACTAT GCCACCTGGT
ATAGCAACAG TCACGGTAAT TGTGAAGGAC ATGAATGACT ACCCTCCAGT GTTTAGCAAA
CGCATCTACA AGGGGATGGT GGCTCCAGAT GCAGTCAAGG GGACACCAAT CACCACCGTT
TATGCTGAAG ATGCGGACCC ACCTGGGATG CCTGCAAGTA GGGTGAGGTA TCGAGTGGAC
GACGTGCAGT TTCCATACCC AGCCAGTATT TTTGATGTAG AGGAAGATTC TGGAAGAGTA
GTAACCCGCG TCAATCTTAA TGAAGAGCCT ACTACGATTT TCAAGCTGGT GGTTGTGGCT
TTTGATGACG GCGAACCTGT GATGTCCAGC AGTGCCACGG TGAGAATTCT TGTCTTACAT
CCTGGAGAGA TCCCACGCTT CACCCAAGAG GAATACAGAC CTCCTCCTGT AAGTGAGCTT
GCGGCCAGAG GGACTGTAGT TGGTGTCATT TCTGCTGCTG CCATTAATCA GAGCATCGTG
TACTCCATTG TGGCAGGAAA TGAGGAAGAC AAGTTTGGAA TCAACAATGT CACTGGGGTC
ATCTATGTGA ATTCACCATT GGATTACGAG ACAAGGACCA GCTATGTGCT CCGGGTACAA
GCAGATTCTC TGGAAGTGGT CCTTGCCAAT CTCCGAGTCC CTTCAAAAAG CAATACAGCT
AAGGTGTACA TTGAGATTCA GGATGAAAAC GATCACCCCC CAGTGTTCCA GAAGAAATTC
TACATTGGAG GTGTGTCTGA AGACGCAAGG ATGTTCGCAT CTGTGCTCAG AGTGAAGGCC
ACCGACAGGG ACACGGGTAA TTACAGTGCC ATGGCCTACC GGCTCATCAT ACCGCCGATT
AAAGAGGGCA AAGAGGGGTT TGTGGTGGAA ACATACACAG GTCTCATCAA GACAGCCATG
CTCTTCCACA ATATGAGAAG ATCCTACTTC AAGTTTCAAG TGATTGCAAC TGACGACTAC
GGGAAGGGGT TGAGCGGGAA AGCAGACGTA CTGGTCTCCG TGGTCAATCA ACTGGATATG
CAGGTCATTG TCTCCAATGT GCCCCCTACA CTAGTGGAAA AGAAGATAGA AGACCTTACA
GAGATTTTGG ATCGCTACGT TCAGGAGCAA ATTCCTGGTG CCAAGGTTGT GGTGGAGTCC
ATAGGTGCCC GTCGCCATGG AGACGCCTAC TCCCTAGAAG ACTATAGCAA GTGCGACCTG
ACTGTCTATG CCATCGACCC GCAGACCAAC AGAGCCATCG ACAGAAATGA GCTTTTTAAG
TTCCTGGACG GCAAACTGCT CGATATCAAT AAAGACTTCC AGCCGTATTA CGGGGAAGGA
GGGCGCATTC TGGAGATTCG GACACCTGAG GCAGTGACGA GCATCAAGAA GCGAGGAGAA
AGCTTGGGGT ACACAGAAGG GGCCTTGCTG GCCTTGGCCT TCATCATCAT CCTCTGTTGC
ATCCCAGCCA TCTTGGTCGT CTTAGTAAGC TACCGACAGT TTAAAGTACG CCAGGCTGAG
TGCACGAAGA CCGCAAGAAT TCAGTCTGCT ATGCCTGCAG CCAAGCCTGC AGCTCCTGTA
CCAGCTGCGC CTGCGCCGCC CCCGCCCCCG CCACCACCAC CACCAGGAGC ACATCTCTAT
GAAGAACTGG GAGAGAGCGC AATGCATAAG TATGAGATGC CCCAGTATGG AAGTCGCCGT
CGACTGCTGC CACCTGCTGG ACAGGAGGAA TACGGCGAAG TCATTGGTGA AGCTGAAGAG
GAATATGAAG AAGAAGAGGT AGAGCCAGAG AAAGTTAAAA AACCCAAAGT TGAAATTAGA
GAGCCTAGTG AGGAGGAGGT GGTAGTCACC GTTGAGAAGC CACCAGCGGC TGAGCCCACA
TACCCAACGT GGAAGAGAGC CAGGATATTC CCGATGATTT TTAAGAAAGT CAGAGGTCTC
GCTGAGAAAA GAGGCATTGA CCTTGAGGGC GAGGAGTGGA GGAGGCGCCT TGATGAAGAA
GACAAAGACT ATCTTCAACT GACTCTAGAC CAGGAGGAAG CTACCGAAAG CACCGTGGAG
TCAGAGGAGG AGTCCAGCGA CTACACAGAA TACACAGAAA CGGAGTCCGA GTTCAGCGAG
TCCGAGACAA CTGAAGAATC AGAGTCGGAG ACCCCATCTG AGGAAGCGGA GGAGAGCTCT
ACCCCGGAGT CAGAGGAGTC TGAGTCCACT GAGTCAGAGG GAGAGAAAGC AAGAAAAAAC
ATCGTGCTAG CTAGAAGAAG GCCTGTGGTC GAGGAAATCC AGGAGGTGAA AGGTAAGAGA
GAGGAGCCCC CGGTGGAAGA GGAAGAAGAG CCCCCACTAG AGGAGGAAGA ACGGGCAGAG
GAAGGAGAAG AAAGCGAAGC AGCTCCCATG GATGAGTCCA CAGACCTGGA GGCTCAGGAT
GTCCCAGAGG AGGGCAGTGC AGAATCAGTC TCCATGGAGA GGGGCGTGGA AAGTGAGGAG
TCAGAGTCAG AACTGAGCAG CAGCAGCAGT ACCAGTGAGA GTCTCTCCGG AGGCCCCTGG
GGCTTTCAGG TGCCAGAATA TGACAGAAGG AAGGATGAAG AGCCCAAGAA ATCTCCAGGC
GCAAACTCCG AAGGTTACAA CACAGCCCTT TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13214
Clone ID Related Accession (Same CDS sequence) NM_001142743
Accession Version NM_001142743.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 4557bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD2-2 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354406.1 and AK139154.1. Transcript Variant: This variant (J) lacks an alternate in-frame exon in the 5' coding region and has a distinct 3' splice pattern, compared to variant A. The resulting isoform (CD2-2), also known as protocadherin-15-CD2 isoform 2, lacks a 5-aa segment in the 5' coding region and has a distinct and longer C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354406.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAAGAGTTAT
CCATGGAATC TGGGATTGAT CCTGGCCAGG AATATGGACA AGATTATTAC AGTTATGAGC
ATGGGTATGA GATGCCCCAG TATGGAAGTC GCCGTCGACT GCTGCCACCT GCTGGACAGG
AGGAATACGG CGAAGTCATT GGTGAAGCTG AAGAGGAATA TGAAGAAGAA GAGGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136215.1
CDS422..4978
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..3841(+)
Misc Feature(19)3560..3838(+)
Misc Feature(20)3866..4150(+)
Misc Feature(21)3884..4060(+)
Misc Feature(22)4550..4612(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..3922
Gene:Pcdh15
Gene Synonym:
Exon (27)3923..4138
Gene:Pcdh15
Gene Synonym:
Exon (28)4139..4227
Gene:Pcdh15
Gene Synonym:
Exon (29)4228..4404
Gene:Pcdh15
Gene Synonym:
Exon (30)4405..4623
Gene:Pcdh15
Gene Synonym:
Exon (31)4624..4632
Gene:Pcdh15
Gene Synonym:
Exon (32)4633..4788
Gene:Pcdh15
Gene Synonym:
Exon (33)4789..4794
Gene:Pcdh15
Gene Synonym:
Exon (34)4795..4865
Gene:Pcdh15
Gene Synonym:
Exon (35)4866..4974
Gene:Pcdh15
Gene Synonym:
Exon (36)4975..6338
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142743
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant J, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142743

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAAGAGTTAT
CCATGGAATC TGGGATTGAT CCTGGCCAGG AATATGGACA AGATTATTAC AGTTATGAGC
ATGGGTATGA GATGCCCCAG TATGGAAGTC GCCGTCGACT GCTGCCACCT GCTGGACAGG
AGGAATACGG CGAAGTCATT GGTGAAGCTG AAGAGGAATA TGAAGAAGAA GAGGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13141
Clone ID Related Accession (Same CDS sequence) NM_001142746
Accession Version NM_001142746.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5049bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD3-1 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354413.1, AK139154.1, AC153858.3 and CO433511.1. Transcript Variant: This variant (K) has a distinct 3' splice pattern, compared to variant A. The resulting isoform (CD3-1), also known as protocadherin-15-CD3 isoform 1, has a distinct and longer C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354413.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAAGT ATGAGATGCC CCAGTATGGA AGTCGCCGTC GACTGCTGCC ACCTGCTGGA
CAGGAGGAAT ACGGCGAAGT CATTGGTGAA GCTGAAGAGG AATATGAAGA AGAAGAGTGG
GCAAGAAAAA GAATGATCAA GTTGGTGGTC GATCGGGAGT ATGAGAGCAG CTCACCTGGG
GAAGACAGCG CTCCTGAGTC GCAGAGAAGC AGAACTCACA AGCCCAGTGG CCGCAGCAAT
GTCAACGGCA ACATCTACAT TGCGCAGAAT GGTTCCGTGG TGAGAACACG CCGTGCCTGC
GTCGCTGATA ACTTGAAGGT GCCCTCCCCT GGGTTGCTTG GGAGGCATCT GAAGAAATTA
GACACATTGG CAGGGACACG TGAAGAGAAT GTGCCCCTGA ACACACTGTT CAAGGGGCCA
TTTTCCACAG AGAAAGCGAA AAGAACCCCA ACTCTGGTCA CGTTTGCCCC GTGCCCCGTG
GTGGCTGAGC ACTCGGCAGT GAAGCCATCA GGGACCAGGC TGAAACACAC AGCTGAGCAG
GAGTCCATGG TAGACAGTAG GCTCTCCAGA GAGTCGATGG AATTCCACGG TGACAGCGCG
CCATCAGATG AGGAGGAGCT CTGGATGGGT CCGTGGAACA GCCTCCACAT ACCAATGACA
AAACTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136218.1
CDS422..5470
Misc Feature(1)413..415(+)
Misc Feature(2)887..1156(+)
Misc Feature(3)908..1105(+)
Misc Feature(4)1277..1603(+)
Misc Feature(5)1298..1603(+)
Misc Feature(6)1631..1951(+)
Misc Feature(7)1652..1948(+)
Misc Feature(8)1973..2263(+)
Misc Feature(9)1994..2263(+)
Misc Feature(10)2297..2575(+)
Misc Feature(11)2315..2572(+)
Misc Feature(12)2600..2881(+)
Misc Feature(13)2621..2878(+)
Misc Feature(14)2903..3199(+)
Misc Feature(15)2924..3199(+)
Misc Feature(16)3224..3517(+)
Misc Feature(17)3245..3427(+)
Misc Feature(18)3569..3856(+)
Misc Feature(19)3575..3853(+)
Misc Feature(20)3881..4165(+)
Misc Feature(21)3899..4075(+)
Misc Feature(22)4565..4627(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..527
Gene:Pcdh15
Gene Synonym:
Exon (4)528..593
Gene:Pcdh15
Gene Synonym:
Exon (5)594..754
Gene:Pcdh15
Gene Synonym:
Exon (6)755..910
Gene:Pcdh15
Gene Synonym:
Exon (7)911..1030
Gene:Pcdh15
Gene Synonym:
Exon (8)1031..1141
Gene:Pcdh15
Gene Synonym:
Exon (9)1142..1312
Gene:Pcdh15
Gene Synonym:
Exon (10)1313..1421
Gene:Pcdh15
Gene Synonym:
Exon (11)1422..1534
Gene:Pcdh15
Gene Synonym:
Exon (12)1535..1741
Gene:Pcdh15
Gene Synonym:
Exon (13)1742..1876
Gene:Pcdh15
Gene Synonym:
Exon (14)1877..2026
Gene:Pcdh15
Gene Synonym:
Exon (15)2027..2220
Gene:Pcdh15
Gene Synonym:
Exon (16)2221..2353
Gene:Pcdh15
Gene Synonym:
Exon (17)2354..2433
Gene:Pcdh15
Gene Synonym:
Exon (18)2434..2527
Gene:Pcdh15
Gene Synonym:
Exon (19)2528..2656
Gene:Pcdh15
Gene Synonym:
Exon (20)2657..2962
Gene:Pcdh15
Gene Synonym:
Exon (21)2963..3187
Gene:Pcdh15
Gene Synonym:
Exon (22)3188..3304
Gene:Pcdh15
Gene Synonym:
Exon (23)3305..3445
Gene:Pcdh15
Gene Synonym:
Exon (24)3446..3558
Gene:Pcdh15
Gene Synonym:
Exon (25)3559..3668
Gene:Pcdh15
Gene Synonym:
Exon (26)3669..3809
Gene:Pcdh15
Gene Synonym:
Exon (27)3810..3937
Gene:Pcdh15
Gene Synonym:
Exon (28)3938..4153
Gene:Pcdh15
Gene Synonym:
Exon (29)4154..4242
Gene:Pcdh15
Gene Synonym:
Exon (30)4243..4419
Gene:Pcdh15
Gene Synonym:
Exon (31)4420..4638
Gene:Pcdh15
Gene Synonym:
Exon (32)4639..4647
Gene:Pcdh15
Gene Synonym:
Exon (33)4648..4803
Gene:Pcdh15
Gene Synonym:
Exon (34)4804..4809
Gene:Pcdh15
Gene Synonym:
Exon (35)4810..4918
Gene:Pcdh15
Gene Synonym:
Exon (36)4919..9135
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142746
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant K, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142746

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGC AATACAGCTA AGGTGTACAT TGAGATTCAG
GATGAAAACG ATCACCCCCC AGTGTTCCAG AAGAAATTCT ACATTGGAGG TGTGTCTGAA
GACGCAAGGA TGTTCGCATC TGTGCTCAGA GTGAAGGCCA CCGACAGGGA CACGGGTAAT
TACAGTGCCA TGGCCTACCG GCTCATCATA CCGCCGATTA AAGAGGGCAA AGAGGGGTTT
GTGGTGGAAA CATACACAGG TCTCATCAAG ACAGCCATGC TCTTCCACAA TATGAGAAGA
TCCTACTTCA AGTTTCAAGT GATTGCAACT GACGACTACG GGAAGGGGTT GAGCGGGAAA
GCAGACGTAC TGGTCTCCGT GGTCAATCAA CTGGATATGC AGGTCATTGT CTCCAATGTG
CCCCCTACAC TAGTGGAAAA GAAGATAGAA GACCTTACAG AGATTTTGGA TCGCTACGTT
CAGGAGCAAA TTCCTGGTGC CAAGGTTGTG GTGGAGTCCA TAGGTGCCCG TCGCCATGGA
GACGCCTACT CCCTAGAAGA CTATAGCAAG TGCGACCTGA CTGTCTATGC CATCGACCCG
CAGACCAACA GAGCCATCGA CAGAAATGAG CTTTTTAAGT TCCTGGACGG CAAACTGCTC
GATATCAATA AAGACTTCCA GCCGTATTAC GGGGAAGGAG GGCGCATTCT GGAGATTCGG
ACACCTGAGG CAGTGACGAG CATCAAGAAG CGAGGAGAAA GCTTGGGGTA CACAGAAGGG
GCCTTGCTGG CCTTGGCCTT CATCATCATC CTCTGTTGCA TCCCAGCCAT CTTGGTCGTC
TTAGTAAGCT ACCGACAGTT TAAAGTACGC CAGGCTGAGT GCACGAAGAC CGCAAGAATT
CAGTCTGCTA TGCCTGCAGC CAAGCCTGCA GCTCCTGTAC CAGCTGCGCC TGCGCCGCCC
CCGCCCCCGC CACCACCACC ACCAGGAGCA CATCTCTATG AAGAACTGGG AGAGAGCGCA
ATGCATAAGT ATGAGATGCC CCAGTATGGA AGTCGCCGTC GACTGCTGCC ACCTGCTGGA
CAGGAGGAAT ACGGCGAAGT CATTGGTGAA GCTGAAGAGG AATATGAAGA AGAAGAGTGG
GCAAGAAAAA GAATGATCAA GTTGGTGGTC GATCGGGAGT ATGAGAGCAG CTCACCTGGG
GAAGACAGCG CTCCTGAGTC GCAGAGAAGC AGAACTCACA AGCCCAGTGG CCGCAGCAAT
GTCAACGGCA ACATCTACAT TGCGCAGAAT GGTTCCGTGG TGAGAACACG CCGTGCCTGC
GTCGCTGATA ACTTGAAGGT GCCCTCCCCT GGGTTGCTTG GGAGGCATCT GAAGAAATTA
GACACATTGG CAGGGACACG TGAAGAGAAT GTGCCCCTGA ACACACTGTT CAAGGGGCCA
TTTTCCACAG AGAAAGCGAA AAGAACCCCA ACTCTGGTCA CGTTTGCCCC GTGCCCCGTG
GTGGCTGAGC ACTCGGCAGT GAAGCCATCA GGGACCAGGC TGAAACACAC AGCTGAGCAG
GAGTCCATGG TAGACAGTAG GCTCTCCAGA GAGTCGATGG AATTCCACGG TGACAGCGCG
CCATCAGATG AGGAGGAGCT CTGGATGGGT CCGTGGAACA GCCTCCACAT ACCAATGACA
AAACTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13242
Clone ID Related Accession (Same CDS sequence) NM_001142747
Accession Version NM_001142747.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 3531bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform SI-1 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1 and AK139154.1. Transcript Variant: This variant (M) has a distinct 3' splice pattern, compared to variant A. The resulting isoform (SI-1), also known as protocadherin-15-secreted isoform 1, has a substantially shorter and distinct C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK139154.1, DQ354416.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGT CTGTCTGTGA TACCATGTTC ATGGAGAACC
CAGGTGTCAA AGTCTCTAGG ACTGGAGCTA GGGGTGCCTG TGAGCCACAG TGTGGAATCT
GGAACTAGAA CTGGGTCCTC TACAAGAGCA GCAAGTGTTC CTATCCACTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136219.1
CDS422..3952
Misc Feature(1)413..415(+)
Misc Feature(2)887..1156(+)
Misc Feature(3)908..1105(+)
Misc Feature(4)1277..1603(+)
Misc Feature(5)1298..1603(+)
Misc Feature(6)1631..1951(+)
Misc Feature(7)1652..1948(+)
Misc Feature(8)1973..2263(+)
Misc Feature(9)1994..2263(+)
Misc Feature(10)2297..2575(+)
Misc Feature(11)2315..2572(+)
Misc Feature(12)2600..2881(+)
Misc Feature(13)2621..2878(+)
Misc Feature(14)2903..3199(+)
Misc Feature(15)2924..3199(+)
Misc Feature(16)3224..3517(+)
Misc Feature(17)3245..3427(+)
Misc Feature(18)3569..>3763(+)
Misc Feature(19)3575..3730(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..527
Gene:Pcdh15
Gene Synonym:
Exon (4)528..593
Gene:Pcdh15
Gene Synonym:
Exon (5)594..754
Gene:Pcdh15
Gene Synonym:
Exon (6)755..910
Gene:Pcdh15
Gene Synonym:
Exon (7)911..1030
Gene:Pcdh15
Gene Synonym:
Exon (8)1031..1141
Gene:Pcdh15
Gene Synonym:
Exon (9)1142..1312
Gene:Pcdh15
Gene Synonym:
Exon (10)1313..1421
Gene:Pcdh15
Gene Synonym:
Exon (11)1422..1534
Gene:Pcdh15
Gene Synonym:
Exon (12)1535..1741
Gene:Pcdh15
Gene Synonym:
Exon (13)1742..1876
Gene:Pcdh15
Gene Synonym:
Exon (14)1877..2026
Gene:Pcdh15
Gene Synonym:
Exon (15)2027..2220
Gene:Pcdh15
Gene Synonym:
Exon (16)2221..2353
Gene:Pcdh15
Gene Synonym:
Exon (17)2354..2433
Gene:Pcdh15
Gene Synonym:
Exon (18)2434..2527
Gene:Pcdh15
Gene Synonym:
Exon (19)2528..2656
Gene:Pcdh15
Gene Synonym:
Exon (20)2657..2962
Gene:Pcdh15
Gene Synonym:
Exon (21)2963..3187
Gene:Pcdh15
Gene Synonym:
Exon (22)3188..3304
Gene:Pcdh15
Gene Synonym:
Exon (23)3305..3445
Gene:Pcdh15
Gene Synonym:
Exon (24)3446..3558
Gene:Pcdh15
Gene Synonym:
Exon (25)3559..3668
Gene:Pcdh15
Gene Synonym:
Exon (26)3669..3809
Gene:Pcdh15
Gene Synonym:
Exon (27)3810..4954
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142747
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant M, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142747

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GACTGGCAAT ACGAGGATTG CAAACTAGCT
AGGGGAGGAC CACCAGCTAC TATCGTGGCC ATTGATGAAG AGAGTCGAAA CGGTACAATT
CTGGTGGATA ACATGTTGAT TAAGGGGACT GCCGGAGGAC CAGACCCCAC CATAGAGCTC
TCTTTAAAGG ACAACGTGGA CTACTGGGTG TTGCTGGACC CCGTTAAACA GATGCTTTTC
CTGAACAGTA CCGGAAGAGT TCTGGATAGA GACCCACCAA TGAACATACA CTCCATTGTG
GTGCAAGTCC AGTGTGTCAA CAAGAAGGTT GGCACAGTTA TCTATCATGA AGTACGCATC
GTGGTGCGAG ATCGGAATGA CAACTCCCCC ACATTCAAGC ATGAAAGCTA CTATGCCACC
GTGAATGAGC TCACTCCAGT TGGCACCACG ATATTCACGG GGTTCTCGGG AGACAATGGA
GCTACAGACA TAGACGATGG CCCTAATGGA CAGATAGAAT ACGTGATTCA GTACAACCCA
GAAGATCCGA CATCCAACGA CACCTTTGAA ATTCCACTCA TGCTGACTGG CAACGTGGTA
CTGAGGAAAA GACTCAACTA TGAGGATAAG ACTCGCTACT ATGTCATCAT CCAAGCAAAT
GACCGTGCAC AAAATCTGAA TGAGAGGCGA ACAACCACCA CCACCCTCAC AGTAGATGTT
CTAGATGGAG ATGACCTGGG ACCTATGTTT CTGCCTTGTG TTCTTGTGCC AAACACACGT
GACTGTCGTC CACTCACCTA CCAAGCTGCC ATTCCTGAAC TGAGGACTCC GGAAGAACTG
AACCCTATTT TGGTGACACC ACCTATCCAA GCCATTGATC AGGACCGAAA CATCCAACCA
CCATCTGATC GACCTGGCAT CCTCTACTCC ATCCTTGTCG GCACCCCTGA GGATTACCCC
CGCTTCTTCC ATATGCATCC CAGGACTGCA GAACTCACTC TCCTGGAGCC AGTAAACAGA
GACTTCCATC AAAAATTTGA TTTGGTTATT AAGGCTGAGC AGGACAATGG CCACCCACTT
CCTGCCTTTG CTAGTCTGCA CATCGAAATA CTAGACGAAA ACAATCAGAG TCCATACTTC
ACAATGCCCA GCTATCAAGG ATACATCCTG GAATCCGCCC CAGTGGGAGC CACCATTTCT
GAGAGCCTAA ACTTAACCAC TCCTCTGAGA ATTGTAGCTC TGGACAAAGA CATAGAAGAC
ACAAAAGATC CAGAGCTCCA CCTCTTCCTG AATGACTACA CCTCGGTCTT CACTGTGACA
CCCACTGGTA TCACCCGCTA CCTCACCCTG CTTCAACCTG TGGACAGGGA GGAACAGCAA
ACCTACACCT TTCTGATAAC AGCGTTTGAT GGCGTGCAAG AAAGTGAGCC AGTCGTGGTC
AATATCCGAG TGATGGATGC AAATGATAAC ACGCCCACCT TCCCTGAAAT CTCCTATGAT
GTCTATGTTT ACACAGACAT GAGTCCTGGG GACAGCGTCA TTCAGCTGAC AGCGGTAGAT
GCTGATGAAG GCTCTAATGG GGAGATCTCC TATGAAATAC TGGTGGGGGG CAAGGGAGAC
TTCGTGATCA ACAAGACCAC AGGGCTGGTG AGCATTGCAC CAGGCGTGGA GCTGATCGTG
GGACAGACGT ATGCGCTCAC AGTGCAGGCT TCGGACAACG CCCCGCCTGC AGAAAGAAGG
CACTCCATCT GCACAGTGTA CATCGAGGTG CTTCCTCCTA ACAACCAGAG CCCTCCCCGC
TTCCCGCAGC TGATGTACAG TCTGGAAGTC AGCGAGGCCA TGAGGATCGG TGCTATTTTA
TTAAATCTAC AGGCAACTGA TCGAGAGGGA GATCCAATCA CATATGCCAT CGAGAATGGA
GACCCTCAGA GAGTTTTTAA TCTTTCAGAA ACCACAGGGA TTCTCAGCCT AGGGAAGGCT
CTAGACCGCG AGAGCACAGA CCGCTACATC CTCATCGTCA CAGCCTCAGA TGGCAGACCG
GATGGAACCT CAACTGCCAC TGTGAACATA GTGGTGACGG ACGTCAATGA CAACGCTCCC
GTGTTCGATC CCTATCTGCC CAGGAACCTC TCTGTGGTGG AGGAAGAAGC CAATGCCTTT
GTGGGTCAAG TCCGGGCAAC AGACCCAGAT GCTGGGATAA ACGGCCAAGT TCACTACAGC
CTGGGGAACT TCAACAACCT CTTCCGCATC ACATCCAACG GGAGCATTTA CACAGCCGTG
AAGCTGAACA GGGAAGCCAG GGACCACTAT GAACTGGTTG TCGTGGCAAC AGATGGAGCA
GTCCACCCTC GACATTCAAC TCTGACACTG TACATCAAGG TGTTGGACAT TGATGATAAC
AGTCCTGTTT TTACCAATTC AACGTACACA GTTGTCGTTG AAGAGAATCT GCCAGCCGGG
ACCTCCTTTC TTCAAATAGA GGCCAAGGAT GTTGACCTTG GAGCCAATGT GTCATATCGG
ATCAGAAGCC CAGAAGTGAA ACACCTTTTT GCACTGCATC CATTCACTGG AGAATTGTCT
CTTCTGAGGA GTTTGGATTA TGAGGCCTTT CCGGACCAGG AGGCAAGCAT CACATTCTTG
GTGGAGGCCT TTGACATTTA TGGGACTATG CCACCTGGTA TAGCAACAGT CACGGTAATT
GTGAAGGACA TGAATGACTA CCCTCCAGTG TTTAGCAAAC GCATCTACAA GGGGATGGTG
GCTCCAGATG CAGTCAAGGG GACACCAATC ACCACCGTTT ATGCTGAAGA TGCGGACCCA
CCTGGGATGC CTGCAAGTAG GGTGAGGTAT CGAGTGGACG ACGTGCAGTT TCCATACCCA
GCCAGTATTT TTGATGTAGA GGAAGATTCT GGAAGAGTAG TAACCCGCGT CAATCTTAAT
GAAGAGCCTA CTACGATTTT CAAGCTGGTG GTTGTGGCTT TTGATGACGG CGAACCTGTG
ATGTCCAGCA GTGCCACGGT GAGAATTCTT GTCTTACATC CTGGAGAGAT CCCACGCTTC
ACCCAAGAGG AATACAGACC TCCTCCTGTA AGTGAGCTTG CGGCCAGAGG GACTGTAGTT
GGTGTCATTT CTGCTGCTGC CATTAATCAG AGCATCGTGT ACTCCATTGT GGCAGGAAAT
GAGGAAGACA AGTTTGGAAT CAACAATGTC ACTGGGGTCA TCTATGTGAA TTCACCATTG
GATTACGAGA CAAGGACCAG CTATGTGCTC CGGGTACAAG CAGATTCTCT GGAAGTGGTC
CTTGCCAATC TCCGAGTCCC TTCAAAAAGT CTGTCTGTGA TACCATGTTC ATGGAGAACC
CAGGTGTCAA AGTCTCTAGG ACTGGAGCTA GGGGTGCCTG TGAGCCACAG TGTGGAATCT
GGAACTAGAA CTGGGTCCTC TACAAGAGCA GCAAGTGTTC CTATCCACTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13222
Clone ID Related Accession (Same CDS sequence) NM_001142748
Accession Version NM_001142748.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 3516bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform SI-2 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1 and DQ354417.1. On or before Sep 29, 2009 this sequence version replaced gi:94388352, gi:94388270. Transcript Variant: This variant (N) lacks an alternate in-frame exon in the 5' coding region and has a distinct 3' splice pattern, compared to variant A. The resulting isoform (SI-2), also known as protocadherin-15-secreted isoform 2, lacks a 5-aa segment near the N-terminus and has a substantially shorter and distinct C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354417.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGTCTGTC TGTGATACCA TGTTCATGGA GAACCCAGGT GTCAAAGTCT
CTAGGACTGG AGCTAGGGGT GCCTGTGAGC CACAGTGTGG AATCTGGAAC TAGAACTGGG
TCCTCTACAA GAGCAGCAAG TGTTCCTATC CACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136220.1
CDS422..3937
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..>3748(+)
Misc Feature(19)3560..3715(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..4939
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142748
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant N, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142748

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGTCTGTC TGTGATACCA TGTTCATGGA GAACCCAGGT GTCAAAGTCT
CTAGGACTGG AGCTAGGGGT GCCTGTGAGC CACAGTGTGG AATCTGGAAC TAGAACTGGG
TCCTCTACAA GAGCAGCAAG TGTTCCTATC CACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu13136
Clone ID Related Accession (Same CDS sequence) NM_001142760
Accession Version NM_001142760.1 Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 5034bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 15-FEB-2015
Organism Mus musculus (house mouse)
Product protocadherin-15 isoform CD3-2 precursor
Comment VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ166718.1, DQ354414.1, AK139154.1, AC153858.3 and CO433511.1. Transcript Variant: This variant (L) lacks an alternate in-frame exon in the 5' coding region and has a distinct 3' splice pattern, compared to variant A. The resulting isoform (CD3-2), also known as protocadherin-15-CD3 isoform 2, lacks a 5-aa segment near the N-terminus and has a distinct and longer C-terminus, compared to isoform CD1-1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DQ354414.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01164131, SAMN01164132 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAAGTATGAG
ATGCCCCAGT ATGGAAGTCG CCGTCGACTG CTGCCACCTG CTGGACAGGA GGAATACGGC
GAAGTCATTG GTGAAGCTGA AGAGGAATAT GAAGAAGAAG AGTGGGCAAG AAAAAGAATG
ATCAAGTTGG TGGTCGATCG GGAGTATGAG AGCAGCTCAC CTGGGGAAGA CAGCGCTCCT
GAGTCGCAGA GAAGCAGAAC TCACAAGCCC AGTGGCCGCA GCAATGTCAA CGGCAACATC
TACATTGCGC AGAATGGTTC CGTGGTGAGA ACACGCCGTG CCTGCGTCGC TGATAACTTG
AAGGTGCCCT CCCCTGGGTT GCTTGGGAGG CATCTGAAGA AATTAGACAC ATTGGCAGGG
ACACGTGAAG AGAATGTGCC CCTGAACACA CTGTTCAAGG GGCCATTTTC CACAGAGAAA
GCGAAAAGAA CCCCAACTCT GGTCACGTTT GCCCCGTGCC CCGTGGTGGC TGAGCACTCG
GCAGTGAAGC CATCAGGGAC CAGGCTGAAA CACACAGCTG AGCAGGAGTC CATGGTAGAC
AGTAGGCTCT CCAGAGAGTC GATGGAATTC CACGGTGACA GCGCGCCATC AGATGAGGAG
GAGCTCTGGA TGGGTCCGTG GAACAGCCTC CACATACCAA TGACAAAACT CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001136232.1
CDS422..5455
Misc Feature(1)413..415(+)
Misc Feature(2)872..1141(+)
Misc Feature(3)893..1090(+)
Misc Feature(4)1262..1588(+)
Misc Feature(5)1283..1588(+)
Misc Feature(6)1616..1936(+)
Misc Feature(7)1637..1933(+)
Misc Feature(8)1958..2248(+)
Misc Feature(9)1979..2248(+)
Misc Feature(10)2282..2560(+)
Misc Feature(11)2300..2557(+)
Misc Feature(12)2585..2866(+)
Misc Feature(13)2606..2863(+)
Misc Feature(14)2888..3184(+)
Misc Feature(15)2909..3184(+)
Misc Feature(16)3209..3502(+)
Misc Feature(17)3230..3412(+)
Misc Feature(18)3554..3841(+)
Misc Feature(19)3560..3838(+)
Misc Feature(20)3866..4150(+)
Misc Feature(21)3884..4060(+)
Misc Feature(22)4550..4612(+)
Exon (1)1..393
Gene:Pcdh15
Gene Synonym:
Exon (2)394..512
Gene:Pcdh15
Gene Synonym:
Exon (3)513..578
Gene:Pcdh15
Gene Synonym:
Exon (4)579..739
Gene:Pcdh15
Gene Synonym:
Exon (5)740..895
Gene:Pcdh15
Gene Synonym:
Exon (6)896..1015
Gene:Pcdh15
Gene Synonym:
Exon (7)1016..1126
Gene:Pcdh15
Gene Synonym:
Exon (8)1127..1297
Gene:Pcdh15
Gene Synonym:
Exon (9)1298..1406
Gene:Pcdh15
Gene Synonym:
Exon (10)1407..1519
Gene:Pcdh15
Gene Synonym:
Exon (11)1520..1726
Gene:Pcdh15
Gene Synonym:
Exon (12)1727..1861
Gene:Pcdh15
Gene Synonym:
Exon (13)1862..2011
Gene:Pcdh15
Gene Synonym:
Exon (14)2012..2205
Gene:Pcdh15
Gene Synonym:
Exon (15)2206..2338
Gene:Pcdh15
Gene Synonym:
Exon (16)2339..2418
Gene:Pcdh15
Gene Synonym:
Exon (17)2419..2512
Gene:Pcdh15
Gene Synonym:
Exon (18)2513..2641
Gene:Pcdh15
Gene Synonym:
Exon (19)2642..2947
Gene:Pcdh15
Gene Synonym:
Exon (20)2948..3172
Gene:Pcdh15
Gene Synonym:
Exon (21)3173..3289
Gene:Pcdh15
Gene Synonym:
Exon (22)3290..3430
Gene:Pcdh15
Gene Synonym:
Exon (23)3431..3543
Gene:Pcdh15
Gene Synonym:
Exon (24)3544..3653
Gene:Pcdh15
Gene Synonym:
Exon (25)3654..3794
Gene:Pcdh15
Gene Synonym:
Exon (26)3795..3922
Gene:Pcdh15
Gene Synonym:
Exon (27)3923..4138
Gene:Pcdh15
Gene Synonym:
Exon (28)4139..4227
Gene:Pcdh15
Gene Synonym:
Exon (29)4228..4404
Gene:Pcdh15
Gene Synonym:
Exon (30)4405..4623
Gene:Pcdh15
Gene Synonym:
Exon (31)4624..4632
Gene:Pcdh15
Gene Synonym:
Exon (32)4633..4788
Gene:Pcdh15
Gene Synonym:
Exon (33)4789..4794
Gene:Pcdh15
Gene Synonym:
Exon (34)4795..4903
Gene:Pcdh15
Gene Synonym:
Exon (35)4904..9120
Gene:Pcdh15
Gene Synonym:
Translation

Target ORF information:

RefSeq Version NM_001142760
Organism Mus musculus (house mouse)
Definition Mus musculus protocadherin 15 (Pcdh15), transcript variant L, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001142760

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
ATGTTCCTAC AGTTTGCTGT CTGGAAGTGT TTACCCCATG GGATCCTCAT TGCCTCTCTC 
TTGGTAGTCA GCTGGGGCCA GTATGACGAT GATTGCAAAC TAGCTAGGGG AGGACCACCA
GCTACTATCG TGGCCATTGA TGAAGAGAGT CGAAACGGTA CAATTCTGGT GGATAACATG
TTGATTAAGG GGACTGCCGG AGGACCAGAC CCCACCATAG AGCTCTCTTT AAAGGACAAC
GTGGACTACT GGGTGTTGCT GGACCCCGTT AAACAGATGC TTTTCCTGAA CAGTACCGGA
AGAGTTCTGG ATAGAGACCC ACCAATGAAC ATACACTCCA TTGTGGTGCA AGTCCAGTGT
GTCAACAAGA AGGTTGGCAC AGTTATCTAT CATGAAGTAC GCATCGTGGT GCGAGATCGG
AATGACAACT CCCCCACATT CAAGCATGAA AGCTACTATG CCACCGTGAA TGAGCTCACT
CCAGTTGGCA CCACGATATT CACGGGGTTC TCGGGAGACA ATGGAGCTAC AGACATAGAC
GATGGCCCTA ATGGACAGAT AGAATACGTG ATTCAGTACA ACCCAGAAGA TCCGACATCC
AACGACACCT TTGAAATTCC ACTCATGCTG ACTGGCAACG TGGTACTGAG GAAAAGACTC
AACTATGAGG ATAAGACTCG CTACTATGTC ATCATCCAAG CAAATGACCG TGCACAAAAT
CTGAATGAGA GGCGAACAAC CACCACCACC CTCACAGTAG ATGTTCTAGA TGGAGATGAC
CTGGGACCTA TGTTTCTGCC TTGTGTTCTT GTGCCAAACA CACGTGACTG TCGTCCACTC
ACCTACCAAG CTGCCATTCC TGAACTGAGG ACTCCGGAAG AACTGAACCC TATTTTGGTG
ACACCACCTA TCCAAGCCAT TGATCAGGAC CGAAACATCC AACCACCATC TGATCGACCT
GGCATCCTCT ACTCCATCCT TGTCGGCACC CCTGAGGATT ACCCCCGCTT CTTCCATATG
CATCCCAGGA CTGCAGAACT CACTCTCCTG GAGCCAGTAA ACAGAGACTT CCATCAAAAA
TTTGATTTGG TTATTAAGGC TGAGCAGGAC AATGGCCACC CACTTCCTGC CTTTGCTAGT
CTGCACATCG AAATACTAGA CGAAAACAAT CAGAGTCCAT ACTTCACAAT GCCCAGCTAT
CAAGGATACA TCCTGGAATC CGCCCCAGTG GGAGCCACCA TTTCTGAGAG CCTAAACTTA
ACCACTCCTC TGAGAATTGT AGCTCTGGAC AAAGACATAG AAGACACAAA AGATCCAGAG
CTCCACCTCT TCCTGAATGA CTACACCTCG GTCTTCACTG TGACACCCAC TGGTATCACC
CGCTACCTCA CCCTGCTTCA ACCTGTGGAC AGGGAGGAAC AGCAAACCTA CACCTTTCTG
ATAACAGCGT TTGATGGCGT GCAAGAAAGT GAGCCAGTCG TGGTCAATAT CCGAGTGATG
GATGCAAATG ATAACACGCC CACCTTCCCT GAAATCTCCT ATGATGTCTA TGTTTACACA
GACATGAGTC CTGGGGACAG CGTCATTCAG CTGACAGCGG TAGATGCTGA TGAAGGCTCT
AATGGGGAGA TCTCCTATGA AATACTGGTG GGGGGCAAGG GAGACTTCGT GATCAACAAG
ACCACAGGGC TGGTGAGCAT TGCACCAGGC GTGGAGCTGA TCGTGGGACA GACGTATGCG
CTCACAGTGC AGGCTTCGGA CAACGCCCCG CCTGCAGAAA GAAGGCACTC CATCTGCACA
GTGTACATCG AGGTGCTTCC TCCTAACAAC CAGAGCCCTC CCCGCTTCCC GCAGCTGATG
TACAGTCTGG AAGTCAGCGA GGCCATGAGG ATCGGTGCTA TTTTATTAAA TCTACAGGCA
ACTGATCGAG AGGGAGATCC AATCACATAT GCCATCGAGA ATGGAGACCC TCAGAGAGTT
TTTAATCTTT CAGAAACCAC AGGGATTCTC AGCCTAGGGA AGGCTCTAGA CCGCGAGAGC
ACAGACCGCT ACATCCTCAT CGTCACAGCC TCAGATGGCA GACCGGATGG AACCTCAACT
GCCACTGTGA ACATAGTGGT GACGGACGTC AATGACAACG CTCCCGTGTT CGATCCCTAT
CTGCCCAGGA ACCTCTCTGT GGTGGAGGAA GAAGCCAATG CCTTTGTGGG TCAAGTCCGG
GCAACAGACC CAGATGCTGG GATAAACGGC CAAGTTCACT ACAGCCTGGG GAACTTCAAC
AACCTCTTCC GCATCACATC CAACGGGAGC ATTTACACAG CCGTGAAGCT GAACAGGGAA
GCCAGGGACC ACTATGAACT GGTTGTCGTG GCAACAGATG GAGCAGTCCA CCCTCGACAT
TCAACTCTGA CACTGTACAT CAAGGTGTTG GACATTGATG ATAACAGTCC TGTTTTTACC
AATTCAACGT ACACAGTTGT CGTTGAAGAG AATCTGCCAG CCGGGACCTC CTTTCTTCAA
ATAGAGGCCA AGGATGTTGA CCTTGGAGCC AATGTGTCAT ATCGGATCAG AAGCCCAGAA
GTGAAACACC TTTTTGCACT GCATCCATTC ACTGGAGAAT TGTCTCTTCT GAGGAGTTTG
GATTATGAGG CCTTTCCGGA CCAGGAGGCA AGCATCACAT TCTTGGTGGA GGCCTTTGAC
ATTTATGGGA CTATGCCACC TGGTATAGCA ACAGTCACGG TAATTGTGAA GGACATGAAT
GACTACCCTC CAGTGTTTAG CAAACGCATC TACAAGGGGA TGGTGGCTCC AGATGCAGTC
AAGGGGACAC CAATCACCAC CGTTTATGCT GAAGATGCGG ACCCACCTGG GATGCCTGCA
AGTAGGGTGA GGTATCGAGT GGACGACGTG CAGTTTCCAT ACCCAGCCAG TATTTTTGAT
GTAGAGGAAG ATTCTGGAAG AGTAGTAACC CGCGTCAATC TTAATGAAGA GCCTACTACG
ATTTTCAAGC TGGTGGTTGT GGCTTTTGAT GACGGCGAAC CTGTGATGTC CAGCAGTGCC
ACGGTGAGAA TTCTTGTCTT ACATCCTGGA GAGATCCCAC GCTTCACCCA AGAGGAATAC
AGACCTCCTC CTGTAAGTGA GCTTGCGGCC AGAGGGACTG TAGTTGGTGT CATTTCTGCT
GCTGCCATTA ATCAGAGCAT CGTGTACTCC ATTGTGGCAG GAAATGAGGA AGACAAGTTT
GGAATCAACA ATGTCACTGG GGTCATCTAT GTGAATTCAC CATTGGATTA CGAGACAAGG
ACCAGCTATG TGCTCCGGGT ACAAGCAGAT TCTCTGGAAG TGGTCCTTGC CAATCTCCGA
GTCCCTTCAA AAAGCAATAC AGCTAAGGTG TACATTGAGA TTCAGGATGA AAACGATCAC
CCCCCAGTGT TCCAGAAGAA ATTCTACATT GGAGGTGTGT CTGAAGACGC AAGGATGTTC
GCATCTGTGC TCAGAGTGAA GGCCACCGAC AGGGACACGG GTAATTACAG TGCCATGGCC
TACCGGCTCA TCATACCGCC GATTAAAGAG GGCAAAGAGG GGTTTGTGGT GGAAACATAC
ACAGGTCTCA TCAAGACAGC CATGCTCTTC CACAATATGA GAAGATCCTA CTTCAAGTTT
CAAGTGATTG CAACTGACGA CTACGGGAAG GGGTTGAGCG GGAAAGCAGA CGTACTGGTC
TCCGTGGTCA ATCAACTGGA TATGCAGGTC ATTGTCTCCA ATGTGCCCCC TACACTAGTG
GAAAAGAAGA TAGAAGACCT TACAGAGATT TTGGATCGCT ACGTTCAGGA GCAAATTCCT
GGTGCCAAGG TTGTGGTGGA GTCCATAGGT GCCCGTCGCC ATGGAGACGC CTACTCCCTA
GAAGACTATA GCAAGTGCGA CCTGACTGTC TATGCCATCG ACCCGCAGAC CAACAGAGCC
ATCGACAGAA ATGAGCTTTT TAAGTTCCTG GACGGCAAAC TGCTCGATAT CAATAAAGAC
TTCCAGCCGT ATTACGGGGA AGGAGGGCGC ATTCTGGAGA TTCGGACACC TGAGGCAGTG
ACGAGCATCA AGAAGCGAGG AGAAAGCTTG GGGTACACAG AAGGGGCCTT GCTGGCCTTG
GCCTTCATCA TCATCCTCTG TTGCATCCCA GCCATCTTGG TCGTCTTAGT AAGCTACCGA
CAGTTTAAAG TACGCCAGGC TGAGTGCACG AAGACCGCAA GAATTCAGTC TGCTATGCCT
GCAGCCAAGC CTGCAGCTCC TGTACCAGCT GCGCCTGCGC CGCCCCCGCC CCCGCCACCA
CCACCACCAG GAGCACATCT CTATGAAGAA CTGGGAGAGA GCGCAATGCA TAAGTATGAG
ATGCCCCAGT ATGGAAGTCG CCGTCGACTG CTGCCACCTG CTGGACAGGA GGAATACGGC
GAAGTCATTG GTGAAGCTGA AGAGGAATAT GAAGAAGAAG AGTGGGCAAG AAAAAGAATG
ATCAAGTTGG TGGTCGATCG GGAGTATGAG AGCAGCTCAC CTGGGGAAGA CAGCGCTCCT
GAGTCGCAGA GAAGCAGAAC TCACAAGCCC AGTGGCCGCA GCAATGTCAA CGGCAACATC
TACATTGCGC AGAATGGTTC CGTGGTGAGA ACACGCCGTG CCTGCGTCGC TGATAACTTG
AAGGTGCCCT CCCCTGGGTT GCTTGGGAGG CATCTGAAGA AATTAGACAC ATTGGCAGGG
ACACGTGAAG AGAATGTGCC CCTGAACACA CTGTTCAAGG GGCCATTTTC CACAGAGAAA
GCGAAAAGAA CCCCAACTCT GGTCACGTTT GCCCCGTGCC CCGTGGTGGC TGAGCACTCG
GCAGTGAAGC CATCAGGGAC CAGGCTGAAA CACACAGCTG AGCAGGAGTC CATGGTAGAC
AGTAGGCTCT CCAGAGAGTC GATGGAATTC CACGGTGACA GCGCGCCATC AGATGAGGAG
GAGCTCTGGA TGGGTCCGTG GAACAGCCTC CACATACCAA TGACAAAACT CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

 
*
*
*
*